##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088196_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1473227 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.092673430503243 31.0 31.0 33.0 30.0 34.0 2 31.246649701641363 31.0 31.0 34.0 28.0 34.0 3 31.297032975909346 31.0 31.0 34.0 28.0 34.0 4 35.24377981125787 37.0 35.0 37.0 33.0 37.0 5 35.100910450324356 35.0 35.0 37.0 32.0 37.0 6 35.15912754789316 37.0 35.0 37.0 32.0 37.0 7 34.99417876539054 37.0 35.0 37.0 32.0 37.0 8 35.056778758466955 37.0 35.0 37.0 32.0 37.0 9 36.54730126450303 39.0 35.0 39.0 32.0 39.0 10 36.401646860938605 38.0 35.0 39.0 32.0 39.0 11 36.429607249935 38.0 35.0 39.0 32.0 39.0 12 36.28035937435303 38.0 35.0 39.0 32.0 39.0 13 36.33791194432359 38.0 35.0 39.0 32.0 39.0 14 37.26087629401307 39.0 36.0 41.0 32.0 41.0 15 37.335671963655294 39.0 36.0 41.0 32.0 41.0 16 37.299534287655604 39.0 36.0 41.0 32.0 41.0 17 37.38827689147701 39.0 36.0 41.0 32.0 41.0 18 37.41903929265483 39.0 36.0 41.0 32.0 41.0 19 37.51429752509287 39.0 36.0 41.0 32.0 41.0 20 37.47574677900962 39.0 36.0 41.0 32.0 41.0 21 37.35610533882423 39.0 36.0 41.0 31.0 41.0 22 37.31912800946494 39.0 36.0 41.0 31.0 41.0 23 37.214845370061774 39.0 36.0 41.0 31.0 41.0 24 37.12100986473911 39.0 36.0 41.0 31.0 41.0 25 37.03552609339905 39.0 36.0 40.0 31.0 41.0 26 36.77117579300406 39.0 35.0 40.0 31.0 41.0 27 36.590939481831384 38.0 35.0 40.0 30.0 41.0 28 36.43720214196455 38.0 35.0 40.0 30.0 41.0 29 36.2829658973125 38.0 35.0 40.0 30.0 41.0 30 36.108418458255244 38.0 35.0 40.0 30.0 41.0 31 35.84132927240677 38.0 34.0 40.0 29.0 41.0 32 35.53873367783783 38.0 34.0 40.0 28.0 41.0 33 35.659645797965965 38.0 34.0 40.0 29.0 41.0 34 35.633215383644206 38.0 34.0 40.0 28.0 41.0 35 35.53027537507798 38.0 34.0 40.0 27.0 41.0 36 35.43885158227483 38.0 34.0 40.0 27.0 41.0 37 35.281484794943346 38.0 34.0 40.0 26.0 41.0 38 35.14030560124136 38.0 34.0 40.0 25.0 41.0 39 35.051012505201165 38.0 34.0 40.0 25.0 41.0 40 34.8660498348184 38.0 34.0 40.0 24.0 41.0 41 34.709664566288836 38.0 33.0 40.0 23.0 41.0 42 34.481033133386774 38.0 33.0 40.0 22.0 41.0 43 34.150771062436405 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 5.0 15 4.0 16 13.0 17 53.0 18 122.0 19 262.0 20 559.0 21 1085.0 22 2028.0 23 3473.0 24 5745.0 25 9059.0 26 13746.0 27 20217.0 28 27443.0 29 36810.0 30 47125.0 31 57530.0 32 70721.0 33 85540.0 34 103218.0 35 124878.0 36 155298.0 37 201679.0 38 247716.0 39 258897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.835748326632626 23.423477848288147 14.63854518007069 22.10222864500854 2 17.38123181288423 23.654127978919746 36.319318068430725 22.64532213976529 3 20.07558916582441 25.842996361049586 32.57468129487173 21.506733178254265 4 13.440562791748997 16.32029551454053 35.33732411909366 34.901817574616814 5 11.161077009856593 40.825955538420075 34.60294985090553 13.410017600817797 6 31.328912652293234 36.262843404309045 15.48037064213458 16.927873301263148 7 23.881927225064434 35.776631842886395 21.81259235677869 18.52884857527048 8 27.135465206651794 34.080762842386136 20.588816251670654 18.19495569929142 9 24.991328559685645 14.18118185452751 24.660082933587287 36.16740665219956 10 16.373851415973235 28.54577061104636 33.998087192265686 21.082290780714715 11 30.84528046254922 22.400824855911548 25.211457568996497 21.542437112542736 12 19.671238716097385 28.28986978924497 31.9235257024206 20.115365792237043 13 30.39117529070537 21.770304236889494 29.233444676210794 18.60507579619434 14 20.36047397990941 23.675645368975726 29.253197233012973 26.710683418101894 15 22.679736388214444 29.714225981467894 27.34907790856399 20.256959721753674 16 21.095594908320304 28.721575154405944 28.17325503808985 22.0095748991839 17 18.60894485371229 28.038584685184293 28.983992283605986 24.368478177497426 