##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088177_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 782702 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.59028979100603 31.0 31.0 33.0 28.0 34.0 2 30.966141647779104 31.0 31.0 34.0 28.0 34.0 3 31.139616354627943 31.0 31.0 34.0 28.0 34.0 4 35.18376470227494 35.0 35.0 37.0 33.0 37.0 5 35.05948624125146 35.0 35.0 37.0 32.0 37.0 6 35.10883324688068 37.0 35.0 37.0 32.0 37.0 7 34.914241946487934 36.0 35.0 37.0 32.0 37.0 8 35.04426716681444 37.0 35.0 37.0 32.0 37.0 9 36.48885399551809 38.0 35.0 39.0 32.0 39.0 10 36.377721022815834 38.0 35.0 39.0 32.0 39.0 11 36.42748070146748 38.0 35.0 39.0 32.0 39.0 12 36.25528489770053 38.0 35.0 39.0 32.0 39.0 13 36.32525661107292 38.0 35.0 39.0 32.0 39.0 14 37.182524127956746 39.0 36.0 41.0 32.0 41.0 15 37.24954069364841 39.0 36.0 41.0 32.0 41.0 16 37.216896085611125 39.0 36.0 41.0 32.0 41.0 17 37.37624792066457 39.0 36.0 41.0 32.0 41.0 18 37.411539768647586 39.0 36.0 41.0 32.0 41.0 19 37.53643021226469 39.0 36.0 41.0 32.0 41.0 20 37.51157528663527 39.0 36.0 41.0 32.0 41.0 21 37.40709746493557 39.0 36.0 41.0 32.0 41.0 22 37.3583266683872 39.0 36.0 41.0 32.0 41.0 23 37.2339638840836 39.0 36.0 41.0 31.0 41.0 24 37.13585374765875 39.0 36.0 41.0 31.0 41.0 25 37.051796213629196 39.0 36.0 40.0 31.0 41.0 26 36.76390631428053 38.0 35.0 40.0 31.0 41.0 27 36.611876550717895 38.0 35.0 40.0 30.0 41.0 28 36.42190897685198 38.0 35.0 40.0 30.0 41.0 29 36.27259672263518 38.0 35.0 40.0 30.0 41.0 30 36.07623974386165 38.0 35.0 40.0 30.0 41.0 31 35.740297073471126 38.0 34.0 40.0 29.0 41.0 32 35.42337952375234 38.0 34.0 40.0 28.0 41.0 33 35.4653060807306 38.0 34.0 40.0 28.0 41.0 34 35.40437612271337 38.0 34.0 40.0 27.0 41.0 35 35.26012198767858 38.0 34.0 40.0 27.0 41.0 36 35.123035331454375 38.0 34.0 40.0 26.0 41.0 37 34.94301279414132 38.0 34.0 40.0 25.0 41.0 38 34.76173946150642 38.0 33.0 40.0 24.0 41.0 39 34.613635840971405 38.0 33.0 40.0 23.0 41.0 40 34.352783051531745 38.0 33.0 40.0 22.0 41.0 41 34.15994976376705 38.0 33.0 40.0 21.0 41.0 42 33.87828062276575 38.0 33.0 40.0 18.0 41.0 43 33.49691325689726 37.0 33.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 2.0 16 6.0 17 13.0 18 61.0 19 143.0 20 291.0 21 646.0 22 1120.0 23 1919.0 24 3247.0 25 5009.0 26 7651.0 27 10946.0 28 15404.0 29 20718.0 30 26361.0 31 31915.0 32 38908.0 33 47846.0 34 57630.0 35 68697.0 36 84943.0 37 110350.0 38 123989.0 39 124887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.565249609685424 24.555961272617164 15.260469501802728 20.618319615894684 2 17.19901060684654 23.453881553899187 37.21045813093617 22.13664970831811 3 20.16016312721828 25.893124075318575 33.53932914442534 20.40738365303781 4 12.6423594164829 15.38184392016374 34.445804405763624 37.52999225758973 5 10.176031235387159 41.94061085828323 34.192451277753214 13.690906628576393 6 30.925051935474805 35.38485911624092 15.090034265914742 18.600054682369535 7 22.97796607137838 37.674363934166514 20.419393332328266 18.928276662126837 8 28.502546307534672 33.26080679492323 19.99496615570166 18.241680741840444 9 24.863230194888988 13.745461235566026 25.676949848090334 35.71435872145465 10 16.64758745985062 28.5458578105077 32.9162312093236 21.890323520318077 11 29.797802995265123 21.7057066418637 26.320745315586265 22.175745047284916 12 20.177283308334463 28.614210772426794 31.81044637678197 19.39805954245677 13 31.75410309415333 21.274124762681073 30.50318000976106 16.468592133404538 14 20.356534159871828 23.739941893594242 29.90806207215517 25.995461874378755 15 22.4902964346584 29.38512997283768 28.76509833883138 19.359475253672535 16 20.664058607234935 28.88366198118824 28.5038239329911 21.94845547858572 17 17.737274211641214 27.535256074470233 28.79256728614466 25.934902427743893 18 19.01949911971606 26.654716609897513 35.20254196360811 19.123242306778316 19 17.988455376375683 24.81008097590143 36.966303906212076 20.235159741510817 20 24.141244049459438 22.87205092104019 35.385881216606066 17.600823812894305 21 23.068038666056815 24.40354055566486 33.52578631458716 19.002634463691162 22 20.465260086214165 24.12757345707562 34.514412892774004 20.89275356393621 23 19.386944200985816 26.731246374737765 36.10825064967255 17.773558774603874 24 17.22034695196895 25.724860802706523 34.03709202225112 23.017700223073405 25 18.94922971961232 26.966201696175556 35.807625379774166 18.27694320443796 26 21.16527107379309 25.409287314967894 33.651121371863105 19.774320239375907 27 19.287417177929786 27.390756635347806 32.96912490321987 20.352701283502533 28 18.68335586212888 26.678863731024066 33.267194922205384 21.370585484641662 29 17.419017710444077 26.619837434936922 34.5827658546931 21.3783789999259 