##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088190_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1505676 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.356530222969617 31.0 30.0 33.0 27.0 34.0 2 30.716249711093223 31.0 31.0 34.0 27.0 34.0 3 30.908660296106202 31.0 31.0 34.0 27.0 34.0 4 34.95005964098518 35.0 35.0 37.0 32.0 37.0 5 34.778575204758525 35.0 35.0 37.0 32.0 37.0 6 34.83497711327005 35.0 35.0 37.0 32.0 37.0 7 34.65240064927647 35.0 35.0 37.0 30.0 37.0 8 34.765102186659014 35.0 35.0 37.0 32.0 37.0 9 36.22208894875126 38.0 35.0 39.0 32.0 39.0 10 36.04702273264633 38.0 35.0 39.0 31.0 39.0 11 36.10346648282898 38.0 35.0 39.0 31.0 39.0 12 35.909074727896304 37.0 35.0 39.0 30.0 39.0 13 36.00170953113419 37.0 35.0 39.0 30.0 39.0 14 36.852409150441396 38.0 36.0 40.0 31.0 41.0 15 36.921050743984765 38.0 36.0 40.0 31.0 41.0 16 36.86674291148959 38.0 36.0 40.0 31.0 41.0 17 36.961154325366145 38.0 36.0 40.0 31.0 41.0 18 36.96434956790173 38.0 36.0 40.0 31.0 41.0 19 37.07199822538182 39.0 36.0 40.0 31.0 41.0 20 37.033137939370754 39.0 36.0 40.0 31.0 41.0 21 36.93116912270634 39.0 36.0 40.0 31.0 41.0 22 36.86528044546104 39.0 36.0 40.0 31.0 41.0 23 36.739532276532266 38.0 35.0 40.0 30.0 41.0 24 36.66496045630003 38.0 35.0 40.0 30.0 41.0 25 36.56294049981537 38.0 35.0 40.0 30.0 41.0 26 36.28194777628122 38.0 35.0 40.0 30.0 41.0 27 36.12048541651723 38.0 35.0 40.0 30.0 41.0 28 35.96620786942211 38.0 34.0 40.0 29.0 41.0 29 35.83471942170826 38.0 34.0 40.0 29.0 41.0 30 35.648683382082204 38.0 34.0 40.0 28.0 41.0 31 35.394758898992876 38.0 34.0 40.0 27.0 41.0 32 35.091072714182864 37.0 33.0 40.0 27.0 41.0 33 35.27316700272834 38.0 34.0 40.0 27.0 41.0 34 35.255162465231564 38.0 34.0 40.0 27.0 41.0 35 35.16224539675203 38.0 33.0 40.0 26.0 41.0 36 35.06271933669661 38.0 33.0 40.0 26.0 41.0 37 34.93744470922031 38.0 33.0 40.0 25.0 41.0 38 34.8018730457283 38.0 33.0 40.0 25.0 41.0 39 34.75873029788613 38.0 33.0 40.0 24.0 41.0 40 34.59511940151799 38.0 33.0 40.0 24.0 41.0 41 34.467520900910955 38.0 33.0 40.0 23.0 41.0 42 34.260655678911 38.0 33.0 40.0 23.0 41.0 43 33.911243189105754 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 12.0 16 29.0 17 58.0 18 156.0 19 360.0 20 718.0 21 1434.0 22 2618.0 23 4360.0 24 7238.0 25 11141.0 26 16754.0 27 23828.0 28 32715.0 29 43076.0 30 54404.0 31 66754.0 32 80206.0 33 95833.0 34 114836.0 35 136314.0 36 167035.0 37 207986.0 38 249607.0 39 188201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.59065562577872 24.415279249984724 14.085633296937722 21.908431827298834 2 18.294506919151267 23.762283519163486 35.447599616384935 22.495609945300316 3 20.512248319027467 26.170504145646206 32.12982075825078 21.187426777075547 4 13.66575544805124 16.504413964226035 35.317757605221836 34.51207298250088 5 11.304490474710363 40.75086539202325 34.72606324335381 13.218580889912571 6 31.88740472717902 36.476373403042885 15.093220586633512 16.54300128314458 7 24.442509543885933 35.31782402057282 21.62709640055364 18.61257003498761 8 27.428942215988034 34.199854417550654 20.170873414997647 18.20032995146366 9 24.99495243332563 13.678108703333253 23.647982700129376 37.678956163211744 10 16.312008692441136 27.845632128027543 34.044376080909835 21.797983098621483 11 31.767325772609777 21.74299118801123 24.929533312611742 21.560149726767246 12 19.876321333407716 27.445213976977783 32.067058251576036 20.61140643803846 13 31.00779981881892 20.65411150871768 28.990566363547003 19.347522308916393 14 20.80852719974284 22.471966080351947 28.60502525111644 28.11448146878877 15 23.081127679527334 29.151822835722957 26.82569158304974 20.941357901699966 16 21.730438686676283 28.36699263320927 27.34180527550416 22.560763404610288 17 19.448606473105766 27.273264633294282 28.291744040550558 24.986384853049394 18 20.39881089955608 26.257641086130086 