##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088167_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1649160 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.091482936767807 31.0 31.0 33.0 30.0 34.0 2 31.22198391908608 31.0 31.0 34.0 28.0 34.0 3 31.245046569162483 31.0 31.0 34.0 28.0 34.0 4 35.213364985810955 37.0 35.0 37.0 33.0 37.0 5 35.10396262339615 35.0 35.0 37.0 32.0 37.0 6 35.172783720196946 37.0 35.0 37.0 32.0 37.0 7 34.99957069053336 37.0 35.0 37.0 32.0 37.0 8 35.07557059351427 37.0 35.0 37.0 32.0 37.0 9 36.52528984452691 39.0 35.0 39.0 32.0 39.0 10 36.40028014261806 38.0 35.0 39.0 32.0 39.0 11 36.44306434791045 38.0 35.0 39.0 32.0 39.0 12 36.28293919328628 38.0 35.0 39.0 32.0 39.0 13 36.34422251327949 38.0 35.0 39.0 32.0 39.0 14 37.2354750297121 39.0 36.0 41.0 32.0 41.0 15 37.29665708603168 39.0 36.0 41.0 32.0 41.0 16 37.26821290838973 39.0 36.0 41.0 32.0 41.0 17 37.416895267893956 39.0 36.0 41.0 32.0 41.0 18 37.44423585340416 39.0 36.0 41.0 32.0 41.0 19 37.55902883892406 39.0 36.0 41.0 32.0 41.0 20 37.526805767784815 39.0 36.0 41.0 32.0 41.0 21 37.41539086565282 39.0 36.0 41.0 32.0 41.0 22 37.374636784787405 39.0 36.0 41.0 32.0 41.0 23 37.2708172645468 39.0 36.0 41.0 31.0 41.0 24 37.1938411069878 39.0 36.0 41.0 31.0 41.0 25 37.102412137087974 39.0 36.0 40.0 31.0 41.0 26 36.80766208251473 39.0 35.0 40.0 31.0 41.0 27 36.61825232239443 38.0 35.0 40.0 30.0 41.0 28 36.44281088554173 38.0 35.0 40.0 30.0 41.0 29 36.27984489073225 38.0 35.0 40.0 30.0 41.0 30 36.08354010526571 38.0 35.0 40.0 30.0 41.0 31 35.75634808023479 38.0 34.0 40.0 29.0 41.0 32 35.45335382861578 38.0 34.0 40.0 28.0 41.0 33 35.51067270610493 38.0 34.0 40.0 28.0 41.0 34 35.43817337311116 38.0 34.0 40.0 27.0 41.0 35 35.3190333260569 38.0 34.0 40.0 27.0 41.0 36 35.18312838050886 38.0 34.0 40.0 26.0 41.0 37 35.000858012563974 38.0 34.0 40.0 25.0 41.0 38 34.822533289674745 38.0 33.0 40.0 24.0 41.0 39 34.67151216376822 38.0 33.0 40.0 24.0 41.0 40 34.42725266196124 38.0 33.0 40.0 22.0 41.0 41 34.2258434597007 38.0 33.0 40.0 21.0 41.0 42 33.94636966698198 38.0 33.0 40.0 18.0 41.0 43 33.58628453273182 37.0 33.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 7.0 16 17.0 17 43.0 18 143.0 19 318.0 20 701.0 21 1330.0 22 2463.0 23 4147.0 24 6794.0 25 10675.0 26 16042.0 27 23300.0 28 32860.0 29 43379.0 30 54778.0 31 66019.0 32 79730.0 33 97264.0 34 117560.0 35 140181.0 36 174546.0 37 229154.0 38 266894.0 39 280814.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.06003056101288 23.68902956656722 15.329561716267676 20.921378156152223 2 17.172075480850857 23.76779693904776 36.71323582914939 22.346891750952 3 20.23933396395741 26.081095830604674 33.18228673991608 20.497283465521843 4 12.981093405127458 15.815991171262947 34.493014625627595 36.709900797982 5 10.280930898154212 41.95899730772029 34.146777753523004 13.613294040602488 6 31.03719469305586 35.49734410245215 15.372250115210168 18.093211089281816 7 23.117162676756653 37.27685609643697 20.92719930146256 18.678781925343813 8 28.140871716510222 33.47752795362487 20.21344199471246 18.16815833515244 9 24.812207426811224 13.906655509471488 25.665672221009483 35.6154648427078 10 16.538844017560457 28.810060879478037 33.19593004923719 21.455165053724322 11 29.983931213466246 22.12550631836814 25.94029687841083 21.950265589754782 12 19.928872880739284 28.814911833903324 31.906182541415024 19.35003274394237 13 31.124390598850322 21.600329864900917 30.32465012491208 16.95062941133668 14 20.264134468456668 23.722379878241043 30.174452448519247 25.83903320478304 15 22.38763976812438 29.633085934657643 28.55417303354435 19.42510126367363 16 20.59224089839676 28.79653884401756 28.933699580392442 21.677520677193236 17 17.877949986659875 27.879344636057148 29.266656964757814 24.976048412525166 18 18.821096800795555 26.91679400422033 35.01182420141163 19.250284993572485 19 18.082538989546194 25.291966819471728 36.823049309951735 19.802444881030343 20 23.477527953624875 23.686179630842368 35.247156127968175 17.58913628756458 21 22.61587717383395 24.974956947779475 33.5763055131097 18.83286036527687 22 20.258373960076646 24.73277304809721 34.602403647917725 20.406449343908413 23 19.215843217152976 27.23774527638313 35.768209270173905 17.77820223628999 24 17.492238472919546 26.190545489825123 33.90883843896287 22.408377598292464 25 18.8813699095297 27.3499235974678 35.59533338184288 18.17337311115962 26 