##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088195_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 791284 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.044780382264776 31.0 31.0 33.0 28.0 34.0 2 31.193723113319617 31.0 31.0 34.0 28.0 34.0 3 31.235775018830154 31.0 31.0 34.0 28.0 34.0 4 35.2034958371457 37.0 35.0 37.0 33.0 37.0 5 35.07274884870666 35.0 35.0 37.0 32.0 37.0 6 35.13464571506564 37.0 35.0 37.0 32.0 37.0 7 34.95737181593461 36.0 35.0 37.0 32.0 37.0 8 35.0297920847635 37.0 35.0 37.0 32.0 37.0 9 36.48910631328322 38.0 35.0 39.0 32.0 39.0 10 36.349523053669735 38.0 35.0 39.0 32.0 39.0 11 36.39402540680717 38.0 35.0 39.0 32.0 39.0 12 36.217316412312144 38.0 35.0 39.0 32.0 39.0 13 36.27641150332877 38.0 35.0 39.0 32.0 39.0 14 37.17100055100318 39.0 36.0 41.0 31.0 41.0 15 37.232471527289825 39.0 36.0 41.0 32.0 41.0 16 37.20019487314289 39.0 36.0 41.0 32.0 41.0 17 37.32070407085193 39.0 36.0 41.0 32.0 41.0 18 37.3572345706472 39.0 36.0 41.0 32.0 41.0 19 37.46824654611998 39.0 36.0 41.0 32.0 41.0 20 37.429987210660144 39.0 36.0 41.0 32.0 41.0 21 37.302948119764835 39.0 36.0 41.0 31.0 41.0 22 37.266091567629324 39.0 36.0 41.0 31.0 41.0 23 37.146662892210635 39.0 36.0 40.0 31.0 41.0 24 37.061631474919245 39.0 36.0 40.0 31.0 41.0 25 36.979605299740676 39.0 35.0 40.0 31.0 41.0 26 36.69146223100682 38.0 35.0 40.0 30.0 41.0 27 36.51086209249776 38.0 35.0 40.0 30.0 41.0 28 36.34544866318541 38.0 35.0 40.0 30.0 41.0 29 36.19853048968512 38.0 35.0 40.0 30.0 41.0 30 36.002159780811944 38.0 35.0 40.0 30.0 41.0 31 35.70387370400513 38.0 34.0 40.0 29.0 41.0 32 35.39802649870337 38.0 34.0 40.0 27.0 41.0 33 35.50986118763933 38.0 34.0 40.0 28.0 41.0 34 35.46533482289544 38.0 34.0 40.0 27.0 41.0 35 35.355426117550714 38.0 34.0 40.0 27.0 41.0 36 35.24909008649233 38.0 34.0 40.0 26.0 41.0 37 35.089840057425654 38.0 34.0 40.0 25.0 41.0 38 34.933609171928154 38.0 34.0 40.0 25.0 41.0 39 34.83440458798611 38.0 33.0 40.0 24.0 41.0 40 34.62465562301272 38.0 33.0 40.0 23.0 41.0 41 34.45092154018026 38.0 33.0 40.0 22.0 41.0 42 34.195297769195385 38.0 33.0 40.0 21.0 41.0 43 33.849448491312856 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 2.0 16 6.0 17 26.0 18 66.0 19 125.0 20 308.0 21 602.0 22 1053.0 23 1858.0 24 3176.0 25 5081.0 26 7706.0 27 11060.0 28 15637.0 29 20609.0 30 26200.0 31 31890.0 32 38761.0 33 47865.0 34 57185.0 35 68539.0 36 84731.0 37 110646.0 38 131176.0 39 126974.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.981725903721035 23.477790527800384 14.907289923718917 21.633193644759658 2 17.315780427760448 23.557407959721164 36.48184469798454 22.644966914533846 3 20.025806158092415 25.821196940668585 33.00028813927743 21.152708761961573 4 13.232417185233114 15.960135678214144 35.08184166493952 35.72560547161323 5 10.789046663397718 41.16600360932358 34.46866106227347 13.576288665005231 6 31.411983560895962 35.90000556058255 15.25722749354214 17.43078338497935 7 23.635256115377032 36.52961515713701 21.2400351833223 18.595093544163664 8 27.583143346762984 33.80644623169431 20.232811481086436 18.37759894045627 9 24.995576809337734 13.925088842943872 24.84518832682071 36.234146020897676 10 16.505199144681303 28.465380318570826 33.72809256853418 21.301327968213688 11 30.614798226679675 22.1381956415143 25.530530125719714 21.71647600608631 12 19.890582900703162 28.381466072863855 31.771273019547973 19.956678006885014 13 30.871216908215004 21.509723436844418 29.60744814756775 18.011611507372827 14 20.53864352116307 23.440509349361292 29.40195934708651 26.618887782389127 15 22.659879385909484 29.579645234833514 27.726075593592185 20.03439978566482 16 21.092047861450503 28.704990875589548 28.248643976119826 21.954317286840123 17 18.464040723684544 27.846386379605804 28.89013299902437 24.79943989768528 18 19.40516931973855 27.044272347222993 33.80619347794218 19.744364855096276 19 18.80500553530717 25.43536833804298 35.476769402641786 20.28285672400807 20 23.341935386030805 24.307201965413178 34.05705157693066 18.293811071625356 21 22.880280657766363 25.207889961126472 32.39936609358966 19.512463287517505 22 20.660344452813405 25.10779947528321 33.49568549345115 20.73617057845224 23 19.894121453232973 27.35098902543208 