##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088191_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2732554 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.622492730244307 31.0 31.0 33.0 28.0 34.0 2 30.982611505573175 31.0 31.0 34.0 28.0 34.0 3 31.153011431796042 31.0 31.0 34.0 28.0 34.0 4 35.1810899253958 35.0 35.0 37.0 33.0 37.0 5 35.03591219057336 35.0 35.0 37.0 32.0 37.0 6 35.083850858940025 37.0 35.0 37.0 32.0 37.0 7 34.90744483000153 36.0 35.0 37.0 32.0 37.0 8 35.01493913752482 37.0 35.0 37.0 32.0 37.0 9 36.48902052804812 38.0 35.0 39.0 32.0 39.0 10 36.367454769420846 38.0 35.0 39.0 32.0 39.0 11 36.40147422521202 38.0 35.0 39.0 32.0 39.0 12 36.24727306395409 38.0 35.0 39.0 32.0 39.0 13 36.31880907019587 38.0 35.0 39.0 32.0 39.0 14 37.216406702301214 39.0 36.0 41.0 31.0 41.0 15 37.27909457599008 39.0 36.0 41.0 32.0 41.0 16 37.233660158225604 39.0 36.0 41.0 32.0 41.0 17 37.35810527440629 39.0 36.0 41.0 32.0 41.0 18 37.37691697949977 39.0 36.0 41.0 32.0 41.0 19 37.48012116137504 39.0 36.0 41.0 32.0 41.0 20 37.45407080701791 39.0 36.0 41.0 32.0 41.0 21 37.36380616814892 39.0 36.0 41.0 32.0 41.0 22 37.303244876405 39.0 36.0 41.0 31.0 41.0 23 37.20483694009341 39.0 36.0 40.0 31.0 41.0 24 37.12259227082063 39.0 36.0 40.0 31.0 41.0 25 37.032306040429575 39.0 36.0 40.0 31.0 41.0 26 36.75932991626149 39.0 35.0 40.0 30.0 41.0 27 36.60337801192584 38.0 35.0 40.0 30.0 41.0 28 36.44487977181787 38.0 35.0 40.0 30.0 41.0 29 36.31135889720752 38.0 35.0 40.0 30.0 41.0 30 36.1275411208708 38.0 35.0 40.0 30.0 41.0 31 35.85506196766834 38.0 34.0 40.0 29.0 41.0 32 35.55936131545799 38.0 34.0 40.0 28.0 41.0 33 35.65262754185279 38.0 34.0 40.0 29.0 41.0 34 35.60828624063788 38.0 34.0 40.0 28.0 41.0 35 35.46841160321077 38.0 34.0 40.0 27.0 41.0 36 35.35283401535706 38.0 34.0 40.0 27.0 41.0 37 35.20379615553801 38.0 34.0 40.0 26.0 41.0 38 35.04668636008657 38.0 34.0 40.0 25.0 41.0 39 34.950439039814036 38.0 34.0 40.0 24.0 41.0 40 34.74326106638698 38.0 33.0 40.0 24.0 41.0 41 34.58669179090331 38.0 33.0 40.0 23.0 41.0 42 34.35986480047604 38.0 33.0 40.0 22.0 41.0 43 34.00430256822006 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 4.0 16 34.0 17 82.0 18 219.0 19 517.0 20 1083.0 21 2038.0 22 3699.0 23 6459.0 24 10848.0 25 16652.0 26 25481.0 27 37239.0 28 52019.0 29 70081.0 30 89314.0 31 109906.0 32 133712.0 33 162669.0 34 196852.0 35 236594.0 36 292364.0 37 376383.0 38 445625.0 39 462677.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.19349663355234 24.013688293076733 14.236168800323801 21.55664627304712 2 17.346262873487586 23.202615575026147 36.88296736313354 22.56815418835273 3 20.043007384300548 26.157360476682257 32.65904351752976 21.140588621487446 4 12.510640228884773 15.508714557882481 35.20966099846517 36.77098421476758 5 10.652561669412572 41.29038255053697 34.505228441963084 13.55182733808737 6 31.300095075888713 35.74044648339978 15.44280552186709 17.51665291884442 7 23.902620039713764 36.20213909770859 21.08478002630506 18.810460836272586 8 28.038970135631352 33.35805989561414 20.202382093821385 18.400587874933123 9 24.989917857067052 13.55102223048474 24.624472197072773 36.834587715375434 10 16.316200887521344 27.9298048638746 33.567570851298825 22.186423397305234 11 30.72451633160772 21.563562879269725 25.842746383054095 21.869174406068463 12 20.214312324660373 27.65442146797465 32.11738907995963 20.01387712740535 13 31.39601266800217 20.8825882306443 29.63531553264821 18.086083568705323 14 20.603581850532503 22.8418907732473 29.36340873775962 27.191118638460576 15 22.792303464085247 28.87357395315884 28.14136518436598 20.192757398389933 16 21.18428400683024 28.639141257592716 27.869531581077627 22.307043154499418 17 18.536760847178137 27.131870038066953 28.574000733379833 25.75736838137508 18 19.69289536455638 26.49587162778851 33.80306482506842 20.008168182586694 19 18.842043011775797 24.735760025236463 35.42016004075308 21.00203692223466 20 24.18371238043237 23.243200317358777 33.9259169260699 18.647170376138952 21 23.408796312899945 24.47040387856928 32.434784454396876 19.686015354133897 22 21.34245105494713 23.931457530208004 33.45899111234398 21.267100302500882 23 20.111807488525386 26.296424517136714 34.655051647652705 18.936716346685188 24 18.48761268761752 25.37761376353404 32.994041471824524 23.140732077023912 25 20.006301796780594 