##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1193749 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.563488639571634 31.0 31.0 33.0 28.0 34.0 2 30.940659217306152 31.0 31.0 34.0 28.0 34.0 3 31.1240972767307 31.0 31.0 34.0 28.0 34.0 4 35.16484453599542 35.0 35.0 37.0 33.0 37.0 5 35.025400649550285 35.0 35.0 37.0 32.0 37.0 6 35.06028151646619 37.0 35.0 37.0 32.0 37.0 7 34.8610302500777 36.0 35.0 37.0 32.0 37.0 8 34.992552873342724 37.0 35.0 37.0 32.0 37.0 9 36.44906006203984 38.0 35.0 39.0 32.0 39.0 10 36.33365891824831 38.0 35.0 39.0 32.0 39.0 11 36.38329246767955 38.0 35.0 39.0 32.0 39.0 12 36.20804122139579 38.0 35.0 39.0 32.0 39.0 13 36.27646515305982 38.0 35.0 39.0 32.0 39.0 14 37.12753937385497 39.0 36.0 41.0 31.0 41.0 15 37.20475242282925 39.0 36.0 41.0 32.0 41.0 16 37.170415221290234 39.0 36.0 41.0 32.0 41.0 17 37.30575355455795 39.0 36.0 41.0 32.0 41.0 18 37.339294943911995 39.0 36.0 41.0 32.0 41.0 19 37.465966463636825 39.0 36.0 41.0 32.0 41.0 20 37.44173691454401 39.0 36.0 41.0 32.0 41.0 21 37.32201828022474 39.0 36.0 41.0 31.0 41.0 22 37.26787708303839 39.0 36.0 41.0 31.0 41.0 23 37.14141750066388 39.0 36.0 40.0 31.0 41.0 24 37.05003731940299 39.0 36.0 40.0 31.0 41.0 25 36.95782949346973 39.0 35.0 40.0 31.0 41.0 26 36.66913312597539 38.0 35.0 40.0 30.0 41.0 27 36.52322808228531 38.0 35.0 40.0 30.0 41.0 28 36.35937956806666 38.0 35.0 40.0 30.0 41.0 29 36.20085043003177 38.0 35.0 40.0 30.0 41.0 30 35.99958533996678 38.0 35.0 40.0 30.0 41.0 31 35.69795744331513 38.0 34.0 40.0 29.0 41.0 32 35.347680291250505 37.0 34.0 40.0 27.0 41.0 33 35.424788628095186 38.0 34.0 40.0 27.0 41.0 34 35.366648265255094 38.0 34.0 40.0 27.0 41.0 35 35.23642407239713 38.0 34.0 40.0 27.0 41.0 36 35.097335369495596 38.0 34.0 40.0 26.0 41.0 37 34.93246486489203 38.0 33.0 40.0 25.0 41.0 38 34.76967687512199 38.0 33.0 40.0 24.0 41.0 39 34.64671970405839 38.0 33.0 40.0 24.0 41.0 40 34.41567951051687 38.0 33.0 40.0 23.0 41.0 41 34.233109305222456 38.0 33.0 40.0 21.0 41.0 42 33.96927913656891 38.0 33.0 40.0 19.0 41.0 43 33.59585892846821 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 3.0 16 15.0 17 38.0 18 95.0 19 233.0 20 511.0 21 1013.0 22 1712.0 23 2951.0 24 4979.0 25 7913.0 26 11787.0 27 17188.0 28 24102.0 29 32557.0 30 40801.0 31 49387.0 32 60201.0 33 73298.0 34 87607.0 35 104453.0 36 129440.0 37 167195.0 38 190416.0 39 185852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.87839989813604 24.186240156012694 14.853960087086984 21.08139985876428 2 17.20085210542585 23.533422855223336 36.79399940858589 22.471725630764926 3 19.923618784183276 26.059749578847814 33.09849893067973 20.918132706289178 4 12.823214930441825 15.715782798561506 34.64178818160267 36.819214089394 5 10.61579946873254 41.44933315127384 34.232573179118894 13.702294200874723 6 31.230937156805993 35.71261630376235 15.320222257777807 17.736224281653847 7 23.554030202328967 36.76266953940904 21.034321285295317 18.648978972966678 8 28.179206851691603 33.393200748230996 20.128268170277 18.2993242298004 9 24.998554972611494 13.676493132140843 24.902722431599944 36.42222946364772 10 16.489396012059487 28.593112957581535 33.107294749566286 21.810196280792695 11 30.577114619572455 22.081358811609476 25.704566035238564 21.636960533579504 12 20.25266618024392 28.36450543623492 31.79579626872986 19.5870321147913 13 31.39219383639274 21.435829475040396 29.687312827068336 17.48466386149852 14 20.636834041326946 23.311600679874918 29.70758509535924 26.343980183438898 15 22.48186176491038 29.423689569582884 28.200986974648774 19.89346169085796 16 21.008603986265122 28.62796115431301 28.266829961742378 22.096604897679494 17 18.23750218848351 27.731374015810694 28.81602413907781 25.215099656627988 18 19.390173311139947 26.66289144535409 34.35981935901098 19.58711588449498 19 18.63557582037765 25.087015779699083 36.040742233082504 20.23666616684077 20 23.82066916914695 23.535684637222733 34.48455244779262 18.159093745837694 21 23.13568430214392 24.754366286380137 32.836886146082634 19.27306326539331 22 20.84324259119798 24.509088594000914 33.75131623146909 