##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088183_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1501221 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.65061839662515 31.0 31.0 33.0 28.0 34.0 2 31.037879166358586 31.0 31.0 34.0 28.0 34.0 3 31.231746691526432 31.0 31.0 34.0 28.0 34.0 4 35.25622543249795 37.0 35.0 37.0 33.0 37.0 5 35.110620621480784 37.0 35.0 37.0 32.0 37.0 6 35.146172349041215 37.0 35.0 37.0 32.0 37.0 7 34.9773730849755 37.0 35.0 37.0 32.0 37.0 8 35.08350202934811 37.0 35.0 37.0 32.0 37.0 9 36.59525279755612 39.0 35.0 39.0 32.0 39.0 10 36.45519080801561 38.0 35.0 39.0 32.0 39.0 11 36.491180845458466 38.0 35.0 39.0 32.0 39.0 12 36.330308462245064 38.0 35.0 39.0 32.0 39.0 13 36.395488072708815 38.0 35.0 39.0 32.0 39.0 14 37.318885094199985 39.0 36.0 41.0 32.0 41.0 15 37.39736654363348 39.0 36.0 41.0 32.0 41.0 16 37.358320327253615 39.0 36.0 41.0 32.0 41.0 17 37.45212996620751 39.0 36.0 41.0 32.0 41.0 18 37.45107549121682 39.0 36.0 41.0 32.0 41.0 19 37.55158500980202 39.0 36.0 41.0 32.0 41.0 20 37.516871932913276 39.0 36.0 41.0 32.0 41.0 21 37.40757756519526 39.0 36.0 41.0 32.0 41.0 22 37.35224260785054 39.0 36.0 41.0 32.0 41.0 23 37.23448446298047 39.0 36.0 41.0 31.0 41.0 24 37.162017451128115 39.0 36.0 40.0 31.0 41.0 25 37.06037085812149 39.0 36.0 40.0 31.0 41.0 26 36.8080475826011 39.0 35.0 40.0 31.0 41.0 27 36.671246272201095 38.0 35.0 40.0 30.0 41.0 28 36.52278378733045 38.0 35.0 40.0 30.0 41.0 29 36.38783097225525 38.0 35.0 40.0 30.0 41.0 30 36.22273003108803 38.0 35.0 40.0 30.0 41.0 31 35.96002853677107 38.0 35.0 40.0 30.0 41.0 32 35.65028067153337 38.0 34.0 40.0 29.0 41.0 33 35.791858094178004 38.0 34.0 40.0 29.0 41.0 34 35.77433702299661 38.0 34.0 40.0 29.0 41.0 35 35.66998130188693 38.0 34.0 40.0 28.0 41.0 36 35.56684125788275 38.0 34.0 40.0 27.0 41.0 37 35.42721091698024 38.0 34.0 40.0 27.0 41.0 38 35.288282671238946 38.0 34.0 40.0 26.0 41.0 39 35.22991018644157 38.0 34.0 40.0 25.0 41.0 40 35.052775707240976 38.0 34.0 40.0 25.0 41.0 41 34.907824364300794 38.0 34.0 40.0 24.0 41.0 42 34.69913490418799 38.0 33.0 40.0 23.0 41.0 43 34.356028193050854 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 5.0 16 14.0 17 36.0 18 82.0 19 225.0 20 496.0 21 933.0 22 1798.0 23 3095.0 24 5199.0 25 8604.0 26 12832.0 27 18699.0 28 26336.0 29 36524.0 30 46466.0 31 57836.0 32 70995.0 33 87507.0 34 106697.0 35 129563.0 36 161600.0 37 209882.0 38 255998.0 39 259799.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.37147095597517 23.663537880165546 13.83720318327548 22.127787980583804 2 17.2798675211711 23.156017668284683 36.74961914335065 22.814495667193572 3 19.704893549983645 26.099754799593132 32.50853805002728 21.686813600395944 4 12.849940148718945 15.736657027845999 35.66057229415256 35.7528305292825 5 11.077316397785536 40.67549015101707 34.85229689699251 13.394896554204877 6 31.230445084367993 36.327962371962556 15.613757068412978 16.827835475256474 7 24.339321125936824 35.628331871190184 21.548526166367242 18.483820836505753 8 27.725564723648283 33.82153593641443 20.289417747287043 18.16348159265025 9 25.279688999820817 13.589071828864638 23.979214252931445 37.152024918383106 10 16.224060281597446 27.846133247536503 33.83552454968323 22.094281921182823 11 31.258355698461454 21.84128785834997 25.427568625805264 21.472787817383317 12 20.131479642237885 27.543046626712524 31.882114625361623 20.443359105687968 13 30.93501889461978 21.01309534039292 29.05228477352768 18.99960099145962 14 20.752174396707744 22.515405793017816 29.030569116738974 27.701850693535462 15 22.976230681558548 28.90027517600673 27.27706313727293 20.846431005161797 16 21.547593592149326 28.407409701836038 27.63363955073903 22.411357155275606 17 19.246067034767034 27.18960099812086 28.40574439073261 25.158587576379492 18 20.22680204979813 26.501960737293178 32.88802914427656 20.383208068632133 19 19.533566343662926 25.054538938637283 34.25058668910174 21.161308028598054 20 24.02710860026605 23.791367160464716 32.947314219558606 19.234210019710623 21 23.271656871306757 24.968608885700373 31.526604011001712 20.233130231991158 22 21.71179326694737 24.35797261029522 32.523858912178824 21.40637521057859 23 20.58491054947939 26.402308520864015 