##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088166_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1023687 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.78525174198754 31.0 31.0 33.0 28.0 34.0 2 30.925772233114223 31.0 31.0 34.0 28.0 34.0 3 30.969629388670562 31.0 31.0 34.0 27.0 34.0 4 34.96117954023056 35.0 35.0 37.0 32.0 37.0 5 34.81435634134262 35.0 35.0 37.0 32.0 37.0 6 34.8963579687932 35.0 35.0 37.0 32.0 37.0 7 34.71904791210595 35.0 35.0 37.0 31.0 37.0 8 34.805812714237845 35.0 35.0 37.0 32.0 37.0 9 36.22259538315911 38.0 35.0 39.0 32.0 39.0 10 36.04211345850831 38.0 35.0 39.0 30.0 39.0 11 36.10807795742253 38.0 35.0 39.0 31.0 39.0 12 35.916643466215746 37.0 35.0 39.0 30.0 39.0 13 35.985088215440854 37.0 35.0 39.0 30.0 39.0 14 36.79718996138468 38.0 36.0 40.0 31.0 41.0 15 36.864106899862946 38.0 36.0 40.0 31.0 41.0 16 36.81830969817923 38.0 36.0 40.0 31.0 41.0 17 36.95269354793018 38.0 36.0 40.0 31.0 41.0 18 36.98061712222584 38.0 36.0 40.0 31.0 41.0 19 37.092784220176675 39.0 36.0 40.0 31.0 41.0 20 37.06961600567361 39.0 36.0 40.0 31.0 41.0 21 36.954702951195046 39.0 36.0 40.0 31.0 41.0 22 36.90749223151217 39.0 36.0 40.0 31.0 41.0 23 36.77605850225704 39.0 35.0 40.0 31.0 41.0 24 36.70561704896125 38.0 35.0 40.0 30.0 41.0 25 36.60325763636737 38.0 35.0 40.0 30.0 41.0 26 36.310546094655884 38.0 35.0 40.0 30.0 41.0 27 36.11768636311685 38.0 35.0 40.0 30.0 41.0 28 35.94486889058863 38.0 34.0 40.0 29.0 41.0 29 35.793256141769895 38.0 34.0 40.0 29.0 41.0 30 35.5820157919364 38.0 34.0 40.0 28.0 41.0 31 35.29184408906238 38.0 34.0 40.0 27.0 41.0 32 35.00631052264999 37.0 33.0 40.0 27.0 41.0 33 35.141757197268305 37.0 33.0 40.0 27.0 41.0 34 35.085807478262396 37.0 33.0 40.0 26.0 41.0 35 34.98532461582496 37.0 33.0 40.0 26.0 41.0 36 34.86374253067588 37.0 33.0 40.0 25.0 41.0 37 34.704945945391515 37.0 33.0 40.0 25.0 41.0 38 34.56460617356672 37.0 33.0 40.0 24.0 41.0 39 34.467475898394724 37.0 33.0 40.0 24.0 41.0 40 34.270043480087175 37.0 33.0 40.0 23.0 41.0 41 34.09040849400256 37.0 33.0 40.0 21.0 41.0 42 33.82033082377719 37.0 33.0 40.0 20.0 41.0 43 33.48151632286041 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 11.0 16 17.0 17 52.0 18 104.0 19 261.0 20 510.0 21 990.0 22 1798.0 23 3078.0 24 5204.0 25 7913.0 26 11926.0 27 16698.0 28 22840.0 29 29605.0 30 37957.0 31 45308.0 32 54591.0 33 65452.0 34 78244.0 35 92513.0 36 114683.0 37 144591.0 38 168927.0 39 120411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.23552804714722 24.35764056786889 15.236786244232855 21.170045140751032 2 18.137575254936323 24.392319136611093 35.53322451100776 21.936881097444825 3 20.778421529236965 25.99339446530043 33.074172085803575 20.154011919659037 4 13.749417546574294 16.707645989447947 34.74655827415997 34.79637818981779 5 10.723981060617161 41.65589677313476 34.37290890672637 13.24721325952171 6 31.511585084112625 36.488203913891645 14.870365648875094 17.129845353120633 7 23.51001819892213 36.68992572925123 21.131068383206976 18.668987688619666 8 27.812114445138015 34.06451386019359 20.078500557299254 18.044871137369135 9 24.869711151943903 13.878070152302413 24.802307736642156 36.44991095911153 10 16.435004058857835 28.866733679337532 33.63616027164553 21.062101990159103 11 31.042301015837847 22.021770326281374 25.384419260965508 21.551509396915268 12 19.959421190266166 28.489079181429478 31.792432647869905 19.75906698043445 13 31.22966297315488 21.24975700580353 29.589024770266693 17.931555250774895 14 20.586956755336345 23.269710370455034 29.62741541115595 26.515917463052673 15 22.8061897826191 29.72461308974325 27.535662756291718 19.933534371345928 16 21.047058329352623 28.668430877797608 28.203933428870346 22.08057736397942 17 18.674653482949378 27.966165439240704 28.877479151342158 24.481701926467757 18 19.46249195310676 26.653654876930155 34.010981872388726 19.872871297574356 19 18.91515668363474 25.27403395764526 35.64976403920339 20.16104531951661 20 23.571072017130238 24.047780229699118 34.21455972382183 