26.458617103266764 34.307537929717036 19.227543170235613 26 21.739625273645096 25.041444743635445 32.616848559991865 20.602081422727604 27 20.063903586168838 26.850301951946786 32.12423249458199 20.961561967302384 28 19.652969346625902 26.253753814197268 32.33952558668557 21.75375125249126 29 18.605158397601656 26.236041446939385 33.39494846213469 21.76385169332427 30 17.882464536839894 26.385791461028766 35.97960003718133 19.752143964950005 31 19.776553363629777 25.78254629185736 34.1851615741171 20.255738770395755 32 21.09517323353903 25.977418927494206 31.89774108764182 21.029666751324953 33 22.12077053189068 25.877841755368785 31.250690745727255 20.750696967013276 34 19.928352742525856 29.18013697076069 31.402819486824413 19.488690799889042 35 18.346755452957197 30.149706099129244 31.554435886719894 19.94910256119367 36 19.50424401493987 25.941445255976642 34.2256731248495 20.328637604233986 37 19.718549020440218 26.311684965786586 32.97186441695205 20.99790159682114 38 20.13241092399272 25.820020391179828 33.59889685620119 20.44867182862626 39 21.2243564079612 25.239501213882694 33.435899162468516 20.100243215687595 40 19.117206832875034 26.278675554078713 32.38076905342035 22.2233485596259 41 20.350631680105867 25.74649942873956 32.09294308547974 21.809925805674837 42 17.43753279898586 27.72388029660164 32.608468121764474 22.230118782648027 43 18.333471177513783 27.45727989273039 32.14509210065016 22.064156829105663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 125.0 1 221.0 2 317.0 3 1123.5 4 1930.0 5 1930.0 6 3461.5 7 4993.0 8 5601.5 9 6210.0 10 9668.0 11 13126.0 12 13126.0 13 24115.0 14 35104.0 15 59091.0 16 83078.0 17 81335.0 18 79592.0 19 79592.0 20 84183.0 21 88774.0 22 71713.0 23 54652.0 24 58201.0 25 61750.0 26 61750.0 27 65724.5 28 69699.0 29 72017.0 30 74335.0 31 78885.0 32 83435.0 33 83435.0 34 90348.0 35 97261.0 36 105610.0 37 113959.0 38 117420.5 39 120882.0 40 120882.0 41 126763.0 42 132644.0 43 155576.0 44 178508.0 45 234717.0 46 290926.0 47 290926.0 48 292799.0 49 294672.0 50 263718.5 51 232765.0 52 214433.5 53 196102.0 54 196102.0 55 168457.5 56 140813.0 57 112590.0 58 84367.0 59 72110.5 60 59854.0 61 59854.0 62 52127.5 63 44401.0 64 38214.5 65 32028.0 66 26644.5 67 21261.0 68 21261.0 69 17577.5 70 13894.0 71 11435.5 72 8977.0 73 7192.0 74 5407.0 75 5407.0 76 4166.0 77 2925.0 78 2303.5 79 1682.0 80 1338.5 81 995.0 82 995.0 83 759.0 84 523.0 85 399.5 86 276.0 87 228.0 88 180.0 89 180.0 90 139.0 91 98.0 92 61.0 93 24.0 94 15.0 95 6.0 96 6.0 97 4.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2732554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.513988155269985 #Duplication Level Percentage of deduplicated Percentage of total 1 73.11666539803491 28.891310504907903 2 14.09917462043869 11.142292379021951 3 5.253443695094538 6.227535358270302 4 2.494525521331179 3.942746076115956 5 1.3498504966416176 2.666898826784109 6 0.8057743837018518 1.9103615672048964 7 0.5174496454897348 1.4312549413981028 8 0.3501998206659182 1.1070233252616613 9 0.2588754917360904 0.9206282802734611 >10 1.4835277597933623 11.167064352447472 >50 0.15327414108646137 4.217972869181157 >100 0.09644279119639242 7.085365312460628 >500 0.010960177794246823 2.879354969325115 >1k 0.00824355252900608 6.942425840383709 >5k 7.4941386627328E-4 2.29036571298863 >10k+ 8.430905995574399E-4 7.177399683974954 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40075 1.4665766897927726 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39226 1.4355068554912365 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34811 1.273936397963224 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 21414 0.783662463761009 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13341 0.48822456939551795 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11913 0.43596576682473615 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11413 0.4176678667649386 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11149 0.4080065755333655 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10561 0.3864882450630436 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9370 0.34290264712060586 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8916 0.32628815386630966 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 8726 0.3193349518435866 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8399 