##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088192_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1545187 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.352976694730152 31.0 30.0 31.0 27.0 34.0 2 30.706829658805052 31.0 31.0 34.0 27.0 34.0 3 30.870027381799098 31.0 31.0 34.0 27.0 34.0 4 34.89652708701277 35.0 35.0 37.0 32.0 37.0 5 34.70989012980306 35.0 35.0 37.0 32.0 37.0 6 34.776671690869776 35.0 35.0 37.0 32.0 37.0 7 34.603980618527075 35.0 35.0 37.0 30.0 37.0 8 34.714143983867324 35.0 35.0 37.0 31.0 37.0 9 36.16884817177468 38.0 35.0 39.0 32.0 39.0 10 35.96650631929987 37.0 35.0 39.0 30.0 39.0 11 36.0291725208664 37.0 35.0 39.0 30.0 39.0 12 35.840550043457526 37.0 35.0 39.0 30.0 39.0 13 35.933028170700375 37.0 35.0 39.0 30.0 39.0 14 36.77075201901129 38.0 36.0 40.0 31.0 41.0 15 36.85004921734392 38.0 36.0 40.0 31.0 41.0 16 36.79690548781474 38.0 36.0 40.0 31.0 41.0 17 36.87658710563834 38.0 36.0 40.0 31.0 41.0 18 36.88338628269588 38.0 36.0 40.0 31.0 41.0 19 36.97620093878605 39.0 36.0 40.0 31.0 41.0 20 36.94998469440915 39.0 36.0 40.0 31.0 41.0 21 36.855905466458104 39.0 36.0 40.0 31.0 41.0 22 36.78495159485551 39.0 35.0 40.0 30.0 41.0 23 36.66030454566341 38.0 35.0 40.0 30.0 41.0 24 36.5851382389316 38.0 35.0 40.0 30.0 41.0 25 36.48814997796383 38.0 35.0 40.0 30.0 41.0 26 36.20416622712979 38.0 35.0 40.0 30.0 41.0 27 36.040487009015735 38.0 34.0 40.0 29.0 41.0 28 35.88118201874595 38.0 34.0 40.0 29.0 41.0 29 35.73776572026557 38.0 34.0 40.0 28.0 41.0 30 35.56997632001823 38.0 34.0 40.0 27.0 41.0 31 35.31465770809617 38.0 34.0 40.0 27.0 41.0 32 35.02514905962838 37.0 33.0 40.0 26.0 41.0 33 35.20548192548863 38.0 33.0 40.0 27.0 41.0 34 35.18991487761676 38.0 33.0 40.0 27.0 41.0 35 35.10108614685472 38.0 33.0 40.0 26.0 41.0 36 34.995629008010035 38.0 33.0 40.0 25.0 41.0 37 34.87855579939515 38.0 33.0 40.0 25.0 41.0 38 34.74245447314791 38.0 33.0 40.0 25.0 41.0 39 34.70269100115391 38.0 33.0 40.0 24.0 41.0 40 34.54900992565948 38.0 33.0 40.0 24.0 41.0 41 34.412787578461376 38.0 33.0 40.0 23.0 41.0 42 34.21859037126251 38.0 33.0 40.0 22.0 41.0 43 33.864298625344375 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 7.0 16 23.0 17 79.0 18 208.0 19 378.0 20 770.0 21 1599.0 22 2834.0 23 4703.0 24 7801.0 25 11909.0 26 17506.0 27 24815.0 28 34152.0 29 45261.0 30 56930.0 31 69754.0 32 83915.0 33 99973.0 34 119040.0 35 141114.0 36 172045.0 37 213087.0 38 256999.0 39 180283.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.02252607613189 24.794021694461577 14.403952401877573 21.779499827528966 2 18.451358961730847 24.297965230098363 35.09588159879678 22.15479420937401 3 20.815215245792256 26.207378136109092 32.00661149750807 20.970795120590584 4 14.029758210494911 16.851229009822113 35.47162900024398 33.647383779439 5 11.487088617753063 40.72465015561224 34.68110979447795 13.107151432156755 6 31.692668913212447 37.06819951242147 15.12528904268545 16.113842531680632 7 24.272337264033414 35.23366427493889 22.03293193639346 18.461066524634234 8 26.980164860304935 34.55089901740048 20.45156993943128 18.017366182863302 9 24.96125064474397 13.791016880157548 23.63183226366776 37.61590021143072 10 16.129568783584123 28.126563322109234 34.31759392228902 21.426273972017626 11 31.985125424948567 22.099396383738668 24.755903330794265 21.1595748605185 12 19.59212703705118 27.608244180154244 32.13779303087587 20.6618357519187 13 30.47042202658966 21.05343883944144 28.983999994822636 19.492139139146264 14 20.56042407812129 22.64101367666179 28.83521541405668 27.96334683116024 15 22.839436262407077 29.519533881659633 26.66318057296625 20.977849282967046 16 21.49830408876078 28.51357149652437 27.495507016302884 22.49261739841197 17 19.390727465348853 27.56902562602455 28.681512334753013 24.358734573873583 18 20.39151248360231 26.374995388907617 32.500920600548675 