##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088174_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2061591 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0797747952916 31.0 31.0 33.0 30.0 34.0 2 31.214681767625102 31.0 31.0 34.0 28.0 34.0 3 31.249110517071525 31.0 31.0 34.0 28.0 34.0 4 35.225081017524815 37.0 35.0 37.0 33.0 37.0 5 35.110011151581475 37.0 35.0 37.0 32.0 37.0 6 35.17351986887797 37.0 35.0 37.0 32.0 37.0 7 34.99841627170472 37.0 35.0 37.0 32.0 37.0 8 35.06366296709677 37.0 35.0 37.0 32.0 37.0 9 36.52198423450626 39.0 35.0 39.0 32.0 39.0 10 36.387172819438966 38.0 35.0 39.0 32.0 39.0 11 36.42620966040306 38.0 35.0 39.0 32.0 39.0 12 36.26828454334541 38.0 35.0 39.0 32.0 39.0 13 36.31273564931163 38.0 35.0 39.0 32.0 39.0 14 37.19557710525512 39.0 36.0 41.0 31.0 41.0 15 37.25882000843038 39.0 36.0 41.0 32.0 41.0 16 37.23129563526422 39.0 36.0 41.0 32.0 41.0 17 37.37975088172193 39.0 36.0 41.0 32.0 41.0 18 37.41316876140806 39.0 36.0 41.0 32.0 41.0 19 37.52313625738568 39.0 36.0 41.0 32.0 41.0 20 37.49134818691001 39.0 36.0 41.0 32.0 41.0 21 37.37904366093954 39.0 36.0 41.0 32.0 41.0 22 37.34435055255868 39.0 36.0 41.0 32.0 41.0 23 37.216617651124785 39.0 36.0 41.0 31.0 41.0 24 37.13607742757899 39.0 36.0 41.0 31.0 41.0 25 37.04484594664994 39.0 36.0 40.0 31.0 41.0 26 36.75122757132719 39.0 35.0 40.0 30.0 41.0 27 36.58460577292004 38.0 35.0 40.0 30.0 41.0 28 36.40945463964482 38.0 35.0 40.0 30.0 41.0 29 36.26152762599371 38.0 35.0 40.0 30.0 41.0 30 36.05387974627363 38.0 35.0 40.0 30.0 41.0 31 35.7402831114416 38.0 34.0 40.0 29.0 41.0 32 35.43577702851827 38.0 34.0 40.0 27.0 41.0 33 35.49058421384261 38.0 34.0 40.0 28.0 41.0 34 35.430398173061484 38.0 34.0 40.0 27.0 41.0 35 35.320492765053785 38.0 34.0 40.0 27.0 41.0 36 35.196122800303264 38.0 34.0 40.0 26.0 41.0 37 35.01661726307498 38.0 34.0 40.0 25.0 41.0 38 34.84893269324517 38.0 33.0 40.0 25.0 41.0 39 34.7123488606615 38.0 33.0 40.0 24.0 41.0 40 34.47876761200452 38.0 33.0 40.0 23.0 41.0 41 34.279096096170385 38.0 33.0 40.0 21.0 41.0 42 33.99613502387234 38.0 33.0 40.0 19.0 41.0 43 33.645530078468525 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 1.0 15 5.0 16 39.0 17 72.0 18 168.0 19 379.0 20 831.0 21 1704.0 22 3047.0 23 5198.0 24 8447.0 25 13621.0 26 20105.0 27 28996.0 28 40993.0 29 54167.0 30 68303.0 31 83156.0 32 100459.0 33 121804.0 34 147267.0 35 175386.0 36 219349.0 37 289815.0 38 335390.0 39 342886.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.28626434632282 23.42855590657895 15.043478556124857 21.24170119097338 2 17.107709531133963 23.641837784507207 36.7569027998279 22.49354988453093 3 19.871254773619015 26.066275997518424 33.21662735237009 20.84584187649248 4 12.81267719930869 15.760934152312462 34.75204344605695 36.674345202321895 5 10.524395964087931 41.607234412645376 34.26567151292376 13.602698110342933 6 31.18475003043766 35.702425941906036 15.285912676180677 17.826911351475633 7 23.639315460729115 36.83334861279468 20.882415571274805 18.644920355201393 8 28.34737831121692 33.17801639607468 20.002561128759293 18.472044163949107 9 24.97900893048136 13.808898079201937 25.400722063687702 35.811370926628996 10 16.507590496854128 28.73853252172715 33.32644544917008 21.427431532248637 11 30.274967246170554 22.056751314882536 25.93788001596825 21.73040142297866 12 20.44333720898083 28.756673850438812 31.52487569066803 19.275113249912327 13 31.209730737086065 21.578479921575134 30.00270179681615 17.209087544522653 14 20.722442036271985 23.46959217419944 29.820124360263506 25.987841429265067 15 22.47579660563128 29.77850601792499 28.070359251665337 19.67533812477839 16 20.909918601701307 28.55648865366603 28.562066869713732 21.971525874918935 17 18.33312233124805 27.88690870303567 28.757886506101354 25.022082459614932 18 19.263083705739888 26.835293712477405 34.57033912158134 19.33128346020137 19 18.608686204004577 25.164787777983122 36.37414016650247 19.85238585150983 20 23.6580873703853 23.67099002663477 34.79657216198557 17.87435044099436 21 22.893386709584977 24.97241208367712 33.118208218798 19.015992987939896 22 20.563875181837716 24.8261658107743 34.082657520332596 20.527301487055386 23 