##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088176_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 862260 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.540003015331802 31.0 31.0 33.0 28.0 34.0 2 30.949953610279962 31.0 31.0 34.0 28.0 34.0 3 31.139238744694175 31.0 31.0 34.0 28.0 34.0 4 35.18409528448496 35.0 35.0 37.0 33.0 37.0 5 35.049043212024216 35.0 35.0 37.0 32.0 37.0 6 35.096142694778834 37.0 35.0 37.0 32.0 37.0 7 34.89619256372788 36.0 35.0 37.0 32.0 37.0 8 35.00799874747756 36.0 35.0 37.0 32.0 37.0 9 36.481336255885694 38.0 35.0 39.0 32.0 39.0 10 36.36732192146221 38.0 35.0 39.0 32.0 39.0 11 36.408286363741794 38.0 35.0 39.0 32.0 39.0 12 36.22409482058776 38.0 35.0 39.0 32.0 39.0 13 36.28907406118804 38.0 35.0 39.0 32.0 39.0 14 37.15482453088396 39.0 36.0 41.0 31.0 41.0 15 37.23129682462366 39.0 36.0 41.0 32.0 41.0 16 37.20092547491476 39.0 36.0 41.0 32.0 41.0 17 37.324245587177884 39.0 36.0 41.0 32.0 41.0 18 37.341334400296894 39.0 36.0 40.0 32.0 41.0 19 37.45016584324914 39.0 36.0 41.0 32.0 41.0 20 37.4269489481131 39.0 36.0 41.0 32.0 41.0 21 37.31175515505764 39.0 36.0 41.0 31.0 41.0 22 37.27007167211746 39.0 36.0 41.0 31.0 41.0 23 37.143822049033936 39.0 36.0 40.0 31.0 41.0 24 37.05796163570153 39.0 36.0 40.0 31.0 41.0 25 36.964596525409966 39.0 35.0 40.0 31.0 41.0 26 36.70633451627119 38.0 35.0 40.0 30.0 41.0 27 36.57028506482963 38.0 35.0 40.0 30.0 41.0 28 36.424554078816136 38.0 35.0 40.0 30.0 41.0 29 36.284126597545985 38.0 35.0 40.0 30.0 41.0 30 36.10672418991951 38.0 35.0 40.0 30.0 41.0 31 35.80964790202491 38.0 34.0 40.0 29.0 41.0 32 35.495239254981094 38.0 34.0 40.0 28.0 41.0 33 35.60619650685408 38.0 34.0 40.0 29.0 41.0 34 35.574153967480804 38.0 34.0 40.0 28.0 41.0 35 35.46861387516526 38.0 34.0 40.0 27.0 41.0 36 35.35702920232876 38.0 34.0 40.0 27.0 41.0 37 35.2251223528866 38.0 34.0 40.0 26.0 41.0 38 35.078811495372626 38.0 34.0 40.0 25.0 41.0 39 35.00783870294343 38.0 34.0 40.0 25.0 41.0 40 34.803831790875144 38.0 33.0 40.0 24.0 41.0 41 34.64333611671653 38.0 33.0 40.0 23.0 41.0 42 34.40851251362698 38.0 33.0 40.0 22.0 41.0 43 34.055518057198526 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 1.0 16 8.0 17 21.0 18 59.0 19 136.0 20 293.0 21 586.0 22 1086.0 23 1908.0 24 3177.0 25 4992.0 26 7756.0 27 11325.0 28 15937.0 29 21867.0 30 28289.0 31 34700.0 32 42830.0 33 52604.0 34 63498.0 35 76480.0 36 95335.0 37 121850.0 38 142997.0 39 134524.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.3515876881683 24.397397536705867 14.609978428780183 21.64103634634565 2 17.2290260478278 23.353744810150072 37.05761603228724 22.359613109734884 3 19.700090459954076 25.965370073991608 33.1638948808944 21.170644585159927 4 12.69234337670772 15.829796117180434 35.383758959014685 36.09410154709716 5 10.692946443068216 41.0435367522557 34.82777816435878 13.435738640317304 6 31.09201400969545 36.14130308723587 15.50216871941178 17.2645141836569 7 23.833066592443114 36.20149374898523 21.21274325609445 18.752696402477213 8 27.72910722983787 33.55275670911326 20.343399902581588 18.374736158467282 9 24.899334307517453 13.842460510750817 24.787071185025397 36.47113399670633 10 16.270382483241715 28.24240948205878 33.942662306032986 21.544545728666527 11 30.71416973998562 21.969823487115256 25.795235775752097 21.520770997147032 12 20.10901584208939 28.020782594577042 31.856168673022054 20.014032890311505 13 31.11544081831466 21.362466077517222 29.531463827615802 17.990629276552315 14 20.612808201702503 23.135249228770903 29.059448426228744 27.192494143297846 15 22.577528819613573 29.485885927678428 27.664857467585186 20.271727785122817 16 21.24567995732146 28.917031985711965 27.734905944842623 22.10238211212395 17 18.67603739011435 27.696518451511142 28.225477234244888 25.401966924129617 18 19.754598380998768 26.955790596803748 33.57467585183123 19.714935170366246 19 18.98081785076427 25.27137986222253 35.03340059842739 20.71440168858581 20 23.91598821701111 24.04263215271496 33.48804304966019 18.553336580613735 21 23.29575766010252 25.08187785586714 31.992322501333703 19.630041982696632 22 21.05467028506483 24.741841207988312 32.905736088882705 21.297752418064157 23 20.163639737434185 27.17985294458748 34.053533736923896 18.60297358105444 24 18.556351912416208 26.07716929928328 32.34302878482128 23.02345000347923 25 19.928211908241135 