18.166588029348816 21 23.10598845154818 24.82145421403222 32.63692906132441 19.435628273095194 22 20.879917396626116 24.86629213812425 33.51639710184852 20.737393363401118 23 20.16104531951661 27.024178288871504 34.403093914448455 18.41168247716343 24 18.512006111242986 25.979718410021814 32.90361213925741 22.60466333947779 25 19.72849122827583 27.02339679999844 34.290266458399884 18.95784551332585 26 21.269294227630127 25.830454035266637 32.70560239604489 20.19464934105835 27 19.953462337609054 27.272203319960102 32.32081681217013 20.453517530260715 28 19.733473219841613 27.00444569482664 32.399747188349565 20.862333896982182 29 18.619265459070984 26.826461603986374 33.26348776530326 21.290785171639378 30 17.95773512802253 26.9986822143878 35.72400548214444 19.31957717544523 31 19.678573626508882 26.223933682854234 34.16581435536448 19.9316783352724 32 20.6265196295352 26.744502958423816 32.04905405656221 20.579923355478773 33 21.754305759475308 26.764528610796074 31.29648027180183 20.18468535792679 34 19.864861036625452 29.632690461049126 31.46733327667539 19.035115225650028 35 18.40572362450632 30.50072922680468 31.55124564442061 19.542301504268394 36 19.51573088258423 26.5894751032298 33.9557892207286 19.939004793457375 37 19.335988441779566 26.958533223534147 33.23193515205332 20.473543182632973 38 20.03913305531867 26.450077025497055 33.53476209036551 19.976027828818772 39 21.079685489803033 26.024947078550376 33.28566251207645 19.60970491957014 40 19.089526388437093 26.894060391506386 32.43042062661732 21.585992593439205 41 19.925524110397024 26.460138694737743 32.353248600402274 21.261088594462958 42 17.390569578396523 28.160756168633576 32.61426588400556 21.834408368964343 43 17.921982012079866 27.912242706999308 32.43735634036576 21.728418940555073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 135.5 2 185.0 3 405.0 4 625.0 5 625.0 6 1247.5 7 1870.0 8 2161.5 9 2453.0 10 3742.0 11 5031.0 12 5031.0 13 9389.5 14 13748.0 15 23509.5 16 33271.0 17 31945.5 18 30620.0 19 30620.0 20 33463.5 21 36307.0 22 29470.5 23 22634.0 24 24137.5 25 25641.0 26 25641.0 27 27313.0 28 28985.0 29 29690.5 30 30396.0 31 32083.0 32 33770.0 33 33770.0 34 36072.5 35 38375.0 36 41298.0 37 44221.0 38 45586.0 39 46951.0 40 46951.0 41 48889.0 42 50827.0 43 57922.0 44 65017.0 45 83823.0 46 102629.0 47 102629.0 48 104503.5 49 106378.0 50 95553.5 51 84729.0 52 77228.5 53 69728.0 54 69728.0 55 59684.5 56 49641.0 57 39675.5 58 29710.0 59 25544.5 60 21379.0 61 21379.0 62 18555.0 63 15731.0 64 13457.5 65 11184.0 66 9466.5 67 7749.0 68 7749.0 69 6580.5 70 5412.0 71 4438.5 72 3465.0 73 2823.5 74 2182.0 75 2182.0 76 1701.5 77 1221.0 78 986.5 79 752.0 80 578.5 81 405.0 82 405.0 83 285.0 84 165.0 85 129.0 86 93.0 87 80.5 88 68.0 89 68.0 90 55.5 91 43.0 92 25.5 93 8.0 94 4.5 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1023687.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.56462231992458 #Duplication Level Percentage of deduplicated Percentage of total 1 78.56089057003621 37.367190890806974 2 12.139637313554086 11.54834527840128 3 3.899268205841854 5.564016586048732 4 1.7599181901487433 3.3483937611356076 5 0.90875782084464 2.1612361264376494 6 0.5188381265974361 1.480700372207056 7 0.35976488585325306 1.1978456643706532 8 0.26076995993668894 0.9922739725416377 9 0.19539343146121496 0.8364433294122083 >10 1.2149090716737592 10.95136662255007 >50 0.09910021880037717 3.2338018879219805 >100 0.06537424219153719 6.070415348506504 >500 0.00972338409325903 3.376957587568085 >1k 0.006620176403921043 6.323898721447945 >5k 4.1376102524506516E-4 1.1299494136617612 >10k+ 6.206415378675977E-4 4.417164436981869 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16179 1.5804635596622798 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16116 1.5743093347869026 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12594 1.2302588584205914 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6442 0.629293915034576 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5041 