##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088169_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1199645 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.738506808264113 31.0 30.0 33.0 28.0 34.0 2 30.87001404582189 31.0 31.0 34.0 27.0 34.0 3 30.92554464028942 31.0 31.0 34.0 27.0 34.0 4 34.90440088526189 35.0 35.0 37.0 32.0 37.0 5 34.75838268821193 35.0 35.0 37.0 32.0 37.0 6 34.858204718896005 35.0 35.0 37.0 32.0 37.0 7 34.68388648308458 35.0 35.0 37.0 31.0 37.0 8 34.76605245718525 35.0 35.0 37.0 32.0 37.0 9 36.19578375269351 38.0 35.0 39.0 32.0 39.0 10 35.99258447290657 37.0 35.0 39.0 30.0 39.0 11 36.059662650200686 38.0 35.0 39.0 31.0 39.0 12 35.8662604353788 37.0 35.0 39.0 30.0 39.0 13 35.93014100004585 37.0 35.0 39.0 30.0 39.0 14 36.75182241413085 38.0 36.0 40.0 31.0 41.0 15 36.811174139016124 38.0 36.0 40.0 31.0 41.0 16 36.76314826469497 38.0 36.0 40.0 31.0 41.0 17 36.87557068966236 38.0 36.0 40.0 31.0 41.0 18 36.88118318335841 38.0 36.0 40.0 31.0 41.0 19 36.991307428447584 39.0 36.0 40.0 31.0 41.0 20 36.95840186055041 39.0 36.0 40.0 31.0 41.0 21 36.84820509400698 39.0 36.0 40.0 31.0 41.0 22 36.79282037602791 39.0 35.0 40.0 30.0 41.0 23 36.66281608309125 38.0 35.0 40.0 30.0 41.0 24 36.5791921776859 38.0 35.0 40.0 30.0 41.0 25 36.47528727248478 38.0 35.0 40.0 30.0 41.0 26 36.188539109486555 38.0 35.0 40.0 30.0 41.0 27 35.99837868702824 38.0 34.0 40.0 29.0 41.0 28 35.835988146493335 38.0 34.0 40.0 29.0 41.0 29 35.68590708084475 38.0 34.0 40.0 28.0 41.0 30 35.466560524155064 38.0 34.0 40.0 27.0 41.0 31 35.19699827865744 37.0 34.0 40.0 27.0 41.0 32 34.9302060192807 37.0 33.0 40.0 26.0 41.0 33 35.09880506316452 37.0 33.0 40.0 27.0 41.0 34 35.05391428297538 37.0 33.0 40.0 26.0 41.0 35 34.94847975859525 37.0 33.0 40.0 26.0 41.0 36 34.84451316847901 37.0 33.0 40.0 25.0 41.0 37 34.69870503357243 37.0 33.0 40.0 25.0 41.0 38 34.578094352912736 37.0 33.0 40.0 24.0 41.0 39 34.50815532928491 37.0 33.0 40.0 24.0 41.0 40 34.338740210645646 37.0 33.0 40.0 23.0 41.0 41 34.18131697293783 37.0 33.0 40.0 23.0 41.0 42 33.9339621304636 37.0 33.0 40.0 21.0 41.0 43 33.60294337074718 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 7.0 16 19.0 17 46.0 18 132.0 19 294.0 20 640.0 21 1297.0 22 2248.0 23 3823.0 24 6132.0 25 9676.0 26 14040.0 27 19791.0 28 26911.0 29 35509.0 30 44488.0 31 53478.0 32 64495.0 33 77143.0 34 92047.0 35 109770.0 36 136693.0 37 172606.0 38 201924.0 39 126433.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.95940465721109 23.99451504403386 14.667755877780511 21.378324420974536 2 19.021627231389285 24.15347873745983 34.925415435399636 21.899478595751244 3 21.196353921368406 26.278857495342372 32.15801341230114 20.366775170988085 4 14.131847338170875 16.961934572310973 34.78178961276044 34.12442847675771 5 10.957324875275603 41.42208736751289 34.50270705083587 13.117880706375637 6 31.712881727511053 36.66334623992931 14.901991839252446 16.721780193307186 7 24.196824894031153 36.0036510801112 21.16000983624322 18.639514189614427 8 27.797556777213263 34.24379712331565 19.89105110261786 18.067594996853238 9 25.223962088784596 13.567013574849227 23.812961334394757 37.39606300197142 10 16.602244830762434 28.19884215747159 33.40071437800349 21.79819863376249 11 31.849588836697524 21.757770006960392 24.889279745257973 21.503361411084114 12 19.994831804408804 28.0357939223687 31.599098066511345 20.370276206711154 13 31.43171521575133 20.733466983982762 29.13095123974176 18.703866560524155 14 20.791484147393604 22.558256817641887 28.925640501981835 27.724618532982674 15 23.314063743857556 29.12244872441431 27.06609038507225 20.497397146655885 16 21.652572219281538 28.34505207790638 27.613585685765372 22.38879001704671 17 19.290540118118276 27.44595276102514 28.449583001637986 24.8139241192186 18 20.283500535575108 26.159238774804212 32.91740473223329 20.639855957387393 19 19.654731191310763 