27.095655602718438 33.82587618583722 19.15025630320321 26 21.512652796140376 25.955860181383805 32.07814348340408 20.453343539071742 27 19.919165912833716 27.505160856354234 31.660751977361816 20.914921253450235 28 19.65381671421613 27.084406095609214 31.70273467399624 21.559042516178415 29 18.689954306125763 27.007515134646166 32.71808967132883 21.58444088789924 30 17.93043861480296 27.002528239742073 35.349778489086816 19.717254656368148 31 19.762484633405236 26.363393871917985 33.82088929093313 20.05323220374365 32 20.965833971191984 26.705981954398904 31.394822907243753 20.93336116716536 33 22.01111033794911 26.66991394706933 30.74826618421358 20.57070953076798 34 19.754946303899057 29.918702015633336 30.890102753229886 19.436248927237724 35 18.261893164474753 30.925474914758887 31.0032936701227 19.809338250643655 36 19.359705889174958 26.622248509730245 33.75130471087607 20.266740890218728 37 19.469185628464732 27.02630297126157 32.5626841092014 20.941827291072297 38 19.911163686127153 26.535847656159394 33.423561338807325 20.129427318906128 39 21.18061837496811 25.845452647693275 33.00303852666249 19.97089045067613 40 19.031846542806115 26.78588824716443 32.23702827453436 21.945236935495092 41 20.125484192702896 26.043652726555795 32.143437014357616 21.68742606638369 42 17.25697585415072 27.95734465242502 32.659638624080905 22.126040869343353 43 17.93844084150952 27.75067844965556 32.32308120520493 21.987799503629997 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65.0 1 98.0 2 131.0 3 364.0 4 597.0 5 597.0 6 1115.0 7 1633.0 8 1844.0 9 2055.0 10 3036.5 11 4018.0 12 4018.0 13 7522.5 14 11027.0 15 18214.0 16 25401.0 17 24997.5 18 24594.0 19 24594.0 20 26053.0 21 27512.0 22 22404.0 23 17296.0 24 18746.5 25 20197.0 26 20197.0 27 21797.0 28 23397.0 29 24084.0 30 24771.0 31 26552.0 32 28333.0 33 28333.0 34 30538.0 35 32743.0 36 35034.0 37 37325.0 38 38447.0 39 39569.0 40 39569.0 41 41560.0 42 43551.0 43 50317.0 44 57083.0 45 74095.5 46 91108.0 47 91108.0 48 92325.0 49 93542.0 50 83261.5 51 72981.0 52 66801.0 53 60621.0 54 60621.0 55 51726.0 56 42831.0 57 33591.0 58 24351.0 59 20653.0 60 16955.0 61 16955.0 62 14851.0 63 12747.0 64 10817.0 65 8887.0 66 7392.5 67 5898.0 68 5898.0 69 5041.5 70 4185.0 71 3538.0 72 2891.0 73 2325.5 74 1760.0 75 1760.0 76 1395.0 77 1030.0 78 785.0 79 540.0 80 432.0 81 324.0 82 324.0 83 232.5 84 141.0 85 115.5 86 90.0 87 72.5 88 55.0 89 55.0 90 37.0 91 19.0 92 11.5 93 4.0 94 2.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 862260.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.090477831550075 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96143883835566 37.9729332400324 2 11.779467480632775 11.329604394896709 3 3.8251604581107754 5.518613826386944 4 1.7275331148380706 3.3231157184955546 5 0.8541812668572861 2.053899263896284 6 0.5522958755389262 1.593610353543676 7 0.37162302287490967 1.251007012028163 8 0.280975930454341 1.0809813403770911 9 0.22565293834280856 0.9766581866099071 >10 1.2532613809737674 11.193612718884689 >50 0.08712550815264422 2.8838929840432805 >100 0.06303174814690402 6.080828392308528 >500 0.010951462032649847 3.7645731289608917 >1k 0.006327511396642133 6.226420911330236 >5k 2.433658229477744E-4 0.7181315898558736 >10k+ 7.300974688433232E-4 4.03211693834983 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12218 1.4169739985619187 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11857 1.375107276227588 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10377 1.2034653120868415 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6136 0.711618305383527 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3899 0.45218379607079073 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3704 0.4295688075522464 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3568 0.413796302739313 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3462 0.40150302692923245 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 3224 0.3739011435065989 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2894 0.33562962447521627 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2758 0.31985711966228286 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2551 0.2958504395425973 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2417 0.2803098833298541 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2167 