20.693565208954862 25.843277789905162 33.775982924640424 19.68717407649955 27 19.1826748162701 27.621213223701762 33.0833272696403 20.112784690387834 28 18.751424967862427 27.147214339421282 33.24601615367824 20.855344539038057 29 17.504790317494965 27.027395765116786 34.53067015935385 20.937143758034395 30 16.902604962526375 27.006779208809334 37.259999029809116 18.830616798855175 31 18.617963084236823 26.47080938174586 35.451320672342284 19.459906861675037 32 20.135584176186665 26.862948410099683 33.071745615949936 19.929721797763712 33 21.24329961920008 26.73227582526862 32.21561279681777 19.808811758713528 34 18.959773460428337 30.06603361711417 32.40643721652235 18.567755705935145 35 17.19960464721434 30.832363142448276 32.589924567658684 19.378107642678696 36 18.423621722573916 26.432608115646754 35.329561716267676 19.814208445511657 37 18.479043876882777 26.694680928472675 34.38144267384608 20.444832520798467 38 19.035933444905282 26.359358703824974 34.854895825753715 19.749812025516018 39 20.398142084455117 25.630320890635232 34.48682965873536 19.484707366174295 40 18.191564190254432 26.569465667370057 33.577033156273494 21.661936986102013 41 19.075408086541028 26.12032792451915 33.3513425016372 21.452921487302625 42 16.23650828300468 27.94865264740838 33.819277692886075 21.995561376700863 43 16.92091731548182 27.731693710737588 33.54434985083315 21.80303912294744 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 173.0 1 237.5 2 302.0 3 932.0 4 1562.0 5 1562.0 6 2853.0 7 4144.0 8 4672.5 9 5201.0 10 7764.5 11 10328.0 12 10328.0 13 18765.5 14 27203.0 15 44519.5 16 61836.0 17 59483.5 18 57131.0 19 57131.0 20 60414.5 21 63698.0 22 50330.0 23 36962.0 24 38854.0 25 40746.0 26 40746.0 27 43022.0 28 45298.0 29 45663.0 30 46028.0 31 48875.0 32 51722.0 33 51722.0 34 55358.5 35 58995.0 36 63278.0 37 67561.0 38 69475.5 39 71390.0 40 71390.0 41 74796.0 42 78202.0 43 92220.5 44 106239.0 45 142953.0 46 179667.0 47 179667.0 48 179656.5 49 179646.0 50 159010.0 51 138374.0 52 124231.0 53 110088.0 54 110088.0 55 93137.5 56 76187.0 57 58914.0 58 41641.0 59 35409.5 60 29178.0 61 29178.0 62 24933.5 63 20689.0 64 17401.5 65 14114.0 66 11776.0 67 9438.0 68 9438.0 69 7741.5 70 6045.0 71 5022.5 72 4000.0 73 3161.5 74 2323.0 75 2323.0 76 1816.5 77 1310.0 78 1023.5 79 737.0 80 617.0 81 497.0 82 497.0 83 368.0 84 239.0 85 187.0 86 135.0 87 100.5 88 66.0 89 66.0 90 58.0 91 50.0 92 30.5 93 11.0 94 7.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1649160.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.333805877094896 #Duplication Level Percentage of deduplicated Percentage of total 1 71.29055713510809 25.902572638169595 2 13.790872819203972 10.02149791777323 3 5.64094644755859 6.148711595660455 4 2.922300951622166 4.247132619627577 5 1.6952442406292383 3.0797337576642945 6 1.0086145028581022 2.198808213100132 7 0.6446356830713249 1.639544743911339 8 0.47193110156601903 1.371764242533063 9 0.35060527107605427 1.146494147288723 >10 1.8897013809673882 12.834730534825958 >50 0.1700463122949914 4.310839850322967 >100 0.09909605446993985 7.182576294001652 >500 0.012302723635177374 3.1015395510663657 >1k 0.01095447994913054 7.518069168649685 >5k 0.00151677414680269 3.583324968684777 >10k+ 6.741218430234177E-4 5.712659756720193 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28882 1.751315821387858 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28866 1.7503456305028013 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23879 1.4479492590167116 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11666 0.7073904290669188 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9688 0.5874505809017925 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 7885 0.4781221955419729 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6812 0.4130587693128623 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6756 0.4096631012151641 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5864 0.35557495937325667 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5662 0.34332629944941667 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5612 0.34029445293361466 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5123 0.31064299400907125 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5117 0.310279172427175 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4410 0.267408862693735 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4306 