##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088182_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1605119 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.62006492976533 31.0 31.0 33.0 28.0 34.0 2 31.009186234790068 31.0 31.0 34.0 28.0 34.0 3 31.209252398108802 31.0 31.0 34.0 28.0 34.0 4 35.23000101550103 37.0 35.0 37.0 33.0 37.0 5 35.07497824148864 35.0 35.0 37.0 32.0 37.0 6 35.109265418950244 37.0 35.0 37.0 32.0 37.0 7 34.9299217067395 36.0 35.0 37.0 32.0 37.0 8 35.03037718698738 37.0 35.0 37.0 32.0 37.0 9 36.53850898282308 38.0 35.0 39.0 32.0 39.0 10 36.400287455322626 38.0 35.0 39.0 32.0 39.0 11 36.434750320692736 38.0 35.0 39.0 32.0 39.0 12 36.26676838290494 38.0 35.0 39.0 32.0 39.0 13 36.332843857682825 38.0 35.0 39.0 32.0 39.0 14 37.25539539436017 39.0 36.0 41.0 32.0 41.0 15 37.33373101932006 39.0 36.0 41.0 32.0 41.0 16 37.30696353354487 39.0 36.0 41.0 32.0 41.0 17 37.37231881249926 39.0 36.0 41.0 32.0 41.0 18 37.3697663537719 39.0 36.0 41.0 32.0 41.0 19 37.46772482289475 39.0 36.0 41.0 32.0 41.0 20 37.432969144343815 39.0 36.0 41.0 32.0 41.0 21 37.30547392436324 39.0 36.0 41.0 31.0 41.0 22 37.25461975093435 39.0 36.0 40.0 31.0 41.0 23 37.13996470043654 39.0 36.0 40.0 31.0 41.0 24 37.05924794361041 39.0 36.0 40.0 31.0 41.0 25 36.967083437427384 39.0 36.0 40.0 31.0 41.0 26 36.723817361828004 39.0 35.0 40.0 30.0 41.0 27 36.585501760305625 38.0 35.0 40.0 30.0 41.0 28 36.43981225068048 38.0 35.0 40.0 30.0 41.0 29 36.32058806854819 38.0 35.0 40.0 30.0 41.0 30 36.15017951940012 38.0 35.0 40.0 30.0 41.0 31 35.906722803729814 38.0 34.0 40.0 29.0 41.0 32 35.60356584153573 38.0 34.0 40.0 28.0 41.0 33 35.77581537568243 38.0 34.0 40.0 29.0 41.0 34 35.761962197195345 38.0 34.0 40.0 29.0 41.0 35 35.68530993652184 38.0 34.0 40.0 28.0 41.0 36 35.601594025115894 38.0 34.0 40.0 27.0 41.0 37 35.47761131729174 38.0 34.0 40.0 27.0 41.0 38 35.35741960564918 38.0 34.0 40.0 27.0 41.0 39 35.31444086077107 38.0 34.0 40.0 26.0 41.0 40 35.15970965392597 38.0 34.0 40.0 25.0 41.0 41 35.04415124361496 38.0 34.0 40.0 25.0 41.0 42 34.84733966765081 38.0 33.0 40.0 24.0 41.0 43 34.52209275449359 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 4.0 16 14.0 17 42.0 18 95.0 19 241.0 20 542.0 21 1029.0 22 1904.0 23 3429.0 24 5592.0 25 8936.0 26 13742.0 27 20102.0 28 28683.0 29 39005.0 30 50193.0 31 62827.0 32 77253.0 33 94848.0 34 115341.0 35 139915.0 36 173182.0 37 223522.0 38 274444.0 39 270231.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.24879152262231 23.38804786436395 13.544665535701714 22.818495077312026 2 17.467614550696865 22.80640874601821 36.569687356513754 23.156289346771175 3 19.82687887938527 26.037072640720094 31.885984777452634 22.250063702442 4 13.106754078669555 15.674476471837915 35.68613915852968 35.53263029096285 5 11.523631581209868 39.9973459911695 34.90644618872495 13.572576238895683 6 31.877823388795473 36.08424048310437 15.612051193712118 16.42588493438804 7 25.013161017968137 34.71649142524635 21.697145196088265 18.573202360697245 8 27.49416086906952 33.84110461591944 20.316562198815166 18.34817231619587 9 25.432070768584758 13.74153567430203 23.494145916907094 37.33224764020612 10 16.214249535392703 27.46730927738068 34.138528046830174 22.179913140396444 11 31.657465895052017 21.72636421349445 25.17532967960631 21.44084021184722 12 20.236069724425416 26.931648058492858 31.975697752004677 20.856584465077045 13 30.834847758951206 20.901129448969204 28.655383183427524 19.60863960865207 14 21.079371685214614 22.35965059288439 28.208562729616933 28.352414992284057 15 23.09585769030209 28.724723836675036 26.73322040297324 21.446198070049636 16 22.11306451421982 28.328803035787374 26.95463700822182 22.603495441770985 17 19.661096778494304 27.000739509033288 27.892012990937122 25.44615072153529 18 20.861381617188506 26.552486139656935 31.818014739094107 20.768117504060445 19 20.131840692185442 25.03266112979785 33.08602041343975 21.74947776457696 20 24.36903432081983 24.005696773884054 31.816332620821257 19.80893628447486 21 23.669896126081618 25.004438923220025 30.542408382182256 20.783256568516105 22 22.099669868713782 24.518618245750005 31.450876850875233 