18 19.45518239891069 27.24271276592134 33.356706060912536 19.945398774255427 19 18.962997555705943 26.023009352937464 34.75560792735946 20.25838516399713 20 23.029716398083934 24.9622088109979 33.4132486032363 18.59482618768187 21 22.46693822472708 25.728689468764827 32.01577217903283 19.788600127475263 22 20.680994850080808 25.65789250400651 32.88298408867065 20.778128557242027 23 20.014023636547524 27.478996787324693 33.635821227821644 18.871158348306132 24 18.738320706856445 26.79288392080786 32.31667624880619 22.152119123529506 25 19.716241964069354 27.603485409919852 33.371842899974006 19.30842972603679 26 20.997646662734258 26.532910406882305 32.162117582694314 20.30732534768912 27 19.911866942433175 27.71419475749494 31.762382850708004 20.61155544936388 28 19.661056985786985 27.51341103577385 31.82197991212488 21.00355206631429 29 18.68476480542374 27.29178870601747 32.83825235350697 21.18519413505183 30 18.32969393039905 27.370255907609618 34.684878840803215 19.615171321188114 31 19.58829155316866 26.734101397815813 33.574866602363386 20.102740446652145 32 20.290355797171785 27.308011596312042 31.763333145536976 20.638299460979198 33 21.25531231778945 27.12351864308759 31.31275764020073 20.308411398922228 34 19.779165057387626 29.277633385757934 31.37778495778315 19.565416599071288 35 18.419496791736776 29.899058325702693 31.631717311724532 20.049727570835994 36 19.346577275599756 26.71102280911224 33.576699313819255 20.36570060146875 37 19.202879121818974 26.750256409908317 32.956360425107604 21.090504043165108 38 19.616325250623294 26.455461378321193 33.45859124221861 20.4696221288369 39 20.537703965512442 25.825008637501213 33.41433465446941 20.222952742516938 40 18.97867742038396 26.42647738603759 32.86221335883744 21.732631834741014 41 19.503511678784058 25.96816376566544 32.62782992709202 21.900494628458482 42 17.27445940102917 27.48911063943303 32.93531818246611 22.301111777071693 43 17.767323026254612 27.232123766398526 32.67948523886678 22.32106796848008 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 156.0 1 245.5 2 335.0 3 831.5 4 1328.0 5 1328.0 6 2304.5 7 3281.0 8 3645.0 9 4009.0 10 5971.0 11 7933.0 12 7933.0 13 14125.5 14 20318.0 15 32141.5 16 43965.0 17 42920.5 18 41876.0 19 41876.0 20 45334.0 21 48792.0 22 40100.5 23 31409.0 24 34029.5 25 36650.0 26 36650.0 27 39670.0 28 42690.0 29 43903.5 30 45117.0 31 48816.0 32 52515.0 33 52515.0 34 55879.0 35 59243.0 36 62936.0 37 66629.0 38 68445.0 39 70261.0 40 70261.0 41 73106.5 42 75952.0 43 85068.0 44 94184.0 45 117843.5 46 141503.0 47 141503.0 48 142840.0 49 144177.0 50 130215.5 51 116254.0 52 106006.5 53 95759.0 54 95759.0 55 83389.5 56 71020.0 57 58574.0 58 46128.0 59 40403.5 60 34679.0 61 34679.0 62 30052.0 63 25425.0 64 21469.5 65 17514.0 66 14976.0 67 12438.0 68 12438.0 69 10314.5 70 8191.0 71 6968.0 72 5745.0 73 4549.0 74 3353.0 75 3353.0 76 2739.0 77 2125.0 78 1627.0 79 1129.0 80 874.0 81 619.0 82 619.0 83 423.5 84 228.0 85 185.5 86 143.0 87 121.0 88 99.0 89 99.0 90 70.0 91 41.0 92 25.0 93 9.0 94 5.5 95 2.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1473227.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.83959965611457 #Duplication Level Percentage of deduplicated Percentage of total 1 72.08214142613133 30.87970081050897 2 13.986032298936934 11.98312048927892 3 5.659382799297285 7.2733708026779 4 2.7625350640480084 4.733835847191819 5 1.53539042048463 3.288775546469748 6 0.9226037643402605 2.3714385543336616 7 0.6022522936421926 1.8060173006125797 8 0.40927095672607894 1.402640314961617 9 0.2977217908877378 1.147885409747893 >10 1.532290097965085 11.930947791773757 >50 0.12472722352038802 3.671500361239974 >100 0.06826631795607598 5.78217193593452 >500 0.009091524088551638 2.6836349264633848 >1k 0.007337019439883779 