19.620671607510896 27.171926924399653 35.22080761897001 17.98659384911944 24 17.772487365340652 26.373950992219115 33.40837246573156 22.44518917670867 25 19.363976656863557 27.28902095517491 34.968575241160835 18.3784271468007 26 20.976905700500247 25.982263213217365 33.231809801265136 19.809021285017252 27 19.127460296440955 27.69322334061412 32.80335430257505 20.37596206036988 28 19.13289299380915 27.250215973973503 32.757030856265864 20.859860175951486 29 17.83918342678058 27.168822525903536 33.86801746806229 21.123976579253593 30 17.276220162001096 27.13287941206573 36.65964781569186 18.931252610241316 31 19.201480798082645 26.576755525222996 34.751315852659424 19.47044782403493 32 20.333567618407336 27.02097554752616 32.47656785463266 20.168888979433845 33 21.447173566434856 26.924981725279167 31.703815160233045 19.924029548052935 34 19.240285779284058 30.222143965510135 31.757754084103006 18.7798161711028 35 17.49541979956257 31.192074470639426 32.044183351595926 19.268322378202075 36 18.803778246994675 26.862311680638882 34.5994428574824 19.734467214884038 37 18.782241482427892 27.204959664647355 33.53041413161 20.48238472131475 38 19.375278607638467 26.853920103454083 34.140573954775704 19.630227334131746 39 20.61621340023312 26.054246453345986 33.814806137589855 19.514734008831045 40 18.359558224691515 26.978726624243123 33.03987066299766 21.62184448806771 41 19.281079515772042 26.36876082598343 32.936455388095894 21.413704270148635 42 16.430320078036818 28.34927005405049 33.39716752740966 21.82324234050304 43 17.045136498946686 28.05731107673636 33.08386581043475 21.81368661388219 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 202.0 1 321.0 2 440.0 3 1167.5 4 1895.0 5 1895.0 6 3379.5 7 4864.0 8 5499.0 9 6134.0 10 9036.5 11 11939.0 12 11939.0 13 21416.5 14 30894.0 15 51821.0 16 72748.0 17 71308.5 18 69869.0 19 69869.0 20 73969.0 21 78069.0 22 61754.0 23 45439.0 24 48027.5 25 50616.0 26 50616.0 27 53469.0 28 56322.0 29 56623.0 30 56924.0 31 59809.0 32 62694.0 33 62694.0 34 67952.5 35 73211.0 36 79024.5 37 84838.0 38 86688.0 39 88538.0 40 88538.0 41 94162.5 42 99787.0 43 115057.0 44 130327.0 45 174630.0 46 218933.0 47 218933.0 48 221601.5 49 224270.0 50 201376.0 51 178482.0 52 160529.5 53 142577.0 54 142577.0 55 121758.5 56 100940.0 57 77569.5 58 54199.0 59 45949.5 60 37700.0 61 37700.0 62 32592.5 63 27485.0 64 23073.0 65 18661.0 66 15415.5 67 12170.0 68 12170.0 69 10097.0 70 8024.0 71 6696.5 72 5369.0 73 4292.5 74 3216.0 75 3216.0 76 2501.5 77 1787.0 78 1344.0 79 901.0 80 733.0 81 565.0 82 565.0 83 415.0 84 265.0 85 207.0 86 149.0 87 119.5 88 90.0 89 90.0 90 66.0 91 42.0 92 28.0 93 14.0 94 7.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2061591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.20492997045352 #Duplication Level Percentage of deduplicated Percentage of total 1 69.38833312422558 23.040347421564107 2 14.040630790376058 9.324363242708609 3 5.965040750876511 5.942062812112681 4 3.157549108604538 4.193847881179265 5 1.8380994898605552 3.0516982419773035 6 1.1848618660117316 2.360595317134826 7 0.8280277608250444 1.9246222668250923 8 0.5694087944985028 1.5125743316706517 9 0.4217641438792409 1.2604183975402627 >10 2.2491655647027673 13.81756228984066 >50 0.20400872343978513 4.734158416104868 >100 0.12417147147593446 7.876888881350573 >500 0.013583335880562429 2.986235407648358 >1k 0.01299275605966841 8.134442105713791 >5k 0.0016240945074585513 3.6967115622261097 >10k+ 7.382247761175233E-4 6.143471424402926 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35326 1.7135309574013466 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34724 1.6843302090472843 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29841 1.4474743050391663 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14426 0.6997508235144605 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10995 0.533325960386905 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9403 0.45610404779609537 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9353 0.4536787364710071 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7814 0.3790276538847909 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7223 