20.896352583332007 23 19.667115951510745 26.91704872632354 35.06415502756442 18.351680294601294 24 18.017271637505036 25.945571472730027 33.35374521779704 22.683411671967892 25 19.537859298730304 27.064399635099175 34.76978828882788 18.627952777342642 26 21.22933715546568 25.593906256675396 33.11357747734239 20.063179110516533 27 19.53936715339657 27.271980960821747 32.62980743858215 20.558844447199537 28 19.17044537838356 26.871645546928207 32.701179226118725 21.256729848569506 29 18.053041300977007 26.789132388802 33.74654135835925 21.411284951861738 30 17.39042294485692 26.866870673818365 36.458920593860185 19.283785787464534 31 19.141544830613473 26.2704303836066 34.70218613795698 19.88583864782295 32 20.537148093946048 26.5248389736871 32.551650305047374 20.38636262731948 33 21.544897629233617 26.54351961760806 31.679272610908992 20.232310142249336 34 19.32642456663838 29.68597251180943 31.89271781588927 19.094885105662915 35 17.755240004389535 30.571418279722117 32.061765077918395 19.611576637969957 36 18.88847655579188 26.282241911825686 34.686688742775914 20.142592789606525 37 18.987492345543323 26.568650528712485 33.64249938638692 20.801357739357268 38 19.500498010888386 26.162870084079653 34.16053123395287 20.176100671079098 39 20.704184883086814 25.412377308797744 34.00078240903238 19.882655399083056 40 18.606507733200196 26.41216872223558 33.0598810972826 21.92144244728163 41 19.484497997485235 25.809529473951393 32.94436267590591 21.761609852657468 42 16.788035005683774 27.59776133843882 33.51391289123593 22.10029076464148 43 17.344684686646858 27.409279505155602 33.038771131954874 22.207264676242662 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 161.0 2 215.0 3 631.0 4 1047.0 5 1047.0 6 1921.0 7 2795.0 8 3195.0 9 3595.0 10 5283.0 11 6971.0 12 6971.0 13 12454.5 14 17938.0 15 30360.5 16 42783.0 17 41071.0 18 39359.0 19 39359.0 20 40974.5 21 42590.0 22 33775.5 23 24961.0 24 26825.0 25 28689.0 26 28689.0 27 29995.0 28 31301.0 29 31628.0 30 31955.0 31 34115.5 32 36276.0 33 36276.0 34 38962.0 35 41648.0 36 44766.5 37 47885.0 38 49578.0 39 51271.0 40 51271.0 41 54064.0 42 56857.0 43 66803.0 44 76749.0 45 101481.5 46 126214.0 47 126214.0 48 128032.5 49 129851.0 50 115319.5 51 100788.0 52 91300.5 53 81813.0 54 81813.0 55 69733.5 56 57654.0 57 45478.0 58 33302.0 59 28787.0 60 24272.0 61 24272.0 62 20943.5 63 17615.0 64 15270.0 65 12925.0 66 10866.5 67 8808.0 68 8808.0 69 7424.5 70 6041.0 71 5064.5 72 4088.0 73 3207.0 74 2326.0 75 2326.0 76 1882.5 77 1439.0 78 1093.0 79 747.0 80 591.5 81 436.0 82 436.0 83 330.0 84 224.0 85 175.0 86 126.0 87 93.5 88 61.0 89 61.0 90 39.0 91 17.0 92 12.0 93 7.0 94 4.5 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1193749.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.92238154966757 #Duplication Level Percentage of deduplicated Percentage of total 1 75.21605590497494 32.28452250214461 2 13.216142110314083 11.345365885470597 3 4.731088409529997 6.092087455771695 4 2.24076331413823 3.847155917277549 5 1.1925482126100637 2.559350469901162 6 0.7265175349311932 1.871031770210437 7 0.4546785069037199 1.3661119049028239 8 0.3316439971135642 1.1387960146212204 9 0.23910742438198124 0.9236754090613518 >10 1.4418523155392333 11.574486004068014 >50 0.11320384632019088 3.290802745790488 >100 0.07565695957719329 6.606165015496989 >500 0.01027196295823291 3.10900295242046 >1k 0.009284274212248977 7.631335516870391 >5k 5.926132475903602E-4 1.625129802253817 >10k+ 5.926132475903602E-4 4.734980633738426 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20138 1.6869542927365804 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19156 1.604692443721419 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16551 1.386472365631301 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7815 0.6546602342703534 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6299 0.5276653634893097 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5053 0.4232883127022515 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4819 0.4036862020407975 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4535 