32.42297811747016 20.920569896843677 19 19.75312085734248 24.95742776002274 33.86332783414227 21.426123548492505 20 23.870009218450715 23.994538001535524 32.667253778369314 19.468199001644443 21 23.578113750899927 24.593272390607275 31.351897752238862 20.476716106253935 22 21.894551018944313 24.3137301783385 32.187668528953104 21.604050273764077 23 20.919772912631935 26.342320658627756 33.11575664352756 19.622149785212756 24 19.763680898148074 25.427183537494123 31.617691986855075 23.191443577502728 25 20.79232185410407 26.326779466498767 32.6756885279436 20.205210151453567 26 21.99510386032586 25.389791694893194 31.42907239007595 21.186032054704995 27 21.027100119813294 26.70036581575319 31.095800158865522 21.176733905568 28 20.626084230604725 26.303733339709208 31.316896862273158 21.75328556741291 29 19.883361360611445 26.079913606911447 32.034581144947516 22.002143887529588 30 19.17756542576225 26.31409413446186 33.86651577098924 20.641824668786647 31 20.666398348648713 25.667142200579672 32.71640113809345 20.95005831267816 32 21.425725056386632 26.078253223136983 30.935539916954248 21.560481803522137 33 22.31894511169734 26.072873579707718 30.371540756444283 21.23664055215066 34 20.82612726775216 28.405048629319985 30.543622930829738 20.225201172098114 35 19.521132036374357 29.381752780810743 30.661842255571585 20.43527292724331 36 20.513775872099973 25.97172300016737 32.62713890637826 20.887362221354394 37 20.55927038752029 26.21526809220576 31.905137625890294 21.32032389438365 38 20.859401358592418 25.8721663890505 32.3165807252025 20.95185152715458 39 21.737478713880012 25.42612089187847 32.126035083245 20.710365310996522 40 20.14676464259243 26.324255683161585 31.3288516254493 22.200128048796685 41 20.94780019074489 25.85775425788815 31.15816417343439 22.03628137793257 42 18.77561972163998 27.54211397405551 31.383511459304657 22.298754844999856 43 19.375283925625432 27.210767788023453 31.09035410008528 22.323594186265836 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 136.0 2 203.0 3 501.0 4 799.0 5 799.0 6 1538.0 7 2277.0 8 2524.0 9 2771.0 10 4372.5 11 5974.0 12 5974.0 13 11167.0 14 16360.0 15 27264.0 16 38168.0 17 37288.5 18 36409.0 19 36409.0 20 39255.5 21 42102.0 22 34558.0 23 27014.0 24 28996.5 25 30979.0 26 30979.0 27 34121.0 28 37263.0 29 39391.0 30 41519.0 31 44539.5 32 47560.0 33 47560.0 34 52208.5 35 56857.0 36 61870.0 37 66883.0 38 70389.0 39 73895.0 40 73895.0 41 77754.5 42 81614.0 43 91956.0 44 102298.0 45 125455.5 46 148613.0 47 148613.0 48 150506.0 49 152399.0 50 138419.0 51 124439.0 52 115180.5 53 105922.0 54 105922.0 55 91895.0 56 77868.0 57 64420.0 58 50972.0 59 45103.5 60 39235.0 61 39235.0 62 34559.5 63 29884.0 64 26260.5 65 22637.0 66 19172.0 67 15707.0 68 15707.0 69 13021.5 70 10336.0 71 8571.5 72 6807.0 73 5555.0 74 4303.0 75 4303.0 76 3328.5 77 2354.0 78 1876.5 79 1399.0 80 1114.0 81 829.0 82 829.0 83 620.0 84 411.0 85 331.0 86 251.0 87 202.5 88 154.0 89 154.0 90 131.0 91 108.0 92 64.5 93 21.0 94 15.0 95 9.0 96 9.0 97 5.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1505676.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.29859812720766 #Duplication Level Percentage of deduplicated Percentage of total 1 79.56413443359111 40.019644232143236 2 11.695566735637406 11.765412222115277 3 3.756221786957037 5.667980704164414 4 1.5715266496533173 3.161823495884371 5 0.8153309050727092 2.050500076747235 6 0.4904452914448036 1.4801226370658045 7 0.33056881898912355 1.1639003725803705 8 0.2333488182868851 0.9389694747576669 9 0.17632167247182204 0.7981859650299579 >10 1.1969986837285158 11.668048923851888 >50 0.10321384552831707 3.584011217244015 >100 0.05391199042787294 4.997969923999686 >500 0.0064053513347333835 2.3619835373603832 >1k 0.004804013501050038 4.4384348789853 >5k 8.006689168416729E-4 2.42635245501678 >10k+ 4.0033445842083647E-4 