30 16.617563261624476 26.600162002907872 37.81106985800471 18.971204877462945 31 18.695110016328055 25.957644160868377 35.70669296871606 19.640552854087506 32 20.57666902601501 26.317934539582115 32.85388308704974 20.251513347353143 33 21.80497813982844 26.19272724485181 32.08219731136499 19.920097303954762 34 18.99803501204801 30.2283627740826 32.13215246671147 18.641449747157925 35 17.084407603404618 31.119762055034993 32.42920038533184 19.36662995622855 36 18.342357627807264 26.011687717675436 35.78590574701483 19.860048907502474 37 18.581784638342562 26.373511246936893 34.41552468244619 20.629179432274352 38 19.324085028529375 25.79244718935176 35.18963794649816 19.693829835620708 39 20.675301711251535 25.170754642252096 34.71193378833834 19.44200985815802 40 18.11123518273877 26.248942764934803 33.700437714481374 21.939384337845055 41 19.353598176572948 25.647564462592403 33.37157692199585 21.627260438838793 42 16.008008156360916 27.80994554760305 34.10812799762873 22.073918298407314 43 16.871299677271807 27.736354321312582 33.571525305927416 21.820820695488194 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 52.0 1 92.0 2 132.0 3 370.0 4 608.0 5 608.0 6 1205.0 7 1802.0 8 2066.5 9 2331.0 10 3527.0 11 4723.0 12 4723.0 13 8578.0 14 12433.0 15 21201.0 16 29969.0 17 28883.5 18 27798.0 19 27798.0 20 29129.0 21 30460.0 22 23862.5 23 17265.0 24 18298.5 25 19332.0 26 19332.0 27 19760.5 28 20189.0 29 19828.5 30 19468.0 31 20433.5 32 21399.0 33 21399.0 34 22826.5 35 24254.0 36 26788.5 37 29323.0 38 29966.5 39 30610.0 40 30610.0 41 32820.0 42 35030.0 43 43162.0 44 51294.0 45 71781.0 46 92268.0 47 92268.0 48 92795.0 49 93322.0 50 81779.0 51 70236.0 52 62587.5 53 54939.0 54 54939.0 55 46123.0 56 37307.0 57 27921.0 58 18535.0 59 15234.0 60 11933.0 61 11933.0 62 10216.5 63 8500.0 64 7322.0 65 6144.0 66 5071.5 67 3999.0 68 3999.0 69 3398.0 70 2797.0 71 2302.5 72 1808.0 73 1449.5 74 1091.0 75 1091.0 76 859.0 77 627.0 78 497.0 79 367.0 80 283.5 81 200.0 82 200.0 83 138.0 84 76.0 85 61.0 86 46.0 87 35.5 88 25.0 89 25.0 90 15.5 91 6.0 92 5.0 93 4.0 94 2.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 782702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.721992494507106 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07364619904695 33.78183719428994 2 11.343245912691312 9.692121334906933 3 3.778056810762761 4.842183441396843 4 1.652945605138298 2.8246851894618743 5 0.9391416528030174 2.006100132116475 6 0.6005658715834289 1.539442239494662 7 0.3910323561590808 1.1693976969456374 8 0.2955517410798872 1.0101247411322758 9 0.22701029463874234 0.8728498893358975 >10 1.4550999540295864 11.897859026778153 >50 0.12623062638285792 3.679247477507895 >100 0.09301202187837344 8.118262542838117 >500 0.013287431696909366 4.1069312916353535 >1k 0.009965573772682024 8.501565808865118 >5k 3.019870840206674E-4 0.8320170860351334 >10k+ 9.059612520620022E-4 5.12537490725969 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14024 1.7917419400998083 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13856 1.7702778324317558 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11847 1.5136028782346282 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6449 0.8239406568527997 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4401 0.5622829633755887 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3975 0.5078561189315985 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 3793 0.48460333562454166 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3719 0.4751489072469471 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3228 0.4124174973361509 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3219 0.4112676344253624 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2992 0.38226553656436296 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2930 0.3743442587344864 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2700 0.3449588732365575 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2416 0.30867431027389736 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2329 0.29755896880294164 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2322 0.2966646309834394 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1886 0.24096016108301754 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1827 0.23342217089007056 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1823 0.23291112070749787 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1805 0.2306113948859208 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1774 0.22665075597098258 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1462 0.1867888417303137 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1322 0.16890208534027 