##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088187_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1974257 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.538366585505333 31.0 31.0 33.0 28.0 34.0 2 30.92554363489657 31.0 31.0 34.0 27.0 34.0 3 31.104576557155426 31.0 31.0 34.0 28.0 34.0 4 35.13864861565642 35.0 35.0 37.0 32.0 37.0 5 34.9959787403565 35.0 35.0 37.0 32.0 37.0 6 35.045285390909086 36.0 35.0 37.0 32.0 37.0 7 34.85701506946664 36.0 35.0 37.0 32.0 37.0 8 34.97930461940872 36.0 35.0 37.0 32.0 37.0 9 36.436700996881356 38.0 35.0 39.0 32.0 39.0 10 36.31819869449621 38.0 35.0 39.0 32.0 39.0 11 36.37198044631474 38.0 35.0 39.0 32.0 39.0 12 36.20605321394327 38.0 35.0 39.0 32.0 39.0 13 36.285721666429446 38.0 35.0 39.0 32.0 39.0 14 37.15751242112856 39.0 36.0 41.0 31.0 41.0 15 37.23037274275841 39.0 36.0 41.0 32.0 41.0 16 37.19034603904152 39.0 36.0 41.0 32.0 41.0 17 37.32369949808966 39.0 36.0 41.0 32.0 41.0 18 37.35892186275647 39.0 36.0 40.0 32.0 41.0 19 37.46828553729327 39.0 36.0 41.0 32.0 41.0 20 37.43830210555161 39.0 36.0 41.0 32.0 41.0 21 37.33942693377813 39.0 36.0 41.0 31.0 41.0 22 37.286734199245586 39.0 36.0 41.0 31.0 41.0 23 37.180754076090395 39.0 36.0 40.0 31.0 41.0 24 37.10477865850292 39.0 36.0 40.0 31.0 41.0 25 37.01171225428098 39.0 35.0 40.0 31.0 41.0 26 36.714402937408856 38.0 35.0 40.0 30.0 41.0 27 36.53951739819081 38.0 35.0 40.0 30.0 41.0 28 36.37752430407996 38.0 35.0 40.0 30.0 41.0 29 36.231459227446074 38.0 35.0 40.0 30.0 41.0 30 36.03671254552979 38.0 35.0 40.0 30.0 41.0 31 35.7344140099288 38.0 34.0 40.0 29.0 41.0 32 35.41370196484044 38.0 34.0 40.0 27.0 41.0 33 35.47884393977076 38.0 34.0 40.0 28.0 41.0 34 35.427589214575406 38.0 34.0 40.0 27.0 41.0 35 35.29541037463714 38.0 34.0 40.0 27.0 41.0 36 35.15618787219698 38.0 34.0 40.0 26.0 41.0 37 34.98953732973975 38.0 34.0 40.0 25.0 41.0 38 34.81161419207327 38.0 33.0 40.0 24.0 41.0 39 34.69428853487666 38.0 33.0 40.0 24.0 41.0 40 34.46110156884337 38.0 33.0 40.0 23.0 41.0 41 34.279924042310604 38.0 33.0 40.0 21.0 41.0 42 34.02615768868997 38.0 33.0 40.0 19.0 41.0 43 33.64230036920219 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 6.0 15 5.0 16 24.0 17 50.0 18 165.0 19 407.0 20 829.0 21 1680.0 22 2938.0 23 5035.0 24 8326.0 25 13137.0 26 19618.0 27 28412.0 28 39458.0 29 52628.0 30 67049.0 31 81616.0 32 99313.0 33 120012.0 34 144823.0 35 172667.0 36 211878.0 37 270408.0 38 311458.0 39 322313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.39026175416878 24.684830799637535 14.930629598882009 20.994277847311672 2 17.24709599611398 23.745439423540095 36.694564081576004 22.312900498769917 3 20.085834822923257 25.96804772630919 33.26157638038006 20.684541070387493 4 12.868638682805733 15.952127813146921 34.87306870382124 36.30616480022611 5 10.361822194374897 41.688392139422575 34.46005256661114 13.489733099591392 6 30.903119502678727 35.96061708278101 15.35580220812184 17.780461206418416 7 23.078150413041463 37.14491071831073 21.173028638115504 18.603910230532296 8 27.811120841916733 33.810238484655244 20.266966256166246 18.111674417261785 9 24.782538443576495 13.876967385705102 25.374761239291544 35.96573293142686 10 16.233600792601976 28.875521272053234 33.62738488454137 21.26349305080342 11 30.029525031442205 22.138759036944027 25.97265705528713 21.85905887632664 12 19.83414519994104 28.660858236794905 32.17787755089636 19.327119012367692 13 30.8829093679293 21.658679695703245 30.208681037980362 17.249729898387088 14 20.139576559688024 23.630965978593466 30.10281842738813 26.126639034330385 15 22.253029874023493 29.721003901720998 28.5762694522547 19.449696772000806 16 20.502497901742274 28.870810639141713 28.889602518821007 21.737088940295006 17 17.903798745553388 28.030747769920534 29.31685185869925 24.74860162582683 18 18.847242278994074 27.023736018157717 34.81446437824457 19.314557324603634 19 18.160908128982197 25.53664492515412 36.60546727199144 19.696979673872246 20 23.210706610132316 23.964610483842783 35.063975966654795 17.760706939370102 21 22.35489097923928 25.1515886736124 33.53479308924826 18.95872725790006 22 20.275577090520635 24.915702464268836 