##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088188_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2025584 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.552462894651615 31.0 31.0 33.0 28.0 34.0 2 30.932575000592422 31.0 31.0 34.0 28.0 34.0 3 31.097498795409127 31.0 31.0 34.0 28.0 34.0 4 35.135704073491894 35.0 35.0 37.0 32.0 37.0 5 34.99943028775899 35.0 35.0 37.0 32.0 37.0 6 35.04848922582327 36.0 35.0 37.0 32.0 37.0 7 34.85124339449759 36.0 35.0 37.0 32.0 37.0 8 34.98156284804777 36.0 35.0 37.0 32.0 37.0 9 36.434728453621275 38.0 35.0 39.0 32.0 39.0 10 36.3212584617572 38.0 35.0 39.0 32.0 39.0 11 36.37125441354197 38.0 35.0 39.0 32.0 39.0 12 36.19700441946619 38.0 35.0 39.0 32.0 39.0 13 36.280116252892995 38.0 35.0 39.0 32.0 39.0 14 37.14015760393052 39.0 36.0 41.0 31.0 41.0 15 37.22055713315271 39.0 36.0 41.0 32.0 41.0 16 37.176031702462105 39.0 36.0 41.0 32.0 41.0 17 37.317125332743544 39.0 36.0 41.0 32.0 41.0 18 37.35301522918822 39.0 36.0 40.0 32.0 41.0 19 37.46988473447657 39.0 36.0 41.0 32.0 41.0 20 37.43079181115175 39.0 36.0 41.0 32.0 41.0 21 37.34207221226076 39.0 36.0 41.0 31.0 41.0 22 37.287562500493685 39.0 36.0 41.0 31.0 41.0 23 37.1724544625155 39.0 36.0 40.0 31.0 41.0 24 37.09534583606506 39.0 36.0 40.0 31.0 41.0 25 36.99838565075554 39.0 35.0 40.0 31.0 41.0 26 36.6893764958649 38.0 35.0 40.0 30.0 41.0 27 36.52406910797084 38.0 35.0 40.0 30.0 41.0 28 36.34624878553543 38.0 35.0 40.0 30.0 41.0 29 36.20478489166581 38.0 35.0 40.0 30.0 41.0 30 35.996473609586175 38.0 35.0 40.0 30.0 41.0 31 35.671021295586854 38.0 34.0 40.0 29.0 41.0 32 35.33226121454356 37.0 34.0 40.0 27.0 41.0 33 35.39324165277767 38.0 34.0 40.0 27.0 41.0 34 35.334273473724124 38.0 34.0 40.0 27.0 41.0 35 35.19549769350469 38.0 34.0 40.0 27.0 41.0 36 35.04110913198367 38.0 34.0 40.0 25.0 41.0 37 34.864587200530806 38.0 33.0 40.0 25.0 41.0 38 34.67491400011058 38.0 33.0 40.0 24.0 41.0 39 34.53143093547342 38.0 33.0 40.0 23.0 41.0 40 34.28732306337333 38.0 33.0 40.0 22.0 41.0 41 34.07492012180191 38.0 33.0 40.0 21.0 41.0 42 33.798191533898375 38.0 33.0 40.0 18.0 41.0 43 33.40898131106881 37.0 33.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 3.0 14 4.0 15 11.0 16 27.0 17 75.0 18 177.0 19 428.0 20 878.0 21 1762.0 22 3079.0 23 5388.0 24 8689.0 25 13571.0 26 20332.0 27 29688.0 28 40820.0 29 55249.0 30 69484.0 31 84693.0 32 102988.0 33 124532.0 34 150555.0 35 178767.0 36 220209.0 37 281791.0 38 317775.0 39 314607.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.642098278817365 24.46879517215776 15.049437594293794 20.83966895473108 2 17.26800764618994 23.634961571576397 36.521812968506865 22.575217813726805 3 20.390860117378494 25.76022519925118 33.046222718978825 20.802691964391503 4 12.976307079834754 15.733882179164132 34.398573448447465 36.891237292553654 5 10.425832747494056 41.735914185736064 34.129367135601385 13.708885931168494 6 31.2919632066604 35.38115427452034 15.184954067567674 18.14192845125159 7 23.254972393146865 36.99278825267182 20.850826230854906 18.901413123326407 8 28.239954502010285 33.28230278280239 20.12185127844612 18.355891436741206 9 24.700530809880014 13.796663085806365 25.333039755448304 36.169766348865316 10 16.47840820227648 28.783748291850646 33.236390097868075 21.501453408004803 11 30.15490841159883 22.013009581434293 25.717521465414418 22.11456054155246 12 20.053130356479908 28.612785251068335 31.78406819959083 19.550016192860923 13 31.18596908348407 21.552056098389404 30.030154266621377 17.231820551505145 14 20.51571299931279 23.54896168216179 29.953633125064176 25.981692193461242 15 22.516814903751214 29.54737991611308 28.366041595905177 19.56976358423052 16 20.82303177750219 28.5158255594436 28.703870093760614 21.957272569293597 17 17.98681269204338 27.798057251637058 29.07131967867045 25.14381037764911 18 18.908127236392072 26.6120782944573 34.99400666671932 19.485787802431297 19 18.179399126375408 25.16266913640708 36.79847392159496 19.859457815622555 20 23.342947021698436 23.684724997827786 35.17336234883372 17.79896563164006 21 22.71596734571363 24.777298793829335 33.43282727351717 19.073906586939867 22 20.339862479166502 24.659456235831247 34.366434568993434 20.634246716008814 23 19.39643085648386 27.129706790732943 35.56283027512065 17.911032077662544 24 17.69603235412602 26.176352103887073 33.78921831926003 22.338397222726876 25 19.05618330318565 27.259891468337035 35.367429837518465 18.316495390958853 26 