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1288 0.16455815878840221 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1278 0.16328053333197054 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1263 0.161364095147323 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1230 0.1571479311410984 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1186 0.15152637913279896 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1152 0.14718245258093118 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1125 0.14373286384856562 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 1100 0.14053880020748638 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 1076 0.1374724991120503 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1068 0.13645039874690496 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1062 0.13568382347304594 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 1059 0.13530053583611643 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 1058 0.13517277329047325 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1028 0.13133989692117817 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 988 0.1262293950954514 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 973 0.12431295691080387 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAACTGTCTCT 935 0.11945798017636342 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 905 0.11562510380706834 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 895 0.11434747835063663 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 892 0.11396419071370713 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 890 0.11370866562242078 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 884 0.11294209034856179 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 868 0.11089788961827106 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 868 0.11089788961827106 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 852 0.10885368888798035 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 848 0.10834263870540767 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACT 836 0.10680948815768965 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTG 833 0.10642620052076013 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCCTGTCT 831 0.1061706754294738 No Hit GCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 822 0.10502081251868528 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 812 0.10374318706225358 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 790 0.10093241105810385 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 785 0.100293598329888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.2776254564316944E-4 0.0 0.0 0.0 0.0 7 1.2776254564316944E-4 0.0 0.0 0.0 0.0 8 2.555250912863389E-4 0.0 0.0 0.0 0.0 9 2.555250912863389E-4 0.0 0.0 0.0 0.0 10 2.555250912863389E-4 0.0 0.0 5.110501825726778E-4 0.0 11 3.8328763692950827E-4 0.0 0.0 7.665752738590165E-4 0.0 12 3.8328763692950827E-4 0.0 0.0 0.001533150547718033 0.0 13 5.110501825726778E-4 0.0 0.0 0.0016609130933612026 0.0 14 5.110501825726778E-4 0.0 0.0 0.002044200730290711 0.0 15 5.110501825726778E-4 0.0 0.0 0.0028107760041497275 0.0 16 5.110501825726778E-4 0.0 0.0 0.00447168909751093 0.0 17 5.110501825726778E-4 0.0 0.0 0.007154702556017488 0.0 18 5.110501825726778E-4 0.0 0.0 0.00868785310373552 0.0 19 5.110501825726778E-4 0.0 0.0 0.009965478560167216 0.0 20 5.110501825726778E-4 0.0 0.0 0.01354282983817596 0.0 21 5.110501825726778E-4 0.0 0.0 0.019419906937761754 0.0 22 5.110501825726778E-4 0.0 0.0 0.03372931204979673 0.0 23 5.110501825726778E-4 0.0 0.0 0.05774867063071258 0.0 24 5.110501825726778E-4 0.0 0.0 0.08675076849171204 0.0 25 5.110501825726778E-4 0.0 0.0 0.099527023056029 0.0 26 5.110501825726778E-4 0.0 0.0 0.1137086656224208 0.0 27 5.110501825726778E-4 0.0 0.0 0.23546637162036127 0.0 28 5.110501825726778E-4 0.0 0.0 0.36016261616809464 0.0 29 5.110501825726778E-4 0.0 0.0 0.5032566672884444 0.0 30 5.110501825726778E-4 0.0 0.0 0.8271347204938789 0.0 31 6.388127282158471E-4 0.0 0.0 1.236613679280237 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCACA 20 0.0018415772 37.0 1 GGTATCA 2795 0.0 29.65295 1 GTCCGCT 25 0.005495285 29.6 9 ATTGGAC 170 0.0 26.117647 3 AATTACG 40 0.0019306396 23.125 16 GTATTGG 185 0.0 23.0 1 GTTATCA 90 3.8235157E-9 22.61111 1 GGACCCT 405 0.0 22.382715 6 TATTGGA 200 0.0 21.275002 2 TTGGACC 430 0.0 21.081394 4 GACCCTC 440 0.0 20.602272 7 ATTACGT 45 0.0038247341 20.555555 17 CGTTAAA 45 0.0038247341 20.555555 21 TACGTTA 45 0.0038247341 20.555555 19 TGGACCC 440 0.0 20.181818 5 GCGCGTG 50 0.0070329253 18.5 13 ATAATAC 50 0.0070329253 18.5 3 AAGACGT 60 9.2332275E-4 18.5 5 TAAGTCG 70 1.2185664E-4 18.5 5 GTACGGG 60 9.2332275E-4 18.5 37 >>END_MODULE