3.4766598830535878 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18740 1.2446236773382853 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17960 1.1928197035750054 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15097 1.0026725537233774 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8908 0.5916279465170462 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6302 0.41854954186690896 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5331 0.3540602360667235 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5321 0.3533960825569379 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5163 0.3429024571023248 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5124 0.3403122584141608 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4123 0.2738304920846185 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3782 0.2511828574009282 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3706 0.24613529072655738 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3668 0.24361150738937196 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3071 0.20396154285516935 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2832 0.18808827397129263 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2657 0.17646558755004396 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2413 0.16026024191127441 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2194 0.14571528004696893 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2188 0.14531678794109754 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2018 0.13402617827474173 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1861 0.1235989681711072 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1836 0.1219385843966431 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1745 0.1158947874575938 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1743 0.11576195675563666 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1730 0.11489855719291535 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1661 0.11031589797539443 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.3283070195712756E-4 0.0 10 0.0 0.0 0.0 2.656614039142551E-4 0.0 11 0.0 0.0 0.0 3.3207675489281893E-4 0.0 12 0.0 0.0 0.0 7.305688607642016E-4 0.0 13 0.0 0.0 0.0 7.969842117427654E-4 0.0 14 0.0 0.0 0.0 0.001195476317614148 0.0 15 0.0 0.0 0.0 0.0017932144764212221 0.0 16 0.0 0.0 0.0 0.00245736798620686 0.0 17 0.0 0.0 0.0 0.004250582462628082 0.0 18 0.0 0.0 0.0 0.004781905270456592 0.0 19 0.0 0.0 0.0 0.005711720184156485 0.0 20 0.0 0.0 0.0 0.007438519309599143 0.0 21 0.0 0.0 0.0 0.009364564487977492 0.0 22 0.0 0.0 0.0 0.01580685353289818 0.0 23 0.0 6.641535097856378E-5 0.0 0.02563632547772562 0.0 24 0.0 6.641535097856378E-5 0.0 0.039583549183224015 0.0 25 0.0 6.641535097856378E-5 0.0 0.045228854016401934 0.0 26 0.0 6.641535097856378E-5 0.0 0.052069635167194005 0.0 27 0.0 6.641535097856378E-5 0.0 0.10832343744603752 0.0 28 0.0 6.641535097856378E-5 0.0 0.16696819236010935 0.0 29 0.0 6.641535097856378E-5 0.0 0.23604015737781567 0.0 30 0.0 6.641535097856378E-5 0.0 0.37557880978377817 0.0 31 0.0 6.641535097856378E-5 0.0 0.5865139644916968 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4210 0.0 30.760096 1 GCGACCT 45 4.009342E-6 28.777779 34 GTATTGG 480 0.0 23.895834 1 ATTGGAC 560 0.0 20.151787 3 GTATCAA 6985 0.0 18.804583 2 TATTGGA 650 0.0 18.784615 2 CTACGAT 50 0.0070358687 18.5 14 TTGGACC 920 0.0 18.097826 4 CGACGAG 85 2.7240236E-5 17.411764 24 GGACCCT 895 0.0 17.156424 6 AAGACCG 65 0.0015802414 17.076923 5 TGGACCC 1000 0.0 16.835 5 GCGACGA 100 5.8802234E-6 16.650002 23 CGAATTA 80 3.3834364E-4 16.1875 15 GACCCTC 965 0.0 15.911918 7 GGGTACT 70 0.002592994 15.857143 1 CGGTCAG 70 0.002592994 15.857143 10 ACGGACC 75 0.0041051917 14.8 8 GCTACGA 75 0.0041051917 14.8 13 ACGTTTA 115 2.2106326E-5 14.478261 26 >>END_MODULE