0.2513163083060794 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2085 0.24180641569828126 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2030 0.2354278291930508 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1845 0.21397258367545752 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1796 0.20828984297079767 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1557 0.18057198524806903 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1556 0.18045601094797392 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1524 0.17674483334493077 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1258 0.14589566951963445 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1216 0.1410247489156403 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1200 0.13916916011411873 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1176 0.13638577691183634 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1158 0.13429823951012454 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1072 0.12432444970194605 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1042 0.12084522069909308 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1023 0.1186417089972862 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1019 0.1181778117969058 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 972 0.11272701969243615 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 958 0.11110337949110478 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 955 0.11075545659081948 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 943 0.10936376498967829 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 898 0.10414492148539883 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 887 0.10286920418435275 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 884 0.10252128128406746 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 870 0.10089764108273606 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.1597430009509893E-4 0.0 2 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 3 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 4 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 5 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 6 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 7 0.0 1.1597430009509893E-4 0.0 1.1597430009509893E-4 0.0 8 0.0 1.1597430009509893E-4 0.0 2.3194860019019786E-4 0.0 9 0.0 1.1597430009509893E-4 0.0 2.3194860019019786E-4 0.0 10 0.0 1.1597430009509893E-4 0.0 3.479229002852968E-4 0.0 11 0.0 1.1597430009509893E-4 0.0 6.958458005705936E-4 0.0 12 0.0 1.1597430009509893E-4 0.0 9.277944007607914E-4 0.0 13 0.0 1.1597430009509893E-4 0.0 0.0010437687008558903 0.0 14 0.0 1.1597430009509893E-4 0.0 0.0013916916011411872 0.0 15 0.0 1.1597430009509893E-4 0.0 0.0018555888015215829 0.0 16 0.0 1.1597430009509893E-4 0.0 0.003015331802472572 0.0 17 0.0 1.1597430009509893E-4 0.0 0.0049868949040892535 0.0 18 0.0 1.1597430009509893E-4 0.0 0.005914689304850045 0.0 19 0.0 1.1597430009509893E-4 0.0 0.006262612205135342 0.0 20 0.0 1.1597430009509893E-4 0.0 0.007770278106371628 0.0 21 0.0 1.1597430009509893E-4 0.0 0.009973789808178507 0.0 22 0.0 1.1597430009509893E-4 0.0 0.01600445341312365 0.0 23 0.0 1.1597430009509893E-4 0.0 0.02481850022035117 0.0 24 0.0 1.1597430009509893E-4 0.0 0.03861944193166794 0.0 25 0.0 1.1597430009509893E-4 0.0 0.04534595133718368 0.0 26 0.0 1.1597430009509893E-4 0.0 0.055551689745552385 0.0 27 0.0 1.1597430009509893E-4 0.0 0.1420685176164962 0.0 28 0.0 1.1597430009509893E-4 0.0 0.2276575510866792 0.0 29 0.0 1.1597430009509893E-4 0.0 0.3239162201656113 0.0 30 0.0 1.1597430009509893E-4 0.0 0.5272191682323197 0.0 31 0.0 1.1597430009509893E-4 0.0 0.821793890473871 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2445 0.0 31.09816 1 CCGTATC 25 0.00549559 29.6 9 CGAACCT 135 0.0 23.296297 32 GTATTGG 190 0.0 22.394737 1 TATTGGA 225 0.0 20.555553 2 TAGAACC 55 5.141662E-4 20.181818 4 TGCGTTC 75 9.261372E-6 19.733334 32 TCGAACC 160 0.0 19.65625 31 ATTGGAC 205 0.0 18.951221 3 CGTCTGT 325 0.0 18.784615 34 TTCACGG 50 0.0070334896 18.5 30 ATCACGT 50 0.0070334896 18.5 23 ACGCTCC 50 0.0070334896 18.5 27 TAGATTG 50 0.0070334896 18.5 5 GTATCAA 4395 0.0 17.552902 2 CTAGTAC 75 2.0665121E-4 17.266666 3 ATCCACG 75 2.0665121E-4 17.266666 1 TTGGACC 465 0.0 17.107527 4 GGACCCT 470 0.0 16.531914 6 GCGTCTG 385 0.0 16.337662 33 >>END_MODULE