20.69511804990561 25.799176928727714 33.65597279599365 19.849732225373028 27 19.2979901105064 27.49690953325066 33.01704594823024 20.1880544080127 28 18.835358099195094 27.043410690447793 33.23866104787558 20.882570162481535 29 17.76193927282206 27.05590091548906 34.28443352633117 20.897726285357702 30 17.00921808229133 27.008902124029415 37.08940236494759 18.892477428731663 31 18.75503558479925 26.296909928198488 35.408405674610385 19.53964881239188 32 20.053574672785725 26.850676150680496 32.970837052425374 20.124912124108405 33 21.211956650526464 26.761812889517294 32.152998838853385 19.873231621102853 34 19.01757715305808 29.93467562934936 32.35303991342743 18.69470730416512 35 17.34206036382594 30.866851238951337 32.42111904517414 19.369969352048592 36 18.602931302774902 26.58773963459427 35.11979754974368 19.68953151288715 37 18.429351732636118 26.916928648725502 34.092143302869694 20.561576315768686 38 19.14233129803553 26.455086533068982 34.61224022306653 19.790341945828956 39 20.437365224053902 25.792215973269933 34.184758568393114 19.58566023428305 40 18.25177331574499 26.779980489577326 33.32707999273296 21.641166201944724 41 19.30623464640321 26.110938869975275 33.056392625534166 21.526433858087344 42 16.45831523155791 27.85596647682841 33.59248493274038 22.09323335887329 43 17.109090514143084 27.70405966871776 33.24167252505944 21.945177292079716 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 162.0 1 285.5 2 409.0 3 1143.5 4 1878.0 5 1878.0 6 3358.0 7 4838.0 8 5564.5 9 6291.0 10 9624.5 11 12958.0 12 12958.0 13 23470.0 14 33982.0 15 55601.5 16 77221.0 17 74124.5 18 71028.0 19 71028.0 20 74140.0 21 77252.0 22 61001.5 23 44751.0 24 46843.0 25 48935.0 26 48935.0 27 51550.5 28 54166.0 29 54622.5 30 55079.0 31 58612.5 32 62146.0 33 62146.0 34 66100.0 35 70054.0 36 75168.5 37 80283.0 38 83302.0 39 86321.0 40 86321.0 41 90489.5 42 94658.0 43 110918.0 44 127178.0 45 169730.5 46 212283.0 47 212283.0 48 215643.0 49 219003.0 50 195820.0 51 172637.0 52 156461.0 53 140285.0 54 140285.0 55 119606.0 56 98927.0 57 77264.5 58 55602.0 59 46347.0 60 37092.0 61 37092.0 62 31983.5 63 26875.0 64 22803.0 65 18731.0 66 15779.0 67 12827.0 68 12827.0 69 10698.0 70 8569.0 71 7162.5 72 5756.0 73 4587.0 74 3418.0 75 3418.0 76 2678.0 77 1938.0 78 1515.5 79 1093.0 80 782.5 81 472.0 82 472.0 83 359.5 84 247.0 85 188.0 86 129.0 87 98.0 88 67.0 89 67.0 90 49.0 91 31.0 92 20.5 93 10.0 94 6.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2025584.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.27632729869066 #Duplication Level Percentage of deduplicated Percentage of total 1 69.60217333400921 24.553090472307083 2 14.221294987467076 10.03350113178235 3 5.984737089884578 6.333586331381456 4 3.1201584087528094 4.4027091700370375 5 1.8424951796431093 3.249823150167509 6 1.1596092828769868 2.4544053960821133 7 0.7721739615813327 1.9067622980188776 8 0.5528643528878852 1.560241909140148 9 0.4008575326736385 1.2726703370466772 >10 2.057569685646628 13.29081983250754 >50 0.16554697414905928 4.02865385828046 >100 0.09536407221401225 6.644302172412803 >500 0.011511673419881869 2.7214517960885605 >1k 0.011511673419881869 7.83582392132818 >5k 0.0014211942493681318 3.475274341010315 >10k+ 7.105971246840659E-4 6.236883882408953 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35355 1.7454225546805269 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34549 1.7056315610707826 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29103 1.4367708275736775 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13116 0.6475169630091865 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12280 0.6062449150467223 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9367 0.46243453739760976 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8632 0.42614870575596964 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7780 0.38408676213872145 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7335 0.36211778924004134 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6714 0.33145996413873724 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6620 0.3268193271668812 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6050 0.29867929446520114 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5753 0.28401685637327306 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5673 0.28006737809935306 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5395 0.266342941097481 