##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088194_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3274074 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.547433564421574 31.0 31.0 33.0 28.0 34.0 2 30.95571236325141 31.0 31.0 34.0 28.0 34.0 3 31.165565897410993 31.0 31.0 34.0 28.0 34.0 4 35.197417651525285 35.0 35.0 37.0 33.0 37.0 5 35.02836466127522 35.0 35.0 37.0 32.0 37.0 6 35.06376489963269 37.0 35.0 37.0 32.0 37.0 7 34.897549963745476 36.0 35.0 37.0 32.0 37.0 8 34.99745240944463 37.0 35.0 37.0 32.0 37.0 9 36.52972657307074 38.0 35.0 39.0 32.0 39.0 10 36.36601310782835 38.0 35.0 39.0 32.0 39.0 11 36.39620393430326 38.0 35.0 39.0 32.0 39.0 12 36.23005344411886 38.0 35.0 39.0 32.0 39.0 13 36.31268688490242 38.0 35.0 39.0 32.0 39.0 14 37.256609349697044 39.0 36.0 41.0 32.0 41.0 15 37.33247110480704 39.0 36.0 41.0 32.0 41.0 16 37.299921138007264 39.0 36.0 41.0 32.0 41.0 17 37.35230602607027 39.0 36.0 41.0 32.0 41.0 18 37.34398153493171 39.0 36.0 41.0 32.0 41.0 19 37.43342056410454 39.0 36.0 41.0 32.0 41.0 20 37.39188454506526 39.0 36.0 41.0 32.0 41.0 21 37.29761972392805 39.0 36.0 41.0 31.0 41.0 22 37.231766905696084 39.0 36.0 40.0 31.0 41.0 23 37.134522005305925 39.0 36.0 40.0 31.0 41.0 24 37.06431589512027 39.0 36.0 40.0 31.0 41.0 25 36.97431029353643 39.0 36.0 40.0 31.0 41.0 26 36.7125150500569 39.0 35.0 40.0 30.0 41.0 27 36.57280715096849 38.0 35.0 40.0 30.0 41.0 28 36.438750620786216 38.0 35.0 40.0 30.0 41.0 29 36.32239283534825 38.0 35.0 40.0 30.0 41.0 30 36.16479529784605 38.0 35.0 40.0 30.0 41.0 31 35.95536325690867 38.0 35.0 40.0 29.0 41.0 32 35.64069382671253 38.0 34.0 40.0 28.0 41.0 33 35.8313297133785 38.0 34.0 40.0 29.0 41.0 34 35.837799939769226 38.0 34.0 40.0 29.0 41.0 35 35.771973693936054 38.0 34.0 40.0 29.0 41.0 36 35.6785185673873 38.0 34.0 40.0 28.0 41.0 37 35.569235454055104 38.0 34.0 40.0 27.0 41.0 38 35.446922702419066 38.0 34.0 40.0 27.0 41.0 39 35.430285937336784 38.0 34.0 40.0 26.0 41.0 40 35.301490131255434 38.0 34.0 40.0 26.0 41.0 41 35.19297517404921 38.0 34.0 40.0 25.0 41.0 42 35.03048159571225 38.0 34.0 40.0 24.0 41.0 43 34.687305784780676 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 4.0 15 9.0 16 45.0 17 103.0 18 252.0 19 544.0 20 1152.0 21 2250.0 22 4099.0 23 7149.0 24 11796.0 25 18847.0 26 28477.0 27 41578.0 28 58161.0 29 78541.0 30 101815.0 31 127594.0 32 156177.0 33 190874.0 34 233708.0 35 283105.0 36 350141.0 37 446832.0 38 561629.0 39 569191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.19438778720335 23.472071798010674 13.404858900562418 22.928681514223566 2 17.511760577189154 23.250390797520154 36.03623497819537 23.201613647095332 3 19.6567640193838 25.959889727599318 31.822432846661375 22.560913406355507 4 13.16017903077328 16.245020729525354 36.18940805858389 34.40539218111747 5 11.731164292560278 39.950440949105 35.00815803185878 13.310236726475944 6 31.483527861618278 36.98490015802942 15.830002620588294 15.701569359764012 7 25.15828903073052 34.41168403646344 22.164526519559423 18.265500413246617 8 27.00186373307384 34.33645665919585 20.4397029511245 18.221976656605808 9 25.399089941155882 13.868012757194858 23.071653236915232 37.66124406473403 10 15.967629320534598 27.798577552004016 34.37106186359868 21.8627312638627 11 32.41194304099418 22.25108534504718 24.552071822445065 20.78489979151357 12 20.038673530286733 27.230111475794377 31.99084687762097 20.740368116297923 13 30.202738239880954 21.023990294660415 28.323122812740337 20.450148652718294 14 20.870786671284765 22.32771769972212 28.56566467343133 28.235830955561784 15 23.055709797640493 29.19649952933257 26.191222312018603 21.556568361008335 16 22.08783307891025 28.201378466094535 27.005834321398964 22.704954133596246 17 19.963323981070676 27.55383659624065 28.183083216811838 24.29975620587684 18 20.768864723277485 26.638554901324774 