0.30736812520447904 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7279 0.26638082907053257 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7109 0.2601595430502014 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 6155 0.2252471497361077 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5922 0.21672032830824203 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4886 0.17880707938434154 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4815 0.1762087775758503 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4756 0.17404962536879418 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4332 0.15853300611808585 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4274 0.15641044971114934 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3996 0.14623681727790191 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3846 0.14074744725996266 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3740 0.1368682924472856 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3624 0.13262317963341255 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3302 0.12083933199490293 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3160 0.11564272837792043 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3061 0.11201974416608053 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3059 0.11194655256584134 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3054 0.11176357356524336 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3026 0.1107388911618947 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2869 0.10499335054311827 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2864 0.10481037154252029 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2784 0.10188270753295268 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2778 0.10166313273223511 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 3.6595800119595075E-5 0.0 0.0 0.0 0.0 9 3.6595800119595075E-5 0.0 0.0 1.463832004783803E-4 0.0 10 3.6595800119595075E-5 3.6595800119595075E-5 0.0 2.927664009567606E-4 0.0 11 3.6595800119595075E-5 3.6595800119595075E-5 0.0 4.75745401554736E-4 0.0 12 3.6595800119595075E-5 3.6595800119595075E-5 0.0 9.51490803109472E-4 0.0 13 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.0012442572040662326 0.0 14 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.0014638320047838029 0.0 15 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.0021591522070561094 0.0 16 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.003769367412318293 0.0 17 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.005782136418896021 0.0 18 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.006550648221407518 0.0 19 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.007721713825234561 0.0 20 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.00995405763252986 0.0 21 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.014455341047240054 0.0 22 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.024994931481683438 0.0 23 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.0401089969310762 0.0 24 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.06104179459948458 0.0 25 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.07019074462938335 0.0 26 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.08084012246418552 0.0 27 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.1612410953269359 0.0 28 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.24244717579231737 0.0 29 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.34099966551438693 0.0 30 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.5441795477783787 0.0 31 3.6595800119595075E-5 3.6595800119595075E-5 0.0 0.8194531562779729 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8705 0.0 31.410683 1 GTATTGG 705 0.0 24.666666 1 ATTGGAC 750 0.0 22.693335 3 TATACCG 160 0.0 21.968752 5 TATTGGA 865 0.0 19.46243 2 GGACCCT 1430 0.0 18.888113 6 TTGGACC 1530 0.0 18.5 4 CAATGCG 100 2.8785325E-7 18.5 19 GTATCAA 15320 0.0 18.22226 2 TGGACCC 1580 0.0 17.094936 5 TCCGATA 65 0.0015806868 17.076923 8 CGTCTGT 890 0.0 17.044943 34 GACCCTC 1675 0.0 16.34627 7 TTTTTAC 2160 0.0 16.101852 1 ACCGACC 220 0.0 15.977273 8 CGAACGA 70 0.002593719 15.857143 16 CGCCGGA 140 3.4786353E-8 15.857143 14 TGCGACG 105 9.352443E-6 15.857142 22 CGGGATA 225 0.0 15.622222 24 CTGTGCG 135 3.977675E-7 15.074075 9 >>END_MODULE