34.33697635741403 18.417913163920918 24 18.30101455356105 26.321902123637024 32.79100803251424 22.586075290287685 25 19.51612821692338 27.366786134940174 34.26658443744597 18.850501210690474 26 21.09520728335212 26.198305538845723 32.53130355220124 20.175183625600923 27 19.65602741872703 27.836149852644564 32.08355028030391 20.424272448324494 28 19.517771116312222 27.275794784173574 32.190085986826475 21.016348112687734 29 18.383033146127055 27.079784249397182 33.36084136669009 21.176341237785675 30 17.83190358960879 27.194534452863955 35.595058158638366 19.378503798888893 31 19.312155938954913 26.663246065887847 34.09976696104054 19.924831034116703 32 20.300675863533193 27.122373256630993 32.048291131881854 20.52865974795396 33 21.485964584144252 26.94911055954626 31.34614120846624 20.218783647843253 34 19.675868588269193 29.735973430525576 31.435489659844002 19.15266832136123 35 18.04484862577785 30.567533275031465 31.694562255776688 19.693055843413994 36 19.15898716516447 26.612316184833762 33.96808225618109 20.260614393820674 37 19.068501321902122 27.002567978121633 33.07687252617265 20.852058173803588 38 19.542667360896974 26.566315001946204 33.72240560911127 20.16861202804556 39 20.72934622714474 25.89575929754677 33.4990976691049 19.87579680620359 40 18.81915974542642 26.65414693081119 32.73338017702873 21.793313146733663 41 19.57704187118658 26.135748985193686 32.58943691519101 21.69777222842873 42 17.005398820145484 27.92347627400529 33.00584872182428 22.065276184024952 43 17.60998579523913 27.501377507949105 32.82753094969695 22.061105747114816 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 108.0 1 139.0 2 170.0 3 439.5 4 709.0 5 709.0 6 1222.0 7 1735.0 8 2006.0 9 2277.0 10 3265.0 11 4253.0 12 4253.0 13 7760.0 14 11267.0 15 18310.0 16 25353.0 17 24541.5 18 23730.0 19 23730.0 20 25556.0 21 27382.0 22 21971.0 23 16560.0 24 17811.0 25 19062.0 26 19062.0 27 20434.5 28 21807.0 29 22178.5 30 22550.0 31 23990.5 32 25431.0 33 25431.0 34 27402.0 35 29373.0 36 32081.0 37 34789.0 38 35577.5 39 36366.0 40 36366.0 41 37976.5 42 39587.0 43 45522.5 44 51458.0 45 66140.5 46 80823.0 47 80823.0 48 82063.5 49 83304.0 50 74762.5 51 66221.0 52 60073.0 53 53925.0 54 53925.0 55 46489.5 56 39054.0 57 31003.5 58 22953.0 59 19521.5 60 16090.0 61 16090.0 62 13937.0 63 11784.0 64 10193.0 65 8602.0 66 7014.5 67 5427.0 68 5427.0 69 4580.0 70 3733.0 71 3023.5 72 2314.0 73 1826.0 74 1338.0 75 1338.0 76 1053.5 77 769.0 78 612.5 79 456.0 80 362.5 81 269.0 82 269.0 83 201.0 84 133.0 85 100.0 86 67.0 87 53.5 88 40.0 89 40.0 90 25.5 91 11.0 92 7.0 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 791284.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.12355639825969 #Duplication Level Percentage of deduplicated Percentage of total 1 77.83342615799138 36.677878472258875 2 12.011196036057468 11.320205476314147 3 4.233045853878179 5.984285250949431 4 1.886597496839077 3.5561273417244723 5 0.9986401701423616 2.352973818963562 6 0.6121796333876852 1.7308848887886314 7 0.4222621621834698 1.3928946370152673 8 0.28633519151205195 1.0794506036819733 9 0.23643438108291234 1.0027466002303418 >10 1.3005322287155374 11.353517084192967 >50 0.09101385069775347 2.997054522440745 >100 0.06959872046419027 6.458311117233603 >500 0.012313619774376356 4.090591681494075 >1k 0.005621435114389206 5.7188560648888425 >5k 2.67687386399486E-4 1.2560139809003488 >10k+ 5.35374772798972E-4 3.028208458922745 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12198 1.5415451342375177 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11808 1.492258152572275 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9957 1.2583345549764686 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4752 0.600542915059574 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3953 0.4995677910838586 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3347 0.4229834041886352 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2961 0.37420193002765123 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2887 0.36485004119886155 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2711 0.34260771101147 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2348 0.29673290499997473 