34.327952237221396 20.480768207989133 23 19.283811580761775 27.25384790328716 35.49968418498706 17.962656330964002 24 17.565646215259715 26.39068773720949 33.823256040120405 22.220410007410383 25 18.96237419950898 27.417605711920988 35.32123730598397 18.298782782586056 26 20.610487894939716 25.997476519014494 33.59192850778799 19.800107078257795 27 19.216950984598256 27.749274790465478 33.0170793366821 20.016694888254165 28 18.82642432064316 27.135727516731613 33.172834134563026 20.865014028062205 29 17.648259573095093 27.15330374920793 34.443337417570255 20.755099260126723 30 17.04509595255329 27.015986267238763 37.05677629609519 18.882141484112758 31 18.74659682098126 26.553179246673558 35.19172022690055 19.508503705444628 32 20.139880471488766 26.954646735455412 32.97594993964818 19.929522853407637 33 21.166798446200268 26.8025895311502 32.236937744174135 19.793674278475397 34 19.070414844673213 29.87503653273105 32.35870507233861 18.695843550257134 35 17.418704859600346 30.66323178795871 32.53234001449659 19.38572333794435 36 18.532187045556885 26.526890875909263 35.23239375623336 19.70852832230049 37 18.579090766804928 26.750924525023844 34.196459731433144 20.473524976738084 38 19.133932411028553 26.330361244761953 34.82869758091272 19.707008763296773 39 20.421353450943826 25.699541650352515 34.377439208775755 19.501665689927908 40 18.273558103124365 26.631436535364948 33.55160954222272 21.543395819287962 41 19.225105951251535 25.972302491519596 33.30240186561324 21.50018969161563 42 16.394370135195164 27.94403160277512 33.741149201952936 21.920449060076777 43 17.151819646580968 27.72009925759412 33.339783017104665 21.788298078720246 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 261.0 1 309.0 2 357.0 3 1080.5 4 1804.0 5 1804.0 6 3165.5 7 4527.0 8 5111.5 9 5696.0 10 8641.0 11 11586.0 12 11586.0 13 21083.0 14 30580.0 15 50379.0 16 70178.0 17 68484.0 18 66790.0 19 66790.0 20 70743.5 21 74697.0 22 60366.0 23 46035.0 24 49116.5 25 52198.0 26 52198.0 27 55125.5 28 58053.0 29 58505.0 30 58957.0 31 62953.0 32 66949.0 33 66949.0 34 70634.0 35 74319.0 36 78652.0 37 82985.0 38 84890.0 39 86795.0 40 86795.0 41 91176.5 42 95558.0 43 111299.5 44 127041.0 45 167910.5 46 208780.0 47 208780.0 48 209649.5 49 210519.0 50 185894.0 51 161269.0 52 144559.0 53 127849.0 54 127849.0 55 108980.5 56 90112.0 57 70023.5 58 49935.0 59 42211.0 60 34487.0 61 34487.0 62 29684.0 63 24881.0 64 21262.0 65 17643.0 66 14787.0 67 11931.0 68 11931.0 69 10259.0 70 8587.0 71 7017.0 72 5447.0 73 4423.0 74 3399.0 75 3399.0 76 2647.5 77 1896.0 78 1463.5 79 1031.0 80 794.5 81 558.0 82 558.0 83 434.0 84 310.0 85 224.5 86 139.0 87 108.0 88 77.0 89 77.0 90 54.0 91 31.0 92 19.0 93 7.0 94 4.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1974257.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.48167793952348 #Duplication Level Percentage of deduplicated Percentage of total 1 71.00396061372676 25.9034362354059 2 13.989521065185825 10.207224040565773 3 5.73456564577387 6.276197310365333 4 2.885250108187493 4.2103506088748555 5 1.6572297588973333 3.0229261167943324 6 1.0415458161494604 2.2798403414413646 7 0.6680941451784215 1.706123680637629 8 0.4823695831014533 1.407812142282354 9 0.3699738673564816 1.2147540727445223 >10 1.8773400266501963 12.579702405688773 >50 0.1595139072242448 4.08423393369897 >100 0.10608872518581493 7.699979152794177 >500 0.012414441894677676 3.097216159183366 >1k 0.010016197437751307 7.001725981925228 >5k 0.0014107320334860998 3.3748230711580263 >10k+ 7.053660167430499E-4 5.933654746439478 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32466 1.6444667538218174 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31960 1.618836858625802 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26979 1.3665394120421 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12960 0.6564494896054566 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10928 0.5535246930870702 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8948 0.45323379884179216 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7764 0.3932618701617875 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7654 