0.26110262194086686 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3975 0.24103179800625774 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3581 0.21714084746173812 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3452 0.20931868345096896 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3410 0.2067719323776953 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3116 0.18894467486477964 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3037 0.18415435736981253 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2904 0.17608964563777924 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2719 0.16487181352931188 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2386 0.14467971573407068 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2320 0.14067767833321204 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2310 0.14007130903005166 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2308 0.1399500351694196 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2256 0.1367969147929855 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2253 0.13661500400203738 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2223 0.1347958960925562 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2106 0.12770137524557956 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2105 0.12764073831526354 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2031 0.12315360547187658 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2008 0.12175895607460768 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 1951 0.11830265104659343 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 1925 0.11672609085837639 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1887 0.11442188750636687 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1876 0.11375488127289045 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 1854 0.11242086880593757 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 1759 0.10666036042591379 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1743 0.10569016954085717 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1706 0.10344660311916369 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.063693031603968E-5 0.0 5 0.0 0.0 0.0 6.063693031603968E-5 0.0 6 1.8191079094811904E-4 0.0 0.0 6.063693031603968E-5 0.0 7 1.8191079094811904E-4 0.0 0.0 1.2127386063207936E-4 0.0 8 1.8191079094811904E-4 0.0 0.0 1.2127386063207936E-4 0.0 9 1.8191079094811904E-4 0.0 0.0 1.2127386063207936E-4 0.0 10 1.8191079094811904E-4 0.0 0.0 3.638215818962381E-4 0.0 11 1.8191079094811904E-4 0.0 0.0 7.276431637924761E-4 0.0 12 2.4254772126415872E-4 0.0 0.0 9.095539547405952E-4 0.0 13 3.031846515801984E-4 0.0 0.0 9.095539547405952E-4 0.0 14 3.638215818962381E-4 0.0 0.0 0.0010914647456887142 0.0 15 3.638215818962381E-4 0.0 0.0 0.0017584709791651507 0.0 16 4.2445851221227775E-4 0.0 0.0 0.0031531203764340633 0.0 17 4.2445851221227775E-4 0.0 0.0 0.004608406704019016 0.0 18 4.2445851221227775E-4 0.0 0.0 0.005275412937495452 0.0 19 4.2445851221227775E-4 0.0 0.0 0.006427514613500206 0.0 20 4.2445851221227775E-4 0.0 0.0 0.008125348662349317 0.0 21 4.2445851221227775E-4 0.0 0.0 0.011642290620679618 0.0 22 4.2445851221227775E-4 0.0 0.0 0.019403817701132697 0.0 23 4.2445851221227775E-4 0.0 0.0 0.03189502534623687 0.0 24 4.2445851221227775E-4 0.0 0.0 0.050692473744209175 0.0 25 4.2445851221227775E-4 0.0 0.0 0.06087947803730384 0.0 26 4.2445851221227775E-4 0.0 0.0 0.07470469814936088 0.0 27 4.2445851221227775E-4 0.0 0.0 0.18530645904581727 0.0 28 4.2445851221227775E-4 0.0 0.0 0.2993645249702879 0.0 29 4.2445851221227775E-4 0.0 0.0 0.4300371098013534 0.0 30 4.2445851221227775E-4 0.0 0.0 0.7032671178054282 0.0 31 4.2445851221227775E-4 0.0 0.0 1.0806713720924592 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5635 0.0 30.860691 1 ATTGGAC 360 0.0 25.694445 3 TCCGACG 45 1.3235532E-4 24.666666 23 GTATTGG 365 0.0 24.328768 1 GAACCGT 55 1.9033101E-5 23.545454 6 AACCGTG 50 2.702794E-4 22.199999 7 CGTCTGT 570 0.0 21.421053 34 GCGCGCT 80 6.963892E-7 20.8125 23 GGATCGT 45 0.003826503 20.555555 12 AACGGTA 45 0.003826503 20.555555 18 GGACCCT 825 0.0 19.733334 6 TATTGGA 500 0.0 19.24 2 TTGGACC 905 0.0 19.01105 4 CTAAACG 80 1.6173653E-5 18.5 26 CGGGATA 90 2.1533706E-6 18.5 24 CTGTGCG 60 9.2391396E-4 18.5 9 TCGCACG 50 0.00703615 18.499998 22 GACCCTC 845 0.0 18.390533 7 ACGATCT 215 0.0 18.069769 32 TATACCG 95 3.608311E-6 17.526316 5 >>END_MODULE