31.467553879356423 21.125026496041325 19 20.46942127758872 25.61970193709733 32.57040005815385 21.34047672716011 20 23.634713204405276 24.690950784863137 31.502983744411395 20.171352266320184 21 23.293120436495936 25.493742658229472 30.44671562096642 20.766421284308173 22 22.00356497745622 25.273985865927283 31.19266699530921 21.52978216130729 23 21.188036678462367 26.532479107069662 31.79213420344195 20.487350011026017 24 20.17578099945206 26.18144855614137 30.828808389792044 22.813962054614525 25 21.253795729723883 26.614731371374013 31.5948570496574 20.5366158492447 26 22.010834208389916 26.057321856500494 30.58544186844891 21.34640206666068 27 21.28177310592247 26.95213975004841 30.26507647658544 21.50101066744368 28 20.837922417147567 26.62847571557637 30.607402276185574 21.92619959109049 29 20.14526855532282 26.67117481156504 31.30271337788944 21.880843255222697 30 19.83779230402245 26.918145405387904 32.401466796413274 20.84259549417637 31 20.938378301773263 26.460519829423525 31.47225749937234 21.12884436943087 32 21.505103427717273 26.610669154087535 30.231570819718794 21.652656598476394 33 22.194122674075174 26.463787929044972 29.879898866061062 21.462190530818788 34 20.991767443252655 28.14792823864091 30.009798190266928 20.850506127839505 35 20.253299100753374 28.692204269054393 30.24653688340581 20.80795974678642 36 20.742109066563554 26.467819603344335 31.47421225054779 21.31585907954432 37 20.809181466271074 26.516444038833576 31.00400296389147 21.67037153100388 38 21.0432018335566 26.26663294720889 31.326903423685597 21.36326179554891 39 21.525353428175418 25.835579770035743 31.324673785626107 21.31439301616274 40 20.438603403588314 26.27918611491371 30.927187351293835 22.355023130204145 41 20.888501603812255 26.020487014038167 30.843469023607895 22.247542358541683 42 19.365689352164917 27.14795084045138 31.01417377860122 22.472186028782488 43 19.800682574676078 26.74285920232713 30.839803865153936 22.616654357842858 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 271.0 1 396.0 2 521.0 3 1381.0 4 2241.0 5 2241.0 6 3770.5 7 5300.0 8 5789.0 9 6278.0 10 9328.0 11 12378.0 12 12378.0 13 22194.0 14 32010.0 15 51247.5 16 70485.0 17 69556.5 18 68628.0 19 68628.0 20 73882.5 21 79137.0 22 67753.0 23 56369.0 24 61910.5 25 67452.0 26 67452.0 27 76787.0 28 86122.0 29 92356.0 30 98590.0 31 106658.5 32 114727.0 33 114727.0 34 125965.5 35 137204.0 36 147755.5 37 158307.0 38 165803.0 39 173299.0 40 173299.0 41 180779.0 42 188259.0 43 204635.0 44 221011.0 45 257271.0 46 293531.0 47 293531.0 48 295775.0 49 298019.0 50 273565.5 51 249112.0 52 232335.5 53 215559.0 54 215559.0 55 193167.0 56 170775.0 57 148930.5 58 127086.0 59 114076.5 60 101067.0 61 101067.0 62 88904.5 63 76742.0 64 66471.0 65 56200.0 66 47392.5 67 38585.0 68 38585.0 69 32396.5 70 26208.0 71 22298.0 72 18388.0 73 14438.0 74 10488.0 75 10488.0 76 8114.0 77 5740.0 78 4490.0 79 3240.0 80 2679.5 81 2119.0 82 2119.0 83 1579.0 84 1039.0 85 870.5 86 702.0 87 614.5 88 527.0 89 527.0 90 406.5 91 286.0 92 168.5 93 51.0 94 36.0 95 21.0 96 21.0 97 10.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3274074.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.42475249819648 #Duplication Level Percentage of deduplicated Percentage of total 1 72.09701999575084 31.307952491730028 2 14.244431028506815 12.371217837810777 3 5.577160362620438 7.265604251686327 4 2.7133664879873263 4.713090727110011 5 1.4510439036906975 3.1505611190892693 6 0.8697777405029284 2.2661929865868142 7 0.5876241891284647 1.7862204482399884 8 0.40158778571314874 1.39510801607138 9 0.29306783461482444 1.145375836499802 >10 1.5192575607948966 12.315192806068808 >50 0.1444117445073286 4.381214016958741 >100 0.09061031882613253 7.52122530081957 >500 0.00539146399389769 1.5997377429701258 >1k 0.004327359258051488 3.6058637065888357 >5k 