20.7325715269414 19 19.73049216696749 25.375439995288595 33.7556554643548 21.138412373389112 20 23.376070339706455 24.46804173216575 32.60285001103426 19.55303791709353 21 23.22644443682221 25.020466778454647 31.389404648110553 20.36368413661259 22 21.668251156656122 24.86158633226917 32.0413645727022 21.428797938372508 23 20.76939554888826 26.6610449091275 32.85634683698478 19.71321270499946 24 19.760391460709933 25.85913549622149 31.69273363029847 22.687739412770107 25 20.67775615508026 26.540282826609335 32.61339889605595 20.168562122254457 26 21.770504152571824 25.901848772996406 31.45988155478916 20.867765519642607 27 20.837995660072213 26.973499000444605 31.095071340879777 21.093433998603405 28 20.572849758637627 26.538535465286728 31.488357072639104 21.400257703436544 29 19.822260994947538 26.37823124320875 32.07165216896078 21.727855592882932 30 19.26931821197046 26.636193548094827 33.520926593350836 20.573561646583876 31 20.424324046215766 26.08493340935434 32.75357610438089 20.737166440049005 32 21.23484083156278 26.38664446439169 30.96240131453345 21.416113389512077 33 22.000249807952045 26.343219299670523 30.696737676410685 20.95979321596674 34 20.76596554332906 28.441994399383375 30.71524676301315 20.076793294274413 35 19.71295383665537 29.066125976985308 30.88059891780089 20.340321268558434 36 20.435520102097676 26.229834964958933 32.5336674460761 20.800977486867286 37 20.44263898156016 26.527662994834927 31.838670659279426 21.191027364325482 38 20.790558036017647 26.009602721224034 32.360225655535544 20.83961358722278 39 21.501798811405997 25.76018307169294 32.12057828599386 20.6174398309072 40 20.178204968071825 26.36399348428378 31.448103045133045 22.009698502511345 41 20.697883168833286 26.078979437440257 31.36908348309946 21.854053910626998 42 18.945473913513382 27.443280327882647 31.48473291582184 22.126512842782137 43 19.390662748262834 27.21353467250242 31.139790847321393 22.256011731913354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 118.0 1 174.0 2 230.0 3 532.0 4 834.0 5 834.0 6 1668.5 7 2503.0 8 2820.5 9 3138.0 10 4695.0 11 6252.0 12 6252.0 13 11799.5 14 17347.0 15 28514.5 16 39682.0 17 38369.5 18 37057.0 19 37057.0 20 40261.5 21 43466.0 22 36303.5 23 29141.0 24 32044.5 25 34948.0 26 34948.0 27 38315.0 28 41682.0 29 44129.5 30 46577.0 31 50017.0 32 53457.0 33 53457.0 34 57639.0 35 61821.0 36 67367.5 37 72914.0 38 75688.0 39 78462.0 40 78462.0 41 81978.5 42 85495.0 43 94100.5 44 102706.0 45 122747.0 46 142788.0 47 142788.0 48 144904.0 49 147020.0 50 133979.0 51 120938.0 52 112942.5 53 104947.0 54 104947.0 55 90816.0 56 76685.0 57 65213.5 58 53742.0 59 47264.0 60 40786.0 61 40786.0 62 35922.5 63 31059.0 64 27182.5 65 23306.0 66 19705.0 67 16104.0 68 16104.0 69 13625.5 70 11147.0 71 9498.5 72 7850.0 73 6273.0 74 4696.0 75 4696.0 76 3657.0 77 2618.0 78 2049.0 79 1480.0 80 1202.0 81 924.0 82 924.0 83 726.0 84 528.0 85 427.0 86 326.0 87 282.0 88 238.0 89 238.0 90 192.0 91 146.0 92 82.5 93 19.0 94 13.5 95 8.0 96 8.0 97 4.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1545187.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.503833467718174 #Duplication Level Percentage of deduplicated Percentage of total 1 78.87066231193951 40.62141457202769 2 12.248893094753173 12.617299002321012 3 3.8295133957673992 5.917038605940002 4 1.683424950968087 3.4681135332024797 5 0.8452659652028047 2.176721875386766 6 0.5156896943544511 1.593599768343008 7 0.32395399463912017 1.1679410813766717 8 0.23639871209002772 0.9740351919574274 9 0.17563939591546376 0.8141491977840599 >10 1.1059266084079 10.837589126365527 >50 0.10038121467127586 3.584672679720059 >100 0.05347893808685019 5.00745275588327 >500 0.006209581611708391 2.403394053696756 >1k 0.003928510815570615 4.560659356979628 >5k 2.5345231068197514E-4 0.911479183115857 >10k+ 3.8017846602296274E-4 3.3444400158997225 