0.4924356761392887 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4394 0.4292327635302588 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4320 0.42200399145441914 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4032 0.3938703920241246 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3575 0.34922784015035846 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3419 0.33398880712561557 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3022 0.29520742179982745 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2924 0.28563418310479666 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2778 0.27137201117138343 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2377 0.23219988140906353 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2297 0.22438499267842613 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2288 0.2235058176962294 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2008 0.19615370713899852 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1985 0.1939069266289403 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1920 0.1875573295352974 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1743 0.17026688821876218 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1726 0.16860622436350176 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1560 0.15239033024742915 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1560 0.15239033024742915 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1555 0.15190189970176432 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1396 0.13636980834962248 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1316 0.1285549196189851 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1212 0.11839556426915648 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1149 0.11224133939377955 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1148 0.11214365328464657 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1145 0.11185059495724767 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1133 0.11067836164765207 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 1125 0.10989687277458832 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1049 0.10247272848048279 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1042 0.10178892571655203 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1037 0.1013004951708872 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.76861091329674E-5 0.0 10 0.0 0.0 0.0 2.930583273989022E-4 0.0 11 0.0 0.0 0.0 2.930583273989022E-4 0.0 12 0.0 0.0 0.0 4.88430545664837E-4 0.0 13 0.0 0.0 0.0 5.861166547978044E-4 0.0 14 0.0 0.0 0.0 8.791749821967066E-4 0.0 15 0.0 0.0 0.0 0.0013676055278615436 0.0 16 0.0 0.0 0.0 0.0026375249465901197 0.0 17 0.0 0.0 0.0 0.0038097582561857288 0.0 18 0.0 0.0 0.0 0.0038097582561857288 0.0 19 0.0 0.0 0.0 0.0047866193475154025 0.0 20 0.0 0.0 0.0 0.005763480438845076 0.0 21 0.0 0.0 0.0 0.008010260948903327 0.0 22 0.0 0.0 0.0 0.013969113606014338 0.0 23 0.0 0.0 0.0 0.023053921755380305 0.0 24 0.0 0.0 0.0 0.03585080205179904 0.0 25 0.0 0.0 0.0 0.042200399145441915 0.0 26 0.0 0.0 0.0 0.05187132394960569 0.0 27 0.0 0.0 0.0 0.1156603532134334 0.0 28 0.0 0.0 0.0 0.19009716837275456 0.0 29 0.0 0.0 0.0 0.27440028055450544 0.0 30 0.0 0.0 0.0 0.4513098241943094 0.0 31 0.0 0.0 0.0 0.7083219773231466 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3125 0.0 31.316801 1 TATACCG 40 5.939506E-5 27.75 5 GTATTGG 220 0.0 20.181818 1 ATTGGAC 255 0.0 19.588236 3 CGTCTGT 305 0.0 19.409836 34 TGTACCG 60 9.235871E-4 18.5 5 AGCCGTC 50 0.0070343697 18.499998 12 GTATCAA 5585 0.0 17.555954 2 ACCGGGC 65 0.0015797745 17.076923 8 TGTCCGT 65 0.0015797745 17.076923 10 TAATAGT 120 1.0408439E-7 16.958334 4 GGCGCCT 80 3.382114E-4 16.1875 19 TTGGACC 545 0.0 15.954128 4 TTTTTAC 755 0.0 15.437087 1 TGGACCC 565 0.0 15.38938 5 GTACACT 110 1.4514802E-5 15.136364 4 GGACCCT 555 0.0 15.000001 6 TGCGTCT 390 0.0 14.705129 32 GTTATCA 190 4.5474735E-10 14.605264 1 TCAGAAC 165 1.6438207E-8 14.575757 3 >>END_MODULE