33.57220555800912 19.44057537164748 24 19.239938689906417 25.506171309887087 32.18886493061315 23.06502506959335 25 20.496848898330093 26.52121173364881 33.27937725358225 19.702562114438845 26 21.919624092655248 25.496645730375473 31.696265906219008 20.887464270750275 27 20.503110468078983 26.90696439764698 31.40556920000453 21.184355934269504 28 20.223737877367824 26.476714620965204 31.529268508767196 21.77027899289978 29 19.185050035937415 26.39571388889444 32.65395301557865 21.765283059589493 30 18.69804645685079 26.694137638628824 34.4983849812919 20.10943092322849 31 20.112828157879488 26.025615149268493 33.23867705021446 20.62287964263756 32 21.321444344303735 26.30372210354105 31.299921863603025 21.074911688552188 33 22.235833364974244 26.047064356280654 30.748570663479928 20.968531615265174 34 20.421376999122714 28.7818382503309 30.78394187131675 20.012842879229638 35 19.112375859383796 29.515108035392522 31.122732762198236 20.24978334302544 36 20.03535788534799 25.968061997534008 33.20477131614866 20.791808800969346 37 20.11456008142705 26.227184405227476 32.33427989616452 21.32397561718095 38 20.411651582278694 25.8891262512315 32.804563751772726 20.89465841471709 39 21.322510143409932 25.492848821059656 32.62690836325897 20.557732672271438 40 19.696566994466504 26.132861184329286 31.8747206440624 22.295851177141806 41 20.63453682036156 25.67763174109608 31.65723101395464 22.030600424587718 42 18.134971466559556 27.43160400767109 32.117256553165724 22.316167972603633 43 18.848590580600725 27.124920314863697 31.695000269780397 22.331488834755177 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 133.0 2 197.0 3 641.5 4 1086.0 5 1086.0 6 1926.0 7 2766.0 8 3023.5 9 3281.0 10 5083.0 11 6885.0 12 6885.0 13 12236.5 14 17588.0 15 29160.0 16 40732.0 17 40058.5 18 39385.0 19 39385.0 20 41771.0 21 44157.0 22 36419.5 23 28682.0 24 30993.5 25 33305.0 26 33305.0 27 36135.5 28 38966.0 29 40520.0 30 42074.0 31 45319.0 32 48564.0 33 48564.0 34 51980.0 35 55396.0 36 60171.5 37 64947.0 38 67708.5 39 70470.0 40 70470.0 41 74194.5 42 77919.0 43 88521.5 44 99124.0 45 125743.5 46 152363.0 47 152363.0 48 153081.5 49 153800.0 50 137985.0 51 122170.0 52 113281.0 53 104392.0 54 104392.0 55 90448.5 56 76505.0 57 63082.5 58 49660.0 59 42978.5 60 36297.0 61 36297.0 62 31679.5 63 27062.0 64 23839.0 65 20616.0 66 17607.0 67 14598.0 68 14598.0 69 12488.5 70 10379.0 71 8811.5 72 7244.0 73 5988.0 74 4732.0 75 4732.0 76 3657.0 77 2582.0 78 2017.5 79 1453.0 80 1173.5 81 894.0 82 894.0 83 660.5 84 427.0 85 318.5 86 210.0 87 180.0 88 150.0 89 150.0 90 112.0 91 74.0 92 43.0 93 12.0 94 10.0 95 8.0 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1501221.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.86154701153774 #Duplication Level Percentage of deduplicated Percentage of total 1 76.50825453169847 35.08786911976184 2 12.908299539062204 11.839891722994246 3 4.4321788206995585 6.097997320471641 4 1.9200963525472028 3.522343565561027 5 1.058556651104521 2.427352280950297 6 0.6442136504923718 1.7726780770518151 7 0.42603666153495895 1.3677090267136875 8 0.30670881701945774 1.1252912664472787 9 0.2178843866327852 0.8993263536575589 >10 1.3611591774162666 11.705306403591024 >50 0.12601421705623841 3.956405337118908 >100 0.07576689190580557 6.629562673625329 >500 0.0076354034373185 2.5319413429672193 >1k 0.006167056622449556 5.569611016094385 >5k 5.873387259475769E-4 1.7961773302738009 >10k+ 4.405040444606826E-4 3.670537162720131 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19276 1.2840214731874922 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18760 1.2496494520127284 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16471 1.097173567382817 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9546 0.6358823917331292 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6449 0.4295836522404096 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5506 0.3667681174190875 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5172 0.3445195610772831 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4771 0.31780797097829033 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4661 0.31048060212320505 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4237 