21.93083503466098 23 21.102298334266806 26.36190836941062 32.527494846176516 20.008298450146064 24 20.02779856197578 25.584645126000005 30.933158226897817 23.4543980851264 25 21.043050390656393 26.441466333648783 32.09593805817513 20.419545217519698 26 22.445563226153325 25.56065936544269 30.67199378986854 21.32178361853545 27 21.03488900199923 26.9153875818553 30.23545294772537 21.814270468420098 28 20.881193232402083 26.33001042290322 30.51755041215013 22.271245932544563 29 20.04250152169403 26.366020214077583 31.376489842809164 22.21498842141922 30 19.42883985548735 26.480964962722393 33.28606788655545 20.80412729523481 31 20.803940393204492 25.931286091560814 32.18733315100002 21.077440364234675 32 21.80093812359084 26.092894047108032 30.245732559392792 21.860435269908336 33 22.67501661870553 25.94735966616805 29.833239778483712 21.544383936642703 34 20.952963612043717 28.56847373933023 29.908312093994276 20.570250554631777 35 19.68732536341542 29.428783784878256 30.070356154278905 20.813534697427418 36 20.5980366564722 26.022868086416022 32.113008443610724 21.266086813501055 37 20.640151913970243 26.232945968492054 31.315435179572354 21.811466937965346 38 20.880134120896958 25.962934835361118 31.86623546291583 21.290695580826092 39 21.81620178940004 25.355939341569066 31.794091279213564 21.03376758981733 40 20.29569147209646 26.083548945592195 30.996642616528742 22.624116965782598 41 21.119617922409493 25.652428262328215 30.843382951669003 22.384570863593293 42 18.806580695886097 27.285142098498618 31.239179151203118 22.669098054412164 43 19.435319125871665 27.008028688215642 30.90680504062316 22.649847145289538 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 92.0 1 152.0 2 212.0 3 637.0 4 1062.0 5 1062.0 6 1791.0 7 2520.0 8 2768.5 9 3017.0 10 4656.5 11 6296.0 12 6296.0 13 11455.5 14 16615.0 15 26499.5 16 36384.0 17 36306.0 18 36228.0 19 36228.0 20 38480.5 21 40733.0 22 33773.5 23 26814.0 24 29455.0 25 32096.0 26 32096.0 27 35434.0 28 38772.0 29 41066.0 30 43360.0 31 46877.0 32 50394.0 33 50394.0 34 55178.5 35 59963.0 36 65466.5 37 70970.0 38 74300.0 39 77630.0 40 77630.0 41 81517.5 42 85405.0 43 96117.0 44 106829.0 45 133223.0 46 159617.0 47 159617.0 48 161291.5 49 162966.0 50 148602.0 51 134238.0 52 125095.0 53 115952.0 54 115952.0 55 101869.0 56 87786.0 57 72364.0 58 56942.0 59 50339.5 60 43737.0 61 43737.0 62 38760.0 63 33783.0 64 29498.0 65 25213.0 66 21357.0 67 17501.0 68 17501.0 69 14757.5 70 12014.0 71 10119.0 72 8224.0 73 6644.5 74 5065.0 75 5065.0 76 3992.5 77 2920.0 78 2345.5 79 1771.0 80 1380.5 81 990.0 82 990.0 83 705.5 84 421.0 85 342.0 86 263.0 87 230.5 88 198.0 89 198.0 90 149.0 91 100.0 92 57.5 93 15.0 94 11.5 95 8.0 96 8.0 97 4.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1605119.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.24380201238885 #Duplication Level Percentage of deduplicated Percentage of total 1 78.87254520806617 39.62856545647266 2 12.089580258443524 12.148529538362427 3 3.8889828791464 5.861918574282051 4 1.6454265285522507 3.306899389060463 5 0.8740830327868231 2.1958627420864767 6 0.5017188873694199 1.5124958665719093 7 0.33519710019107196 1.1789103715988962 8 0.25136993151934267 1.0103824856900478 9 0.1822333336378073 0.8240485981820034 >10 1.1954704622112713 11.451150831447714 >50 0.09619705493492231 3.301452678398796 >100 0.05478435766350563 5.246432732679571 >500 0.006017437807276172 2.1808086662054254 >1k 0.005390621369018237 5.140203125755312 >5k 6.268164382579346E-4 1.9837214606901095 >10k+ 3.7608986295476073E-4 3.028617482516115 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17310 1.0784247149276782 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15946 0.9934465918103269 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14827 0.9237321345021772 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9818 0.611668044549968 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6029 0.37561078025990596 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5395 0.33611215118629834 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5161 0.32153379282159145 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5091 0.3171727454475338 