0.3798956061952722 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4106 0.34395840331593996 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4104 0.3437908639085771 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3885 0.3254452988023445 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3597 0.30131962414209357 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3176 0.2660525788922127 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3100 0.2596860814124242 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2990 0.2504714140074672 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2855 0.23916250401047456 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2450 0.20523577401949655 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2350 0.19685880365135386 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2219 0.1858849724690869 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2171 0.1818640266923784 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2171 0.1818640266923784 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1867 0.15639803677322453 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1642 0.1375498534449034 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1622 0.13587445937127487 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1618 0.13553938055654915 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1575 0.1319372832982478 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1520 0.1273299495957693 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1507 0.12624094344791073 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1494 0.1251519373000522 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1491 0.12490062818900789 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1464 0.12263884618960938 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 1411 0.11819905189449373 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 1355 0.11350794848833382 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1290 0.10806291774904105 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1273 0.10663883278645679 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 1272 0.10655506308277535 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1209 0.10127757175084544 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 1203 0.10077495352875689 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1199 0.10043987471403118 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 1196 0.1001885656029869 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 8.376970368142716E-5 0.0 11 0.0 0.0 0.0 3.3507881472570866E-4 0.0 12 0.0 0.0 0.0 5.02618222088563E-4 0.0 13 0.0 0.0 0.0 7.539273331328445E-4 0.0 14 0.0 0.0 0.0 0.001005236444177126 0.0 15 0.0 0.0 0.0 0.0015916243699471162 0.0 16 0.0 0.0 0.0 0.0022617819993985336 0.0 17 0.0 0.0 0.0 0.0036858669619827954 0.0 18 0.0 0.0 0.0 0.004523563998797067 0.0 19 0.0 0.0 0.0 0.005528800442974193 0.0 20 0.0 0.0 0.0 0.007287964220284163 0.0 21 0.0 0.0 0.0 0.01038744325649697 0.0 22 0.0 0.0 0.0 0.018680643920958258 0.0 23 0.0 0.0 0.0 0.030324632732676635 0.0 24 0.0 0.0 0.0 0.048753967542590614 0.0 25 0.0 0.0 0.0 0.05604193176287477 0.0 26 0.0 0.0 0.0 0.06843984790772599 0.0 27 0.0 0.0 0.0 0.1686284135107129 0.0 28 0.0 0.0 0.0 0.2766075615560725 0.0 29 0.0 0.0 0.0 0.40067049270826616 0.0 30 0.0 0.0 0.0 0.6401680755334664 0.0 31 0.0 0.0 0.0 0.9930898371433191 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 35 2.3883851E-5 31.714285 4 GGTATCA 4525 0.0 29.845303 1 ATTGGAC 280 0.0 26.42857 3 GTATTGG 310 0.0 22.080645 1 ACGCATT 60 3.7264417E-5 21.583332 17 TATTGGA 320 0.0 20.8125 2 CGTTTAT 55 5.143253E-4 20.181818 27 TTGGACC 640 0.0 19.078125 4 TTTTTAC 915 0.0 19.005463 1 GGACCCT 625 0.0 18.648 6 ACGTTTA 60 9.2371006E-4 18.5 26 ATCACGT 80 1.6167562E-5 18.5 23 CGTTAGA 70 1.21924735E-4 18.5 2 CTAGGAC 60 9.2371006E-4 18.5 3 TGCGTTC 130 6.9667294E-10 18.5 32 TCACGTT 70 1.21924735E-4 18.5 24 TGGACCC 655 0.0 18.076336 5 GTATCAA 7810 0.0 17.552496 2 CGTCTGT 485 0.0 17.546392 34 GACCCTC 650 0.0 17.076923 7 >>END_MODULE