##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088193_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2402938 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.525658589609886 31.0 31.0 33.0 28.0 34.0 2 30.912172515478968 31.0 31.0 34.0 27.0 34.0 3 31.09574945337749 31.0 31.0 34.0 28.0 34.0 4 35.140160503516945 35.0 35.0 37.0 32.0 37.0 5 35.00203584112449 35.0 35.0 37.0 32.0 37.0 6 35.04518926414248 36.0 35.0 37.0 32.0 37.0 7 34.85304864295292 36.0 35.0 37.0 32.0 37.0 8 34.96714313894075 36.0 35.0 37.0 32.0 37.0 9 36.42866732308532 38.0 35.0 39.0 32.0 39.0 10 36.309543150926075 38.0 35.0 39.0 32.0 39.0 11 36.34547291690422 38.0 35.0 39.0 32.0 39.0 12 36.181849885431916 38.0 35.0 39.0 31.0 39.0 13 36.253408535717526 38.0 35.0 39.0 32.0 39.0 14 37.10923253117642 39.0 36.0 40.0 31.0 41.0 15 37.18465853051556 39.0 36.0 41.0 32.0 41.0 16 37.147996327828686 39.0 36.0 40.0 31.0 41.0 17 37.27971924369251 39.0 36.0 40.0 32.0 41.0 18 37.30296745067913 39.0 36.0 40.0 32.0 41.0 19 37.418983344555706 39.0 36.0 41.0 32.0 41.0 20 37.384861781702234 39.0 36.0 41.0 32.0 41.0 21 37.282300250776345 39.0 36.0 41.0 31.0 41.0 22 37.22579067791179 39.0 36.0 40.0 31.0 41.0 23 37.09812030106478 39.0 36.0 40.0 31.0 41.0 24 37.032382441827465 39.0 36.0 40.0 31.0 41.0 25 36.93846949026567 39.0 35.0 40.0 31.0 41.0 26 36.65541974033454 38.0 35.0 40.0 30.0 41.0 27 36.50473087528684 38.0 35.0 40.0 30.0 41.0 28 36.34206126000754 38.0 35.0 40.0 30.0 41.0 29 36.203830061366546 38.0 35.0 40.0 30.0 41.0 30 36.01323463193807 38.0 35.0 40.0 30.0 41.0 31 35.70825006720939 38.0 34.0 40.0 29.0 41.0 32 35.38702413462187 38.0 34.0 40.0 27.0 41.0 33 35.48150680541903 38.0 34.0 40.0 28.0 41.0 34 35.43730591467612 38.0 34.0 40.0 27.0 41.0 35 35.32626767731835 38.0 34.0 40.0 27.0 41.0 36 35.20769532963397 38.0 34.0 40.0 26.0 41.0 37 35.05497062346178 38.0 34.0 40.0 25.0 41.0 38 34.89194727454475 38.0 33.0 40.0 25.0 41.0 39 34.78711435750735 38.0 33.0 40.0 24.0 41.0 40 34.57909151214056 38.0 33.0 40.0 23.0 41.0 41 34.408324725814815 38.0 33.0 40.0 22.0 41.0 42 34.15766615701279 38.0 33.0 40.0 21.0 41.0 43 33.794057524580325 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 11.0 16 28.0 17 71.0 18 189.0 19 446.0 20 984.0 21 1870.0 22 3405.0 23 5989.0 24 9867.0 25 15377.0 26 23365.0 27 34303.0 28 47731.0 29 64305.0 30 81571.0 31 99886.0 32 121094.0 33 146698.0 34 176943.0 35 212073.0 36 260918.0 37 334037.0 38 384941.0 39 376833.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.9866330300657 24.161547239254613 14.49155159225914 21.360268138420548 2 17.209016628810232 23.396733498741956 36.85226168964826 22.541988182799557 3 19.813120438396663 26.26905063717832 32.96631040834178 20.95151851608323 4 12.616721696523173 15.611763599393742 35.197703810918135 36.573810893164946 5 10.573472973501605 41.32740836426075 34.56293920192697 13.536179460310668 6 31.11586732574873 35.94474763809969 15.376634769602878 17.562750266548697 7 23.686170845856196 36.278963502179415 21.272042807596367 18.762822844368017 8 28.10322197243541 33.27314312728834 20.281089233263614 18.342545667012633 9 24.947293687976966 13.482869720317378 24.71104123368976 36.8587953580159 10 16.231713011321975 28.2253641167604 33.60989755041537 21.93302532150226 11 30.560547130221423 21.641174262506983 25.964590014390716 21.833688592880883 12 20.20097896824637 27.929143406945993 32.096500201003934 19.77337742380369 13 31.346834583330907 20.984353320809777 29.810506971049605 17.85830512480971 14 20.59270776025016 22.701376398392302 29.657194650881546 27.048721190475995 15 22.51248263583996 29.018185238237525 28.26040455475755 20.208927571164967 16 21.033376641428116 28.545930023995624 28.08965524703509 22.33103808754117 17 18.447001129450697 27.173568356736627 28.756630424921493 25.622800088891186 18 19.744579344119572 26.305797319781032 34.201340192714085 19.748283143385308 19 18.770022364289048 24.562181795784994 35.865802613300886 20.801993226625072 20 24.066829855784878 23.2681409174935 34.25943574074737 18.405593485974254 21 23.26963908348863 24.346862049707482 32.788028654921604 19.595470211882287 22 21.081026643217594 23.890753735635293 33.8013714877371 21.226848133410016 23 19.9604817103063 26.354321251734337 35.06923607683594 18.615960961123424 24 18.3153706004899 25.363950297510797 33.35125583764542 22.969423264353885 25 