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18515 1.1982368477084002 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18305 1.1846462596436549 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14421 0.9332850975318845 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7460 0.4827894617285804 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6505 0.42098464457699947 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4801 0.3107067299944926 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4665 0.3019052062954193 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4610 0.2983457665641764 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4453 0.2881851840586285 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3730 0.2413947308642902 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3552 0.22987508955226776 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3278 0.21214260798207593 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3247 0.21013637831537543 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2595 0.1679408382286416 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2514 0.16269875426081115 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2317 0.14994948831435936 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2317 0.14994948831435936 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2262 0.14639004858311647 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2015 0.1304049283355348 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1851 0.11979132622782873 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1766 0.11429037391590792 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1723 0.1115075392169362 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1654 0.10704206028137694 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1614 0.10445337684047303 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1606 0.10393564015229226 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.471708602259791E-5 0.0 8 0.0 0.0 0.0 6.471708602259791E-5 0.0 9 0.0 0.0 0.0 1.2943417204519582E-4 0.0 10 0.0 0.0 0.0 3.2358543011298954E-4 0.0 11 0.0 0.0 0.0 4.530196021581854E-4 0.0 12 0.0 0.0 0.0 0.0011649075484067625 0.0 13 0.0 0.0 0.0 0.0012943417204519581 0.0 14 0.0 0.0 0.0 0.0016179271505649478 0.0 15 0.0 0.0 0.0 0.0023945321828361225 0.0 16 0.0 0.0 0.0 0.004012459333401071 0.0 17 0.0 0.0 0.0 0.00556566939794342 0.0 18 0.0 0.0 0.0 0.006018689000101606 0.0 19 0.0 0.0 0.0 0.0071835965485083685 0.0 20 0.0 0.0 0.0 0.008736806613050718 0.0 21 0.0 0.0 0.0 0.012037378000203212 0.0 22 0.0 0.0 0.0 0.018962106204621187 6.471708602259791E-5 23 0.0 0.0 0.0 0.02976985957039504 6.471708602259791E-5 24 0.0 0.0 0.0 0.046725736108315694 6.471708602259791E-5 25 0.0 0.0 0.0 0.052873859280462496 6.471708602259791E-5 26 0.0 0.0 0.0 0.06012217291499346 6.471708602259791E-5 27 0.0 0.0 0.0 0.1148728276901113 6.471708602259791E-5 28 0.0 0.0 0.0 0.17137084378783926 6.471708602259791E-5 29 0.0 0.0 0.0 0.23906491576747668 6.471708602259791E-5 30 0.0 0.0 0.0 0.3717349421138024 6.471708602259791E-5 31 0.0 0.0 0.0 0.5736522505043079 6.471708602259791E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4255 0.0 29.73913 1 ACCGTCC 45 0.0038263958 20.555555 8 TCCGACG 85 1.2458768E-6 19.588236 23 GTATCAA 6860 0.0 18.742712 2 CGACGAG 80 1.6172573E-5 18.5 24 ATTGGAC 445 0.0 17.876406 3 TATACCG 110 7.811868E-7 16.818182 5 GTATTGG 500 0.0 16.65 1 TGGACCC 770 0.0 16.337662 5 TGCGACG 80 3.3835077E-4 16.1875 22 GAACCGA 70 0.002593035 15.857143 6 CAATGCG 95 7.062189E-5 15.578948 19 CGATCTG 180 2.0190782E-10 15.416666 33 TATACTG 205 5.456968E-12 15.341464 5 AGACGAG 85 5.365635E-4 15.235294 5 TTGGACC 820 0.0 15.115854 4 CGAGTTG 75 0.004105257 14.8 32 GGACTGA 150 8.1059625E-8 14.8 6 TTATGCG 75 0.004105257 14.8 4 CGACCCG 100 1.0937512E-4 14.799999 5 >>END_MODULE