5.675225256460968E-4 1.632823018009386 >10k+ 3.5470157852881054E-4 3.5426196937601193 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31881 0.9737409722565831 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31459 0.9608518316934803 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26501 0.8094197015705814 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13850 0.42302037156154687 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11308 0.3453800983117669 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8044 0.24568778836397712 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7433 0.2270260232358829 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7190 0.21960407736660806 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6816 0.20818100018509053 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6300 0.1924208188330502 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5882 0.1796538502184129 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5685 0.17363688175649053 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5654 0.17269004915588346 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4580 0.13988688099291585 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4496 0.13732127007514186 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4046 0.12357692587278114 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3894 0.11893439183109483 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3747 0.11444457272499033 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.054298711635717E-5 0.0 2 0.0 0.0 0.0 9.162896134907153E-5 0.0 3 0.0 0.0 0.0 1.221719484654287E-4 0.0 4 0.0 0.0 0.0 2.1380090981450023E-4 0.0 5 0.0 0.0 0.0 2.1380090981450023E-4 0.0 6 0.0 0.0 0.0 2.1380090981450023E-4 0.0 7 0.0 0.0 0.0 2.443438969308574E-4 0.0 8 3.054298711635717E-5 0.0 0.0 2.7488688404721457E-4 0.0 9 3.054298711635717E-5 0.0 0.0 5.803167552107864E-4 0.0 10 3.054298711635717E-5 0.0 0.0 8.857466263743581E-4 0.0 11 3.054298711635717E-5 0.0 0.0 0.0013438914331197157 0.0 12 3.054298711635717E-5 0.0 0.0 0.0016798642913996445 0.0 13 3.054298711635717E-5 0.0 0.0 0.0017714932527487161 0.0 14 3.054298711635717E-5 0.0 0.0 0.001954751175446859 0.0 15 3.054298711635717E-5 0.0 0.0 0.0025350679306576454 0.0 16 3.054298711635717E-5 0.0 0.0 0.003329185595682932 0.0 17 3.054298711635717E-5 0.0 0.0 0.004459276118988147 0.0 18 3.054298711635717E-5 0.0 0.0 0.005039592874198934 0.0 19 3.054298711635717E-5 0.0 0.0 0.005833710539224221 0.0 20 3.054298711635717E-5 0.0 0.0 0.0068416291140640075 0.0 21 3.054298711635717E-5 0.0 0.0 0.008735294315278152 0.0 22 3.054298711635717E-5 0.0 0.0 0.013774887189477086 0.0 23 3.054298711635717E-5 0.0 0.0 0.02278506838880245 0.0 24 3.054298711635717E-5 0.0 0.0 0.03509389219669439 0.0 25 3.054298711635717E-5 0.0 0.0 0.039644797277031615 0.0 26 3.054298711635717E-5 0.0 0.0 0.04841063457942612 0.0 27 3.054298711635717E-5 0.0 0.0 0.11099321518084197 0.0 28 3.054298711635717E-5 0.0 0.0 0.17449208539574854 0.0 29 3.054298711635717E-5 0.0 0.0 0.2537511369626954 0.0 30 3.054298711635717E-5 0.0 0.0 0.39330204509733135 0.0 31 3.054298711635717E-5 0.0 0.0 0.613547525193383 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7580 0.0 28.726254 1 ATTGGAC 900 0.0 22.405556 3 GTATTGG 935 0.0 22.35829 1 TATACTG 390 0.0 18.025642 5 TTGGACC 1550 0.0 17.78387 4 GTCGTAC 65 0.0015807772 17.076923 1 GTATCAA 13250 0.0 16.866415 2 GGACCCT 1525 0.0 16.619673 6 AGTGCGC 135 2.2235326E-8 16.444443 8 TATTGGA 1320 0.0 16.397728 2 TGGACCC 1535 0.0 16.270357 5 TAAACGT 195 1.8189894E-12 16.128206 4 GACCCTC 1605 0.0 15.330218 7 CTTGCGA 85 5.367912E-4 15.235294 10 TAGTGCG 110 1.4534202E-5 15.136364 7 CGTCTGT 760 0.0 15.092106 34 ACGTTTA 255 0.0 14.509804 26 ACGTCGC 170 2.4412657E-8 14.147059 37 GACGTCG 185 4.9076334E-9 14.0 36 TCCAACG 80 0.006301901 13.875001 2 >>END_MODULE