19.85448646615102 26.43247557781349 34.684207416088135 19.028830539947347 26 21.528270808485278 25.20847395979422 32.881996955393774 20.38125827632673 27 19.771338253421437 26.998324551028784 32.489893621891206 20.740443573658577 28 19.487602260233096 26.324149853221346 32.606292796568205 21.581955089977352 29 18.42706719857108 26.309917276267637 33.70690379859988 21.5561117265614 30 17.68701481270012 26.367014046970834 36.240302496360705 19.70566864396834 31 19.508160426944016 25.840658394015993 34.63193806914702 20.019243109892972 32 20.94506807915976 25.99963045238787 32.215812476227015 20.83948899222535 33 22.044139299474228 26.012240016180193 31.448293713778714 20.495326970566865 34 19.672167987688404 29.42805848507119 31.686751801336534 19.21302172590387 35 18.108207535941418 30.455592279118314 31.792705429769725 19.643494755170547 36 19.35131077039857 26.13521447494692 34.34233425914443 20.17114049551008 37 19.393384265428402 26.667479560438096 33.22337072367244 20.71576545046106 38 20.010961581197684 26.079366175906326 33.8013714877371 20.108300755158893 39 21.059885856397457 25.52745846959014 33.4860907772069 19.926564896805495 40 19.038568618915676 26.467307937200214 32.41086536564822 22.083258078235893 41 20.249835825976366 25.91215420456125 32.15047579255062 21.687534176911765 42 17.325873576430187 27.9329304376559 32.813289398228335 21.927906587685577 43 18.168508717245306 27.81045536755422 32.12750391395866 21.893532001241812 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 176.0 1 293.0 2 410.0 3 1147.0 4 1884.0 5 1884.0 6 3266.0 7 4648.0 8 5374.5 9 6101.0 10 9358.0 11 12615.0 12 12615.0 13 22939.5 14 33264.0 15 56017.0 16 78770.0 17 76468.5 18 74167.0 19 74167.0 20 77201.0 21 80235.0 22 63883.5 23 47532.0 24 50996.0 25 54460.0 26 54460.0 27 57385.0 28 60310.0 29 62220.5 30 64131.0 31 68415.0 32 72699.0 33 72699.0 34 78588.5 35 84478.0 36 91660.5 37 98843.0 38 102038.0 39 105233.0 40 105233.0 41 111898.5 42 118564.0 43 138037.5 44 157511.0 45 208035.5 46 258560.0 47 258560.0 48 261899.0 49 265238.0 50 236252.0 51 207266.0 52 189731.0 53 172196.0 54 172196.0 55 145566.0 56 118936.0 57 93433.5 58 67931.0 59 57761.5 60 47592.0 61 47592.0 62 41721.5 63 35851.0 64 30530.0 65 25209.0 66 21246.0 67 17283.0 68 17283.0 69 14619.5 70 11956.0 71 9906.0 72 7856.0 73 6317.0 74 4778.0 75 4778.0 76 3827.0 77 2876.0 78 2188.5 79 1501.0 80 1197.0 81 893.0 82 893.0 83 676.0 84 459.0 85 364.0 86 269.0 87 206.0 88 143.0 89 143.0 90 115.0 91 87.0 92 51.5 93 16.0 94 11.5 95 7.0 96 7.0 97 5.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2402938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.382947286341704 #Duplication Level Percentage of deduplicated Percentage of total 1 72.38795791079376 27.784631726559184 2 14.036226439899336 10.775034790836235 3 5.43225055734919 6.255173603668028 4 2.664595840338085 4.091001667164083 5 1.4309573766769894 2.7462180778997345 6 0.8782987955859214 2.022701782357909 7 0.5594639786392458 1.5031713480502022 8 0.39478036440231307 1.2122267133229399 9 0.2961556004233567 1.0230592319644118 >10 1.6437370375018097 11.94606493968749 >50 0.15809224104734731 4.220462876949849 >100 0.09690232569292692 7.087849681634573 >500 0.009852860896180066 2.5461722707844965 >1k 0.00886757480656206 6.934510306350859 >5k 0.001094762321797785 3.1801310959045694 >10k+ 7.663336252584495E-4 6.671589886865455 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37472 1.5594243380395165 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36954 1.5378673939985135 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32802 1.3650789158937935 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18317 0.7622751814653561 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12615 0.5249823341259741 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 10564 0.43962848812578603 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10047 0.41811315980686975 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9910 0.4124118058809674 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9788 0.4073346877863682 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8567 0.35652189111828936 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8263 0.3438707116038782 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7935 0.33022075475938206 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7310 