24.74623742857262 34.53696718612589 21.06206419399072 20 23.939915558352677 23.69150873800166 33.418386272605645 18.950189431040016 21 23.54238128779764 24.345035406307698 32.042562591433295 20.07002071446136 22 21.746933467817563 24.20282666955641 32.75994148268863 21.290298379937397 23 20.827911590512194 26.19083145430523 33.7285613660708 19.25269558911178 24 19.44000100029592 25.29631682706134 32.32606312700841 22.93761904563433 25 20.531073775992066 26.287610084650044 33.426972145926506 19.75434399343139 26 21.945992356072004 25.21379241358902 31.984378712035642 20.85583651830333 27 20.92085575316031 26.713569430956657 31.453971799990832 20.9116030158922 28 20.533991305761287 26.192581972166767 31.830416498214053 21.443010223857893 29 19.71199813278095 25.920001333727893 32.670164923789955 21.6978356097012 30 18.978947938765216 26.166324204243757 34.71677037790346 20.13795747908756 31 20.3800290919397 25.683598064427393 33.3066865614411 20.629686282191813 32 21.348648975321865 26.114058742377956 31.301676746037373 21.235615536262813 33 22.35419644978306 26.034285142688045 30.710668572786116 20.900849834742775 34 20.73946875950802 28.610047138945273 30.962826502840425 19.687657598706284 35 19.290956908085306 29.453546674224455 31.099366896040078 20.156129521650154 36 20.472556464620784 25.803633574932583 33.1970708001117 20.526739160334934 37 20.354771619937566 26.201667993448062 32.37849530486102 21.06506508175335 38 20.89251403540214 25.723443185275645 32.70675908289536 20.67728369642686 39 21.64190239612552 25.4055157984237 32.53737564029359 20.415206165157194 40 19.741173430473182 26.404978139366232 31.655114638080434 22.19873379208016 41 20.630186430152254 25.921835209582834 31.63794289143872 21.810035468826193 42 18.37860367025245 27.645761871220238 31.75022610855712 22.2254083499702 43 19.05363670085734 27.293407633091455 31.39061972500198 22.262335941049226 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 61.0 1 101.0 2 141.0 3 370.5 4 600.0 5 600.0 6 1194.5 7 1789.0 8 2034.0 9 2279.0 10 3535.5 11 4792.0 12 4792.0 13 9260.5 14 13729.0 15 23760.0 16 33791.0 17 32513.5 18 31236.0 19 31236.0 20 34091.0 21 36946.0 22 29381.0 23 21816.0 24 23501.0 25 25186.0 26 25186.0 27 27232.0 28 29278.0 29 31080.0 30 32882.0 31 35298.0 32 37714.0 33 37714.0 34 41546.5 35 45379.0 36 49768.5 37 54158.0 38 55564.5 39 56971.0 40 56971.0 41 59677.0 42 62383.0 43 71460.0 44 80537.0 45 100282.5 46 120028.0 47 120028.0 48 121568.0 49 123108.0 50 110819.5 51 98531.0 52 90550.5 53 82570.0 54 82570.0 55 71754.0 56 60938.0 57 50907.5 58 40877.0 59 35767.0 60 30657.0 61 30657.0 62 26901.5 63 23146.0 64 19834.0 65 16522.0 66 13973.0 67 11424.0 68 11424.0 69 9647.5 70 7871.0 71 6542.5 72 5214.0 73 4104.5 74 2995.0 75 2995.0 76 2404.5 77 1814.0 78 1422.0 79 1030.0 80 798.0 81 566.0 82 566.0 83 439.0 84 312.0 85 234.5 86 157.0 87 138.0 88 119.0 89 119.0 90 99.0 91 79.0 92 45.5 93 12.0 94 9.5 95 7.0 96 7.0 97 3.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1199645.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.984188713328116 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21899792013389 39.294625325139144 2 11.285956264508249 11.056668229420794 3 3.4893822628541584 5.12773677769764 4 1.5021492863781793 2.943262564781596 5 0.7591638809098131 1.8593513403414414 6 0.4881183662144978 1.4346049299055414 7 0.32632205497055233 1.1189234785398998 8 0.2641201452927066 1.0350168832007667 9 0.197294024288266 0.8697858945973527 >10 1.2785740695295884 12.09740074506778 >50 0.11485622186833495 3.9026655809513247 >100 0.06118352788394946 5.652960599823096 >500 0.0073694436076553235 2.6230265886264212 >1k 0.00565561951285176 5.8227076703645375 >5k 3.4276481896071274E-4 1.1039462198891803 >10k+ 5.141472284410691E-4 4.057317171653542 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17781 1.4821884807588912 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16950 