##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088179_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1665541 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.54747436418557 31.0 31.0 33.0 28.0 34.0 2 30.952971436908488 31.0 31.0 34.0 28.0 34.0 3 31.1409674093883 31.0 31.0 34.0 28.0 34.0 4 35.18333682569207 35.0 35.0 37.0 33.0 37.0 5 35.06848105210259 35.0 35.0 37.0 32.0 37.0 6 35.1112371295573 37.0 35.0 37.0 32.0 37.0 7 34.90640338484612 36.0 35.0 37.0 32.0 37.0 8 35.03525881380284 37.0 35.0 37.0 32.0 37.0 9 36.493446874018716 38.0 35.0 39.0 32.0 39.0 10 36.39577830866968 38.0 35.0 39.0 32.0 39.0 11 36.444723366161504 38.0 35.0 39.0 32.0 39.0 12 36.25895189611063 38.0 35.0 39.0 32.0 39.0 13 36.30835566341507 38.0 35.0 39.0 32.0 39.0 14 37.16033829248274 39.0 36.0 41.0 31.0 41.0 15 37.23107807012857 39.0 36.0 41.0 32.0 41.0 16 37.1868882243067 39.0 36.0 41.0 32.0 41.0 17 37.35388081109981 39.0 36.0 41.0 32.0 41.0 18 37.376867936604384 39.0 36.0 41.0 32.0 41.0 19 37.4965035384899 39.0 36.0 41.0 32.0 41.0 20 37.46805092159244 39.0 36.0 41.0 32.0 41.0 21 37.35689724840157 39.0 36.0 41.0 31.0 41.0 22 37.31133907841356 39.0 36.0 41.0 31.0 41.0 23 37.17157608248611 39.0 36.0 41.0 31.0 41.0 24 37.0786609275905 39.0 36.0 40.0 31.0 41.0 25 36.99361348654882 39.0 35.0 40.0 31.0 41.0 26 36.714466350573176 38.0 35.0 40.0 30.0 41.0 27 36.58474753848749 38.0 35.0 40.0 30.0 41.0 28 36.42531045468109 38.0 35.0 40.0 30.0 41.0 29 36.2797511439226 38.0 35.0 40.0 30.0 41.0 30 36.079155661733935 38.0 35.0 40.0 30.0 41.0 31 35.76906902922234 38.0 34.0 40.0 29.0 41.0 32 35.45783742339576 38.0 34.0 40.0 28.0 41.0 33 35.54028811058989 38.0 34.0 40.0 29.0 41.0 34 35.469598767007234 38.0 34.0 40.0 28.0 41.0 35 35.331846529145785 38.0 34.0 40.0 27.0 41.0 36 35.218319452958525 38.0 34.0 40.0 26.0 41.0 37 35.055462459345044 38.0 34.0 40.0 25.0 41.0 38 34.89997664422551 38.0 33.0 40.0 25.0 41.0 39 34.798221118543466 38.0 33.0 40.0 24.0 41.0 40 34.574932109146516 38.0 33.0 40.0 23.0 41.0 41 34.397900742161255 38.0 33.0 40.0 22.0 41.0 42 34.12380241615187 38.0 33.0 40.0 21.0 41.0 43 33.75726505681938 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 4.0 15 6.0 16 13.0 17 55.0 18 129.0 19 286.0 20 622.0 21 1208.0 22 2237.0 23 3921.0 24 6494.0 25 10166.0 26 15704.0 27 23021.0 28 32042.0 29 43693.0 30 55732.0 31 67904.0 32 82150.0 33 101243.0 34 121853.0 35 146144.0 36 181090.0 37 236263.0 38 271933.0 39 261625.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.09580070379534 24.307177067391315 14.612969599667617 20.984052629145726 2 17.23157820792163 23.161002941386613 37.41781199021819 22.189606860473564 3 19.85913285833252 26.276687274585253 33.26780907825145 20.596370788830775 4 12.274630285294688 15.162941050385431 34.929491378477024 37.63293728584286 5 10.317188228929819 41.41699303709726 34.60407158995185 13.661747144021072 6 31.12003847398533 35.31327058295173 15.293649330757994 18.27304161230495 7 23.561293297493126 36.79008802545239 20.59474969394329 19.053868983111194 8 28.483657862520346 33.09195030323481 19.98906061153703 18.435331222707816 9 24.874380156357603 13.513386941540318 25.04639633608539 36.565836566016685 10 16.629131315290348 27.73086942921249 33.00405093600218 22.635948319494986 11 30.2226123523828 21.24901158242277 26.413219488442497 22.115156576751936 12 20.525402857089677 27.638647142279897 31.925362389758043 19.910587610872383 13 32.10140128642885 20.57877890727397 30.09664727556992 17.223172530727254 14 20.69123486002446 22.78857140112432 29.258180975430808 27.26201276342041 15 22.7120196981041 28.685033871877064 28.473511009335706 20.12943542068313 16 21.15426759233186 28.69854299593946 27.820870215743714 22.32631919598497 17 18.348692707054344 26.735697289949634 28.283362583088618 26.632247419907408 18 19.83937951692573 26.16885444429167 34.30741122554173 19.684354813240862 19 18.623978635170193 24.04089722198373 35.99869351760179 21.33643062524429 20 25.0603257440075 22.236378450005134 34.37807895452589 18.325216851461477 21 23.98584003636056 23.827152859040996 32.53927702770451 19.647730076893936 22 21.51529142783036 23.187660946203064 33.78193631979038 21.51511130617619 23 20.110462606444393 26.016591605970675 35.43413221289659 18.438813574688346 24 18.165448944216926 24.683871486802186 33.34718268718693 23.803496881793965 25 19.852288235474237 26.10467109485747 34.99283416019179 19.0502065094765 26 22.13887259455036 24.542475988282487 