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2316 0.2926888449659035 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2122 0.2681717310093468 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2101 0.2655178166119876 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1827 0.23089055257025293 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1819 0.22987953756173513 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1680 0.2123131517887383 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1529 0.1932302435029648 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1500 0.18956531409708777 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1468 0.18552125406301656 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1348 0.17035602893524956 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1344 0.16985052143099066 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1165 0.14722906061540483 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1100 0.1390145636711977 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1058 0.13370673487647924 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 985 0.12448122292375431 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 966 0.12208006227852453 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 961 0.12144817789820089 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 956 0.12081629351787727 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 923 0.11664585660774135 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 915 0.11563484159922355 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 911 0.11512933409496465 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 907 0.11462382659070573 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 901 0.1138655653343174 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 817 0.10324990774488046 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 816 0.10312353086881575 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 814 0.1028707771166863 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 802 0.1013542546039096 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.2637687606472517E-4 0.0 0.0 0.0 0.0 7 1.2637687606472517E-4 0.0 0.0 0.0 0.0 8 1.2637687606472517E-4 0.0 0.0 0.0 0.0 9 1.2637687606472517E-4 0.0 0.0 0.0 0.0 10 1.2637687606472517E-4 0.0 0.0 0.0 0.0 11 1.2637687606472517E-4 0.0 0.0 0.0 0.0 12 1.2637687606472517E-4 0.0 0.0 3.7913062819417554E-4 0.0 13 2.5275375212945034E-4 0.0 0.0 6.318843803236259E-4 0.0 14 2.5275375212945034E-4 0.0 0.0 0.0011373918845825266 0.0 15 2.5275375212945034E-4 0.0 0.0 0.0020220300170356027 0.0 16 2.5275375212945034E-4 0.0 0.0 0.0030330450255534043 0.0 17 2.5275375212945034E-4 0.0 0.0 0.004928698166524282 0.0 18 2.5275375212945034E-4 0.0 0.0 0.006192466927171534 0.0 19 2.5275375212945034E-4 0.0 0.0 0.0073298588117540605 0.0 20 2.5275375212945034E-4 0.0 0.0 0.009225511952724938 0.0 21 2.5275375212945034E-4 0.0 0.0 0.011753049474019442 0.0 22 2.5275375212945034E-4 0.0 0.0 0.017060878268737898 0.0 23 2.5275375212945034E-4 0.0 0.0 0.025528128965074486 0.0 24 2.5275375212945034E-4 0.0 0.0 0.03905045470400008 0.0 25 2.5275375212945034E-4 0.0 0.0 0.04562205225936579 0.0 26 2.5275375212945034E-4 0.0 0.0 0.05901800112222666 0.0 27 2.5275375212945034E-4 0.0 0.0 0.15594906506387088 0.0 28 2.5275375212945034E-4 0.0 0.0 0.25363839026190343 0.0 29 2.5275375212945034E-4 0.0 0.0 0.35941583552807843 0.0 30 2.5275375212945034E-4 0.0 0.0 0.575773047350888 0.0 31 2.5275375212945034E-4 0.0 0.0 0.8944955287861248 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2500 0.0 32.412 1 GCATCGG 40 5.937827E-5 27.75 20 AAGACCG 35 8.8669435E-4 26.42857 5 ATTGGAC 215 0.0 24.093025 3 TTGGACC 415 0.0 21.843374 4 GACCCTC 400 0.0 21.275002 7 GTATTGG 245 0.0 21.142857 1 GGACCCT 420 0.0 21.142857 6 TGGACCC 425 0.0 20.894117 5 ACGTTTA 55 5.1411474E-4 20.181818 26 TCACGTT 65 6.898657E-5 19.923077 24 AGCGGGC 75 9.259789E-6 19.733334 26 CTAATAC 105 2.2568202E-8 19.38095 3 GTATCAA 4315 0.0 18.778679 2 AGCGTCG 50 0.0070329914 18.5 33 GTATTAG 90 2.1504911E-6 18.5 1 GTACACT 80 1.6156335E-5 18.5 4 CCGTCAG 60 9.2333485E-4 18.5 14 TCCACGG 100 2.8721115E-7 18.5 2 GCGTCGT 50 0.0070329914 18.5 34 >>END_MODULE