1.412917988238187 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13599 1.1335853523333987 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7870 0.656027408108232 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5280 0.4401302051857008 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4675 0.3896986191748392 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4577 0.38152953582101373 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4445 0.3705262806913712 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4289 0.3575224337199755 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3837 0.3198446207002905 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3365 0.2804996478124779 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3232 0.26941303468942895 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3209 0.26749580084108215 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2763 0.23031813578183544 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2394 0.19955903621488025 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2177 0.1814703516456952 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2128 0.17738580996878242 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1984 0.1653822589182633 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1919 0.15996398934684844 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1769 0.14746029033589103 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1718 0.1432090326721655 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1651 0.1376240471139379 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1594 0.13287264148977407 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1442 0.12020222649200389 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1407 0.1172846967227805 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1387 0.11561753685465283 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1254 0.10453092373160393 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1216 0.10136331998216137 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.6671598681276543E-4 0.0 11 0.0 0.0 0.0 2.5007398021914816E-4 0.0 12 0.0 0.0 0.0 7.502219406574445E-4 0.0 13 0.0 0.0 0.0 8.335799340638272E-4 0.0 14 0.0 0.0 0.0 9.1693792747021E-4 0.0 15 0.0 0.0 0.0 0.0013337278945021235 0.0 16 0.0 0.0 0.0 0.002334023815378716 0.0 17 0.0 0.0 0.0 0.004001183683506371 0.0 18 8.335799340638272E-5 0.0 0.0 0.004501331643944667 0.0 19 8.335799340638272E-5 0.0 0.0 0.005584985558227643 0.0 20 8.335799340638272E-5 0.0 0.0 0.007668935393387211 0.0 21 8.335799340638272E-5 0.0 0.0 0.009752885228546778 0.0 22 8.335799340638272E-5 0.0 0.0 0.017588536608746753 0.0 23 8.335799340638272E-5 0.0 0.0 0.028091643777950977 0.0 24 8.335799340638272E-5 0.0 0.0 0.04526339041966582 0.0 25 8.335799340638272E-5 0.0 0.0 0.05168195591195729 0.0 26 8.335799340638272E-5 0.0 0.0 0.059350891305344496 0.0 27 8.335799340638272E-5 0.0 0.0 0.11161635317114646 0.0 28 8.335799340638272E-5 0.0 0.0 0.17455163819296543 0.0 29 8.335799340638272E-5 0.0 0.0 0.24590608054882904 0.0 30 8.335799340638272E-5 0.0 0.0 0.3989513564429477 0.0 31 8.335799340638272E-5 0.0 0.0 0.6268521104159981 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3825 0.0 31.389542 1 GTATTGG 305 0.0 24.868853 1 CGTCTGT 225 0.0 22.2 34 CTTAACC 60 3.7264617E-5 21.583332 3 ATTGGAC 385 0.0 20.662336 3 CACCTAG 45 0.0038259046 20.555555 7 CGAATTA 45 0.0038259046 20.555555 15 CTAAACG 125 4.129106E-10 19.240002 26 GGACCCT 590 0.0 19.12712 6 GTATCAA 6405 0.0 18.80328 2 CGTCTAA 50 0.007035056 18.5 1 AGTGCGC 60 9.237138E-4 18.5 8 CCTAGTT 155 2.0008883E-11 17.903225 9 GTTAACG 135 1.1514203E-9 17.814816 13 TTGGACC 670 0.0 17.671642 4 ATCTGCG 75 2.0673608E-4 17.266666 36 TAATACT 205 0.0 17.146341 4 GTCATAG 100 5.878219E-6 16.650002 1 AAGTGTG 135 2.219349E-8 16.444445 7 TATTGGA 435 0.0 16.16092 2 >>END_MODULE