0.3503604740222479 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7009 0.3399801415508702 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6922 0.33576009984521665 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6223 0.301854247520483 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5974 0.2897761971215435 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5190 0.2517473155441598 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5149 0.24975856025758747 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5144 0.24951602912507861 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4955 0.2403483523162451 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4387 0.21279681566324263 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4248 0.20605445017949728 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3659 0.17748428276995776 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3552 0.1722941165342689 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3448 0.16724946897808537 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3346 0.16230183387490535 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3089 0.14983573366395178 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3061 0.14847755932190237 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2898 0.14057104440211468 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2862 0.13882482024805115 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2725 0.13217946721730936 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2661 0.1290750687211964 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2650 0.12854150022967697 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2625 0.12732884456713287 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2614 0.12679527607561344 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2567 0.1245154834300305 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2381 0.11549332530070222 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2379 0.11539631284769869 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 2371 0.11500826303568457 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2350 0.1139896322791475 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAAAAAAA 2215 0.10744129170140926 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2209 0.10715025434239867 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 2149 0.10423988075229276 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2107 0.10220261923921865 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.455186795052947E-4 0.0 9 0.0 0.0 0.0 1.455186795052947E-4 0.0 10 0.0 0.0 0.0 1.455186795052947E-4 0.0 11 0.0 0.0 0.0 1.455186795052947E-4 0.0 12 0.0 0.0 0.0 1.940249060070596E-4 0.0 13 0.0 0.0 0.0 3.395435855123543E-4 0.0 14 0.0 0.0 0.0 5.820747180211788E-4 0.0 15 0.0 0.0 0.0 9.701245300352979E-4 0.0 16 0.0 0.0 0.0 0.0015521992480564768 0.0 17 0.0 0.0 0.0 0.0027648549106005994 0.0 18 0.0 0.0 0.0 0.0031043984961129536 0.0 19 0.0 0.0 0.0 0.0037349794406358974 0.0 20 0.0 0.0 0.0 0.005093153782685315 0.0 21 0.0 0.0 0.0 0.00693639038975238 0.0 22 0.0 0.0 0.0 0.010622863603886513 0.0 23 0.0 0.0 0.0 0.018480872297172428 0.0 24 0.0 0.0 0.0 0.02992834175158894 0.0 25 0.0 0.0 0.0 0.03570058270529897 0.0 26 0.0 0.0 0.0 0.047875645557241955 0.0 27 0.0 0.0 0.0 0.13892183270105468 0.0 28 0.0 0.0 0.0 0.2372439538201321 0.0 29 0.0 0.0 0.0 0.3485172374151808 0.0 30 0.0 0.0 0.0 0.5728100287593417 0.0 31 0.0 0.0 0.0 0.892757098764983 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6925 0.0 31.97762 1 GTATTGG 435 0.0 22.965515 1 ATCACGT 45 0.003826823 20.555555 23 CTAACGC 65 6.905526E-5 19.923077 3 TCTAACG 65 6.905526E-5 19.923077 2 ATTGGAC 485 0.0 19.835052 3 CAATGCG 75 9.2716255E-6 19.733334 19 CACGGCT 295 0.0 19.440676 4 ATCCACG 315 0.0 18.793652 1 TATTGGA 555 0.0 18.666666 2 CGTGACT 50 0.0070367297 18.5 12 AATGCGT 50 0.0070367297 18.5 35 TCTGTCG 60 9.2402095E-4 18.5 8 TCCACGG 325 0.0 18.215384 2 ACGGCTC 305 0.0 18.196722 5 GTATCAA 12355 0.0 17.95346 2 TTTTTAC 1650 0.0 17.715153 1 CGTCTGT 1045 0.0 17.526316 34 CTCTCGA 95 3.6091988E-6 17.526316 1 CGACGAG 75 2.0682698E-4 17.266666 24 >>END_MODULE