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4948 0.24427523124195294 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4548 0.22452783987235284 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4272 0.2109021398273288 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4097 0.2022626561031288 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3838 0.18947622019131272 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3721 0.1837001082157047 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3608 0.17812147015379268 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3048 0.15047512223635257 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2955 0.14588385374292057 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2907 0.14351416677856854 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2845 0.14045332111628056 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2826 0.13951532002622452 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2799 0.13818237110877654 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2720 0.13428226131328053 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2526 0.12470477649902448 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2491 0.12297687975418446 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2485 0.12268066888364047 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2478 0.12233508953467247 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2468 0.12184140475043247 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2454 0.12115024605249647 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 2257 0.11142465580296843 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2191 0.10816633622698442 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2180 0.1076232829643204 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 2172 0.10722833513692842 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2126 0.10495738512942442 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2090 0.1031801199061604 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 2033 0.10036611663599238 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.936847842400019E-5 0.0 0.0 0.0 0.0 2 4.936847842400019E-5 0.0 0.0 0.0 0.0 3 4.936847842400019E-5 0.0 0.0 0.0 0.0 4 4.936847842400019E-5 0.0 0.0 0.0 0.0 5 4.936847842400019E-5 0.0 0.0 0.0 0.0 6 1.9747391369600076E-4 0.0 0.0 0.0 0.0 7 2.4684239212000096E-4 0.0 0.0 0.0 0.0 8 4.443163058160017E-4 0.0 0.0 4.936847842400019E-5 0.0 9 4.443163058160017E-4 0.0 0.0 4.936847842400019E-5 0.0 10 4.443163058160017E-4 0.0 0.0 4.936847842400019E-5 0.0 11 4.443163058160017E-4 0.0 0.0 1.4810543527200056E-4 0.0 12 4.443163058160017E-4 0.0 0.0 2.4684239212000096E-4 0.0 13 4.936847842400019E-4 0.0 0.0 3.4557934896800135E-4 0.0 14 4.936847842400019E-4 0.0 0.0 6.417902195120025E-4 0.0 15 4.936847842400019E-4 0.0 0.0 0.001086106525328004 0.0 16 4.936847842400019E-4 0.0 0.0 0.002172213050656008 0.0 17 4.936847842400019E-4 0.0 0.0 0.003406425011256013 0.0 18 4.936847842400019E-4 0.0 0.0 0.004295057622888017 0.0 19 4.936847842400019E-4 0.0 0.0 0.004986216320824019 0.0 20 4.936847842400019E-4 0.0 0.0 0.0061216913245760235 0.0 21 4.936847842400019E-4 0.0 0.0 0.008935694594744035 0.0 22 4.936847842400019E-4 0.0 0.0 0.013971279393992054 0.0 23 4.936847842400019E-4 0.0 0.0 0.024536133776728093 0.0 24 4.936847842400019E-4 0.0 0.0 0.039297308825504154 0.0 25 4.936847842400019E-4 0.0 0.0 0.04778868711443218 0.0 26 4.936847842400019E-4 0.0 0.0 0.06185870346527224 0.0 27 4.936847842400019E-4 0.0 0.0 0.16696419402996865 0.0 28 4.936847842400019E-4 0.0 0.0 0.2745381085158651 0.0 29 4.936847842400019E-4 0.0 0.0 0.3921831926002575 0.0 30 4.936847842400019E-4 0.0 0.0 0.6310278912155705 0.0 31 4.936847842400019E-4 0.0 0.0 0.9640676466638757 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7510 0.0 29.363516 1 TATGCCG 75 1.3749741E-8 24.666666 33 GTATTGG 465 0.0 21.483871 1 ATTGGAC 520 0.0 20.634615 3 TAGGTCG 60 9.240129E-4 18.5 21 CGTCTGT 915 0.0 18.19672 34 CGATCTG 280 0.0 17.839285 33 GTTATCA 280 0.0 17.839285 1 CCGTCTT 105 4.801732E-7 17.61905 37 GTATCAA 12860 0.0 17.478617 2 TTTTTAC 1595 0.0 17.050156 1 TTGGACC 1205 0.0 16.73444 4 TATTGGA 665 0.0 16.69173 2 TGCGTTA 90 4.4486504E-5 16.444445 37 TATCACG 80 3.384158E-4 16.1875 2 TGGACCC 1235 0.0 16.02834 5 ACGATCT 290 0.0 15.948276 32 GGTCGTC 70 0.0025934093 15.857142 23 GGACCCT 1245 0.0 15.751004 6 ACGTTTA 130 2.5916052E-7 15.653846 26 >>END_MODULE