32.82272847080919 20.495922946357968 27 19.952676037395655 26.605589415090954 32.32006897458544 21.121665572927956 28 19.525547554818523 25.878678459431498 32.41175089655554 22.18402308919444 29 18.387298781597092 25.757276464524136 33.68827305962447 22.1671516942543 30 17.345715296110995 26.00080094095552 36.87684662220864 19.776637140724844 31 19.543980004094767 25.21354923115072 34.97242037271974 20.27005039203478 32 21.382962052570306 25.37800030140357 32.03265485508913 21.206382790937 33 22.67719617829882 25.350141485559348 31.195209244323618 20.777453091818213 34 19.777897992304002 29.649945573240167 31.310306981335195 19.26184945312064 35 17.93177111821324 30.817854378847475 31.52957507500566 19.720799427933628 36 19.344044967971367 25.490936578565165 34.78143137875321 20.38358707471026 37 19.42275813084157 26.191309610510938 33.37744312508668 21.008489133560808 38 20.067413531098904 25.40309725188392 34.151666035240204 20.37782318177697 39 21.478786772586204 24.819383011285822 33.84521906095377 19.856611155174207 40 18.922920540533074 26.03712547454551 32.5170620236908 22.522891961230616 41 20.454194763143025 25.46007573515152 32.20431079150858 21.88141871019687 42 17.03062248242463 27.729548537081943 32.945031073987366 22.29479790650605 43 17.96233175886994 27.671249161683804 32.29971522766476 22.066703851781494 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 161.0 2 213.0 3 695.0 4 1177.0 5 1177.0 6 2209.5 7 3242.0 8 3618.5 9 3995.0 10 6287.5 11 8580.0 12 8580.0 13 15455.0 14 22330.0 15 38676.5 16 55023.0 17 53741.0 18 52459.0 19 52459.0 20 55085.0 21 57711.0 22 45052.0 23 32393.0 24 34196.5 25 36000.0 26 36000.0 27 37734.5 28 39469.0 29 39639.0 30 39809.0 31 42104.0 32 44399.0 33 44399.0 34 47756.0 35 51113.0 36 55769.5 37 60426.0 38 62726.5 39 65027.0 40 65027.0 41 69773.5 42 74520.0 43 91686.5 44 108853.0 45 151319.0 46 193785.0 47 193785.0 48 196655.0 49 199525.0 50 176047.0 51 152569.0 52 140210.5 53 127852.0 54 127852.0 55 106595.0 56 85338.0 57 65667.0 58 45996.0 59 38668.5 60 31341.0 61 31341.0 62 27001.0 63 22661.0 64 19842.5 65 17024.0 66 14345.5 67 11667.0 68 11667.0 69 9891.0 70 8115.0 71 6747.0 72 5379.0 73 4286.5 74 3194.0 75 3194.0 76 2488.5 77 1783.0 78 1437.5 79 1092.0 80 868.5 81 645.0 82 645.0 83 471.0 84 297.0 85 247.5 86 198.0 87 157.5 88 117.0 89 117.0 90 101.0 91 85.0 92 52.5 93 20.0 94 14.5 95 9.0 96 9.0 97 5.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1665541.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.42834752925902 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24466196820984 28.16283357867777 2 13.04624470065632 9.765987612158373 3 4.59027782518678 5.154195410908263 4 2.1193599486212045 3.17296562786348 5 1.1768242880692694 2.2023294217364726 6 0.7026664401916605 1.5779786232384458 7 0.4841693831557983 1.2685161955047533 8 0.3294309192456704 0.9864043945928174 9 0.25741958509933516 0.8671310722742024 >10 1.7108837624992908 12.441655496584614 >50 0.20038397910062924 5.214308807991127 >100 0.11432272167519635 8.43452401255994 >500 0.009799081799562556 2.530239838846578 >1k 0.01110562603950423 7.720187010528503 >5k 0.0017964983299198019 4.796715637767976 >10k+ 6.532721199708371E-4 5.70402725876669 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 27515 1.6520157714520387 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26822 1.6104076693398723 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23391 1.4044085375262452 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15586 0.935792033939723 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8637 0.5185702423416776 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8521 0.5116055383806223 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8420 0.5055414426903931 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8414 0.5051811993820626 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8383 0.503319942289022 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6840 0.4106773714967089 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6687 0.40149116713428246 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6403 0.3844396505399747 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5957 0.3576615646207449 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5140 0.3086084341364157 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5069 0.3043455549878388 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4738 