0.3876901538148275 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6648 0.33673427522353977 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6613 0.33496145638587077 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6274 0.31779043964387615 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5760 0.29175532871353627 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5709 0.28917207840721854 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5126 0.2596419817683311 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5078 0.25721068736238495 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4707 0.23841880768309293 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4116 0.20848349530988114 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3810 0.19298399347197454 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3801 0.19252812577085962 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3620 0.18336011978177105 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3391 0.17176081938673637 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3380 0.1712036477520404 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2962 0.15003112563359278 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2780 0.1408124676777137 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2655 0.13448097182889562 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2600 0.1316951136554157 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2557 0.12951707908342228 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2504 0.1268325248435234 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2484 0.12581948550771252 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2404 0.12176732816446896 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2390 0.12105820062940134 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2373 0.12019711719396207 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2311 0.11705669525294833 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2277 0.11533452838206981 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2258 0.11437214101304946 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2157 0.10925629236720447 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2140 0.10839520893176523 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 2122 0.10748347352953541 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 2118 0.10728086566237323 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2044 0.10353262011987294 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.0130393358108898E-4 0.0 10 0.0 0.0 0.0 2.0260786716217797E-4 0.0 11 0.0 0.0 0.0 3.545637675338115E-4 0.0 12 0.0 0.0 0.0 5.571716346959894E-4 0.0 13 0.0 0.0 0.0 7.597795018581674E-4 0.0 14 0.0 0.0 0.0 0.0011649952361825232 0.0 15 0.0 0.0 0.0 0.0017728188376690572 0.0 16 0.0 0.0 0.0 0.003191073907804303 0.0 17 0.0 0.0 0.0 0.0043560691439868265 0.0 18 0.0 0.0 0.0 0.00552106438016935 0.0 19 0.0 0.0 0.0 0.006939319450304596 0.0 20 0.0 0.0 0.0 0.008661486321183109 0.0 21 0.0 0.0 0.0 0.01251103579726449 0.0 22 0.0 0.0 0.0 0.022692081122163935 0.0 23 0.0 0.0 0.0 0.03646941608919203 0.0 24 0.0 0.0 0.0 0.055362599702065134 0.0 25 0.0 0.0 0.0 0.06620212059524165 0.0 26 0.0 0.0 0.0 0.08033401932980357 0.0 27 0.0 0.0 0.0 0.19359181707346104 0.0 28 0.0 0.0 0.0 0.3032026732081993 0.0 29 0.0 0.0 0.0 0.4259830407084792 0.0 30 0.0 0.0 0.0 0.678989614827249 0.0 31 0.0 0.0 0.0 1.022713861467884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6840 0.0 31.644737 1 TATACCG 110 3.6379788E-12 23.545454 5 CGTTTAT 125 1.8189894E-11 20.72 27 ACGTTTA 130 3.274181E-11 19.923077 26 CGATCTG 270 0.0 19.185186 33 CGCCGGA 120 5.180482E-9 18.5 14 ACACCGC 50 0.0070366287 18.499998 6 CGGTAAG 50 0.0070366287 18.499998 1 GTATCAA 11960 0.0 18.32985 2 CCGCCGG 115 6.411756E-8 17.695652 13 GTAATAC 95 3.6090387E-6 17.526316 3 ACGATCT 285 0.0 17.526316 32 TTCCCGC 65 0.0015804768 17.076923 35 GTATTGG 380 0.0 17.039474 1 TTTTTAC 1680 0.0 16.958332 1 GTTATCA 275 0.0 16.818182 1 ATTGGAC 380 0.0 16.552631 3 TTGGACC 905 0.0 16.35359 4 CGACGAC 125 1.6593731E-7 16.279999 25 GGACCCT 855 0.0 16.22807 6 >>END_MODULE