0.3042109284550829 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6702 0.2789085694262607 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6086 0.25327328462074344 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5855 0.24366005281867448 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5265 0.21910677678741605 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4881 0.20312633950605466 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4564 0.18993415560451415 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4501 0.18731236511304078 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4162 0.17320463532558894 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3663 0.15243839000423648 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3539 0.14727804046546353 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3446 0.1434077783113838 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3440 0.14315808397886254 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3281 0.13654118416704886 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3001 0.12488878198272282 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2866 0.11927065950099419 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2755 0.11465131434935066 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2747 0.11431838857265564 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2720 0.11319476407630992 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2686 0.11177982952535605 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2634 0.10961581197683834 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2607 0.10849218748049264 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2604 0.108367340314232 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2491 0.10366476371841471 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2482 0.1032902222196328 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2420 0.10071004745024632 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 2.4969433252127187E-4 0.0 0.0 0.0 0.0 7 2.4969433252127187E-4 0.0 0.0 4.161572208687865E-5 0.0 8 2.9131005460815055E-4 0.0 0.0 8.32314441737573E-5 0.0 9 2.9131005460815055E-4 0.0 0.0 1.2484716626063593E-4 0.0 10 2.9131005460815055E-4 0.0 0.0 1.664628883475146E-4 0.0 11 3.329257766950292E-4 0.0 0.0 4.577729429556651E-4 0.0 12 3.329257766950292E-4 0.0 0.0 8.32314441737573E-4 0.0 13 3.329257766950292E-4 0.0 0.0 0.001040393052171966 0.0 14 4.577729429556651E-4 0.0 0.0 0.0012484716626063594 0.0 15 4.577729429556651E-4 0.0 0.0 0.0022472489926914467 0.0 16 4.577729429556651E-4 0.0 0.0 0.003329257766950292 0.0 17 4.577729429556651E-4 0.0 0.0 0.0052435809829467096 0.0 18 4.577729429556651E-4 0.0 0.0 0.005784585370076132 0.0 19 4.577729429556651E-4 0.0 0.0 0.006783362700161219 0.0 20 4.993886650425437E-4 0.0 0.0 0.008447991583636365 0.0 21 4.993886650425437E-4 0.0 0.0 0.011694017906412899 0.0 22 4.993886650425437E-4 0.0 4.161572208687865E-5 0.019309695048311693 0.0 23 4.993886650425437E-4 0.0 4.161572208687865E-5 0.030296245679247654 0.0 24 4.993886650425437E-4 0.0 4.161572208687865E-5 0.0473586917348679 0.0 25 4.993886650425437E-4 0.0 4.161572208687865E-5 0.05489113743259293 0.0 26 4.993886650425437E-4 0.0 4.161572208687865E-5 0.06479567928927005 0.0 27 5.410043871294224E-4 0.0 4.161572208687865E-5 0.1338361622314017 0.0 28 5.826201092163011E-4 0.0 4.161572208687865E-5 0.2050406627220511 0.0 29 5.826201092163011E-4 0.0 4.161572208687865E-5 0.2943063865984058 0.0 30 5.826201092163011E-4 0.0 4.161572208687865E-5 0.4769161751156293 0.0 31 7.906987196506942E-4 0.0 4.161572208687865E-5 0.7312298527885447 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8105 0.0 29.924118 1 CTGTGCG 100 2.0008883E-11 24.050001 9 GTATTGG 720 0.0 22.61111 1 ATTGGAC 750 0.0 22.446669 3 AGCCGTC 180 0.0 18.5 12 TTGGACC 1325 0.0 17.732075 4 TATTGGA 905 0.0 17.58011 2 GGACCCT 1340 0.0 17.395523 6 GTATCAA 14295 0.0 17.28996 2 TCACGTT 150 2.5102054E-10 17.266666 24 ACGTTTA 140 1.87174E-9 17.178572 26 ACGATCT 340 0.0 16.867645 32 CGATCTG 340 0.0 16.867645 33 CAATGCG 110 7.816325E-7 16.818182 19 CGGTGTG 155 4.0199666E-10 16.709677 30 CGGGATA 145 2.9849616E-9 16.586206 24 TTTTTAC 2040 0.0 16.232843 1 ATCACGT 160 6.311893E-10 16.1875 23 CGACGAG 115 1.2434975E-6 16.086956 24 GTACTAG 230 0.0 16.086956 1 >>END_MODULE