0.2844721324782758 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4551 0.2732445493686436 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3853 0.231336244499535 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3656 0.21950825587601866 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3328 0.19981495502062094 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3083 0.18510501993046102 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3081 0.18498493882768421 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2861 0.1717760175222345 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2839 0.17045512539168955 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2803 0.16829366554170685 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2297 0.13791314653917255 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2249 0.13503120007252897 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2237 0.1343107134558681 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2234 0.13413059180170286 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2182 0.13100848312950567 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2177 0.13070828037256363 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2153 0.12926730713924184 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2139 0.12842673941980415 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2062 0.12380361696289674 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2059 0.12362349530873151 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2024 0.12152207601013724 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2021 0.12134195435597203 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1998 0.11996102167403866 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1959 0.11761944016989075 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 1880 0.11287623661020653 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1872 0.11239591219909928 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 1819 0.10921376297551366 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 1789 0.10741254643386142 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 1785 0.1071723842283078 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 1732 0.1039902350047222 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1729 0.10381011335055697 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1727 0.10369003224778015 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTC 1719 0.1032097078366729 No Hit TTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAAC 1678 0.10074804522974816 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACT 1678 0.10074804522974816 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 6.004055138840773E-5 0.0 7 0.0 0.0 0.0 6.004055138840773E-5 0.0 8 0.0 0.0 0.0 6.004055138840773E-5 0.0 9 0.0 0.0 0.0 2.4016220555363093E-4 0.0 10 0.0 0.0 0.0 3.602433083304464E-4 0.0 11 0.0 0.0 0.0 5.403649624956695E-4 0.0 12 0.0 0.0 0.0 0.001080729924991339 0.0 13 0.0 0.0 0.0 0.0011407704763797468 0.0 14 0.0 0.0 0.0 0.0014409732333217856 0.0 15 0.0 0.0 0.0 0.0029419870180319788 0.0 16 0.0 0.0 0.0 0.004623122456907395 0.0 17 0.0 0.0 0.0 0.006724541755501666 0.0 18 0.0 0.0 0.0 0.00768519057771619 0.0 19 0.0 0.0 0.0 0.008886001605484344 0.0 20 0.0 0.0 0.0 0.011707907520739507 0.0 21 0.0 0.0 0.0 0.017351719351249833 0.0 22 0.0 0.0 0.0 0.031101005619195203 0.0 23 0.0 0.0 0.0 0.05223527970791472 0.0 24 0.0 0.0 0.0 0.08333628532710993 0.0 25 0.0 0.0 0.0 0.09348313851175084 0.0 26 0.0 0.0 0.0 0.10465068106999467 0.0 27 0.0 0.0 0.0 0.1957922380775976 0.0 28 0.0 0.0 0.0 0.29185712029905 0.0 29 0.0 0.0 0.0 0.40959664157171755 0.0 30 0.0 0.0 0.0 0.6589450514877748 0.0 31 0.0 0.0 0.0 0.9716362431186023 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5840 0.0 31.234589 1 ATTGGAC 585 0.0 25.931623 3 GTATTGG 600 0.0 24.358334 1 ACGTTTA 100 5.347829E-10 22.2 26 TTGGACC 1215 0.0 21.469135 4 TATACCG 95 7.1504473E-9 21.421053 5 CGGGCGT 125 1.8189894E-11 20.72 6 GGACCCT 1190 0.0 20.365545 6 TCACGTT 120 2.382876E-10 20.041666 24 TGGTCGG 65 6.904509E-5 19.923077 37 ATTCCGC 75 9.26987E-6 19.733334 15 TATTGGA 785 0.0 19.32484 2 ACCGTCG 125 4.129106E-10 19.24 23 TGGACCC 1270 0.0 19.228346 5 GCGTCGG 145 7.2759576E-12 19.13793 9 GACCCTC 1285 0.0 18.571983 7 CTACGCA 60 9.2391914E-4 18.5 27 CGTCTGT 685 0.0 18.09489 34 GACCGTC 135 1.1532393E-9 17.814816 22 ATCACGT 125 8.58563E-9 17.76 23 >>END_MODULE