5.911786383263797 >5k 4.7850126781850727E-4 1.3110350944380131 >10k+ 4.7850126781850727E-4 3.8221384311033066 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20405 1.385054713224778 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19342 1.312900184425075 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16190 1.0989480915025316 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7165 0.4863473178267843 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6926 0.47012442753221334 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5096 0.3459073177453305 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4382 0.2974422814678254 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4253 0.2886859934008812 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4006 0.2719200774897555 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3545 0.2406282263357921 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3455 0.23451918814955197 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3221 0.21863568886532758 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3156 0.21422360573082086 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2833 0.19229894646242568 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2750 0.1866650556906709 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2629 0.17845179324028135 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2569 0.1743791011161213 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2490 0.16901672315264382 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2326 0.1578846980132729 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2225 0.15102899960427008 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2014 0.13670669896764043 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1774 0.12041593047100005 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1658 0.11254205903095721 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1652 0.1121347898185412 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1615 0.10962329634197582 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1611 0.10935178353369847 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1594 0.10819785409851977 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1479 0.10039186086054626 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 6.787820206933487E-5 0.0 13 0.0 0.0 0.0 2.715128082773395E-4 0.0 14 0.0 0.0 0.0 4.751474144853441E-4 0.0 15 0.0 0.0 0.0 0.001086051233109358 0.0 16 0.0 0.0 0.0 0.001561198647594702 0.0 17 0.0 0.0 0.0 0.00251149347656539 0.0 18 0.0 0.0 0.0 0.0028508844869120646 0.0 19 0.0 0.0 0.0 0.003936935720021423 0.0 20 0.0 0.0 0.0 0.004887230548992111 0.0 21 0.0 0.0 0.0 0.006312672792448143 0.0 22 0.0 0.0 0.0 0.01045324311867757 0.0 23 0.0 0.0 0.0 0.017648332538027067 0.0 24 0.0 0.0 0.0 0.028237332060843306 0.0 25 0.0 0.0 0.0 0.03685786372364883 0.0 26 0.0 0.0 0.0 0.05131592076441716 0.0 27 0.0 0.0 0.0 0.16141436452087832 0.0 28 0.0 0.0 0.0 0.27633216062426225 0.0 29 0.0 0.0 0.0 0.3949153796393903 0.0 30 0.0 0.0 0.0 0.6311315228406756 0.0 31 0.0 0.0 0.0 0.9776497444046301 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4390 0.0 31.015944 1 CTAACGC 25 0.0054968395 29.6 3 TATACCG 85 1.9772415E-9 23.941177 5 TTACGCT 40 0.001931444 23.125 4 GTATTGG 280 0.0 18.5 1 GTTATCA 170 0.0 18.5 1 GTATCAA 7495 0.0 18.265509 2 GCCGATC 85 2.7239592E-5 17.411764 8 ACGGTGT 85 2.7239592E-5 17.411764 29 TATAGTG 160 3.45608E-11 17.34375 5 ATTGGAC 360 0.0 16.958334 3 CCGATAC 80 3.3833747E-4 16.1875 3 GCCGATA 80 3.3833747E-4 16.1875 2 TTGGACC 605 0.0 15.900826 4 ACCGACC 140 3.4748155E-8 15.857143 8 TACCGAC 250 0.0 15.54 7 AAGTACG 75 0.0041051353 14.8 35 CCGACCG 150 8.105053E-8 14.8 9 AGGGGTA 100 1.09369576E-4 14.8 5 CCGCCGG 140 5.9976264E-7 14.535715 13 >>END_MODULE