0.28223692580905807 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4041 0.26918088675817886 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3888 0.25898918280519656 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3781 0.2518616512825227 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3186 0.21222724702092496 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3076 0.20489987816583966 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2853 0.19004530312325768 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2573 0.17139381876485874 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2462 0.16399983746563632 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2174 0.14481545355414024 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2114 0.14081870690591192 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1969 0.13115990250602674 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1866 0.12429882075990144 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1732 0.1153727532455248 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1715 0.11424034169519345 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1685 0.11224196837107928 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1621 0.10797877194630237 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1570 0.10458153729530828 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1542 0.10271638885946839 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.661244413713903E-5 0.0 3 0.0 0.0 0.0 1.3322488827427806E-4 0.0 4 0.0 6.661244413713903E-5 0.0 1.3322488827427806E-4 0.0 5 0.0 6.661244413713903E-5 0.0 1.3322488827427806E-4 0.0 6 0.0 6.661244413713903E-5 0.0 1.3322488827427806E-4 0.0 7 0.0 6.661244413713903E-5 0.0 2.664497765485561E-4 0.0 8 6.661244413713903E-5 6.661244413713903E-5 0.0 3.3306222068569516E-4 0.0 9 6.661244413713903E-5 6.661244413713903E-5 0.0 5.328995530971123E-4 0.0 10 6.661244413713903E-5 6.661244413713903E-5 0.0 9.325742179199464E-4 0.0 11 6.661244413713903E-5 6.661244413713903E-5 0.0 0.0011324115503313636 0.0 12 6.661244413713903E-5 6.661244413713903E-5 0.0 0.0015320862151541978 0.0 13 6.661244413713903E-5 6.661244413713903E-5 0.0 0.0018651484358398929 0.0 14 6.661244413713903E-5 6.661244413713903E-5 0.0 0.002398047988937005 0.0 15 6.661244413713903E-5 6.661244413713903E-5 0.0 0.0032640097627198127 0.0 16 6.661244413713903E-5 6.661244413713903E-5 0.0 0.004329808868914037 0.0 17 6.661244413713903E-5 6.661244413713903E-5 0.0 0.005861895084068235 0.0 18 6.661244413713903E-5 6.661244413713903E-5 0.0 0.006661244413713904 0.0 19 6.661244413713903E-5 6.661244413713903E-5 0.0 0.007527206187496711 0.0 20 6.661244413713903E-5 6.661244413713903E-5 0.0 0.010258316397119412 0.0 21 6.661244413713903E-5 6.661244413713903E-5 0.0 0.013855388380524919 0.0 22 6.661244413713903E-5 6.661244413713903E-5 0.0 0.02271484345076441 0.0 23 6.661244413713903E-5 6.661244413713903E-5 0.0 0.040300528702969116 0.0 24 6.661244413713903E-5 6.661244413713903E-5 0.0 0.06321520948614494 0.0 25 6.661244413713903E-5 6.661244413713903E-5 0.0 0.07127531522673877 0.0 26 6.661244413713903E-5 6.661244413713903E-5 0.0 0.0832655551714238 0.0 27 6.661244413713903E-5 6.661244413713903E-5 0.0 0.16546531123665337 0.0 28 6.661244413713903E-5 6.661244413713903E-5 0.0 0.2511955268411513 0.0 29 6.661244413713903E-5 6.661244413713903E-5 0.0 0.35231321704132834 0.0 30 6.661244413713903E-5 6.661244413713903E-5 0.0 0.5511513627906883 0.0 31 6.661244413713903E-5 6.661244413713903E-5 0.0 0.8313899152756323 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4720 0.0 28.925848 1 GTATTGG 470 0.0 23.61702 1 ATTGGAC 460 0.0 23.326088 3 TGCGACG 55 5.144101E-4 20.181818 22 TATTGGA 575 0.0 18.982607 2 TACGTTA 90 2.1531087E-6 18.5 19 TTGGACC 855 0.0 17.959064 4 GTATCAA 7810 0.0 17.694624 2 AGGTCGT 105 4.7996764E-7 17.619047 22 GGACCCT 820 0.0 17.146341 6 CTAGTAC 155 4.0199666E-10 16.709677 3 GGTCGTC 115 1.242739E-6 16.086956 23 TGGACCC 900 0.0 16.033333 5 CTTAACG 105 9.346832E-6 15.857142 30 TAGACTC 70 0.0025929895 15.857142 5 GAACCGC 70 0.0025929895 15.857142 6 TACACGG 70 0.0025929895 15.857142 15 GACCCTC 815 0.0 15.662577 7 CATTGCG 95 7.061973E-5 15.578948 29 AGACGCG 95 7.061973E-5 15.578948 14 >>END_MODULE