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4966 0.3093851608510023 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4143 0.2581117038674391 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3999 0.24914040641223484 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3987 0.24839279829096786 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3777 0.23530965616879496 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3436 0.2140651253894571 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3135 0.19531262168100932 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2841 0.1769962227099673 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2773 0.1727597766894542 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2335 0.1454720802632079 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2135 0.13301194490875753 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2126 0.13245123881780727 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1957 0.12192242444329672 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1928 0.12011570481690144 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1897 0.11818438383696163 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1831 0.114072539169993 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1816 0.11313802901840922 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1711 0.1065964579573228 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 6.230067677225178E-5 0.0 0.0 0.0 3 0.0 6.230067677225178E-5 0.0 0.0 0.0 4 0.0 6.230067677225178E-5 0.0 0.0 0.0 5 0.0 6.230067677225178E-5 0.0 0.0 0.0 6 0.0 6.230067677225178E-5 0.0 0.0 0.0 7 0.0 6.230067677225178E-5 0.0 0.0 0.0 8 6.230067677225178E-5 6.230067677225178E-5 0.0 0.0 0.0 9 6.230067677225178E-5 6.230067677225178E-5 0.0 1.8690203031675534E-4 0.0 10 6.230067677225178E-5 6.230067677225178E-5 0.0 5.60706090950266E-4 0.0 11 6.230067677225178E-5 6.230067677225178E-5 0.0 8.099087980392731E-4 0.0 12 6.230067677225178E-5 6.230067677225178E-5 0.0 0.001121412181900532 0.0 13 6.230067677225178E-5 6.230067677225178E-5 0.0 0.0014329155657617908 0.0 14 6.230067677225178E-5 6.230067677225178E-5 0.0 0.0019313209799398051 0.0 15 6.230067677225178E-5 6.230067677225178E-5 0.0 0.002305125040573316 0.0 16 6.230067677225178E-5 6.230067677225178E-5 0.0 0.0032396351921570926 0.0 17 6.230067677225178E-5 6.230067677225178E-5 0.0 0.004547949404374379 0.0 18 6.230067677225178E-5 6.230067677225178E-5 0.0 0.0048594527882356384 0.0 19 6.230067677225178E-5 6.230067677225178E-5 0.0 0.006043165646908422 0.0 20 6.230067677225178E-5 6.230067677225178E-5 0.0 0.007600682566214717 0.0 21 6.230067677225178E-5 6.230067677225178E-5 0.0 0.010591115051282803 0.0 22 6.230067677225178E-5 6.230067677225178E-5 0.0 0.015948973253696454 0.0 23 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.02554327747662323 0.0 24 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.04012163584133015 0.0 25 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.046476304872099826 0.0 26 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.05719202127692713 0.0 27 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.1315167286662235 0.0 28 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.2092679732779937 0.0 29 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.29991545798162006 0.0 30 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.47124231910531245 0.0 31 6.230067677225178E-5 1.2460135354450355E-4 0.0 0.7191367119821023 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3960 0.0 29.431818 1 ATTGGAC 590 0.0 25.084745 3 GTATTGG 620 0.0 24.467741 1 TTGGACC 1005 0.0 21.721394 4 TATTGGA 740 0.0 20.75 2 TTGCGCG 55 5.1443145E-4 20.181818 18 TGGACCC 1075 0.0 19.618605 5 GACCCTC 1090 0.0 19.348623 7 GGACCCT 1090 0.0 19.1789 6 TAGGTCG 80 1.6173215E-5 18.5 21 TACGTAG 50 0.0070360666 18.5 14 ACGTTTA 115 6.409573E-8 17.695652 26 TGCGTTA 95 3.608191E-6 17.526316 37 CGTTTAG 120 1.0419353E-7 16.958334 26 GTATCAA 7080 0.0 16.723164 2 GTTATCA 155 4.0199666E-10 16.709677 1 CGTCTGT 510 0.0 16.686275 34 AGGTCGT 90 4.447724E-5 16.444445 22 CATTGCG 80 3.3836107E-4 16.1875 29 ACCCTCG 1240 0.0 16.112902 8 >>END_MODULE