##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088164_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2522738 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0698792343874 31.0 31.0 33.0 28.0 34.0 2 31.196449254738305 31.0 31.0 34.0 28.0 34.0 3 31.231613033140977 31.0 31.0 34.0 28.0 34.0 4 35.21168191068593 37.0 35.0 37.0 33.0 37.0 5 35.101215425462335 35.0 35.0 37.0 32.0 37.0 6 35.16224078758872 37.0 35.0 37.0 32.0 37.0 7 34.974864611386515 37.0 35.0 37.0 32.0 37.0 8 35.0539481309593 37.0 35.0 37.0 32.0 37.0 9 36.4830327207978 38.0 35.0 39.0 32.0 39.0 10 36.36505812335645 38.0 35.0 39.0 32.0 39.0 11 36.4088109823533 38.0 35.0 39.0 32.0 39.0 12 36.24747318191584 38.0 35.0 39.0 32.0 39.0 13 36.29018907234917 38.0 35.0 39.0 32.0 39.0 14 37.14276670823526 39.0 36.0 41.0 31.0 41.0 15 37.1978370326209 39.0 36.0 41.0 32.0 41.0 16 37.174128664966396 39.0 36.0 41.0 31.0 41.0 17 37.353214245791676 39.0 36.0 41.0 32.0 41.0 18 37.393545425644675 39.0 36.0 41.0 32.0 41.0 19 37.516676325484454 39.0 36.0 41.0 32.0 41.0 20 37.47793548121129 39.0 36.0 41.0 32.0 41.0 21 37.358016567713335 39.0 36.0 41.0 31.0 41.0 22 37.32292612233216 39.0 36.0 41.0 31.0 41.0 23 37.184582782675015 39.0 36.0 41.0 31.0 41.0 24 37.108554277138566 39.0 36.0 41.0 31.0 41.0 25 37.012551045728884 39.0 35.0 40.0 31.0 41.0 26 36.70297113691553 38.0 35.0 40.0 30.0 41.0 27 36.53412799902328 38.0 35.0 40.0 30.0 41.0 28 36.35357932532035 38.0 35.0 40.0 30.0 41.0 29 36.20139269317701 38.0 35.0 40.0 30.0 41.0 30 35.99573717127978 38.0 35.0 40.0 30.0 41.0 31 35.64980707469424 38.0 34.0 40.0 29.0 41.0 32 35.327336013490104 37.0 34.0 40.0 27.0 41.0 33 35.36031644982555 38.0 34.0 40.0 27.0 41.0 34 35.277446171580245 38.0 34.0 40.0 27.0 41.0 35 35.145473291320776 38.0 34.0 40.0 26.0 41.0 36 35.007464905194276 38.0 34.0 40.0 25.0 41.0 37 34.82830163100568 38.0 33.0 40.0 25.0 41.0 38 34.649769020802005 38.0 33.0 40.0 24.0 41.0 39 34.489292586071166 38.0 33.0 40.0 23.0 41.0 40 34.226891179345614 38.0 33.0 40.0 21.0 41.0 41 34.012551838518306 38.0 33.0 40.0 20.0 41.0 42 33.702721011852994 37.0 33.0 40.0 18.0 41.0 43 33.354052620605074 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 3.0 15 12.0 16 33.0 17 94.0 18 227.0 19 535.0 20 1145.0 21 2289.0 22 3987.0 23 6756.0 24 11048.0 25 17050.0 26 25913.0 27 37752.0 28 52191.0 29 69276.0 30 86568.0 31 103693.0 32 125417.0 33 151278.0 34 181678.0 35 214616.0 36 267918.0 37 354854.0 38 401790.0 39 406613.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.72309530359475 23.267219980830355 15.144497763937437 20.86518695163747 2 17.070302187543852 23.536728744721014 37.08098106105351 22.31198800668163 3 20.148901709174712 26.14643296291569 33.292597170217434 20.412068157692158 4 12.567535748856995 15.2925115489599 34.29171003885461 37.8482426633285 5 10.17553150584801 42.019028531698495 33.93095121253178 13.874488749921712 6 31.14504954537491 35.20151517914266 15.191232700343832 18.4622025751386 7 23.309475657004413 37.43321740109357 20.34991346703463 18.907393474867387 8 28.840252138747662 32.88062414725588 19.85703628359346 18.422087430402996 9 25.14874711523749 13.492086772387779 25.524489661629545 35.834676450745185 10 16.620275272342987 28.67483662591993 32.744581482500365 21.960306619236718 11 30.014531830098885 21.60914054491588 26.28889722198659 22.08743040299865 12 20.55821888757374 28.648397098707832 31.684820223106797 19.10856379061163 13 31.824470079730833 21.29896168369446 30.226325524093266 16.65024271248144 14 20.654423883891234 23.40361940082561 29.992413005234788 25.949543710048367 15 22.42428662825866 29.358696781037114 28.887343830393803 19.329672760310423 16 20.762600000475672 28.739448963784586 28.62663502908348 21.87131600665626 17 17.965282165647007 27.57222509828607 28.72533731207918 25.737155423987744 18 19.14701407756176 26.56526361437454 35.18962333781788 19.098098970245818 19 18.1492489509414 24.68520314039746 37.052955954998104 20.112591953663046 20 24.100758778755463 22.88469908488317 35.36411628952353 17.65042584683784 21 23.10604589140846 24.413078171415343 33.634249771478444 18.846626165697746 22 20.64387978458326 24.07792644341188 34.69440742558284 20.583786346422023 23 19.463257777858818 26.739360171369363 36.095028496815765 17.70235355395606 24 17.476408568785185 25.682770069662407 34.059184901484024 22.781636460068384 25 19.083908039598246 27.004944627622844 35.779419028056026 18.131728304722884 26 21.098306681074295 25.37263084791207 33.74420966426161 19.784852806752028 27 19.16643741839224 27.322020756812638 33.223664130004785 20.287877694790343 28 18.811703791673967 26.819312984542986 33.20844257310906 21.16054065067399 29 17.5953666215041 26.683072122432055 34.549128764065074 21.172432491998773 30 16.73166218608512 26.73432595854187 37.78513662536498 18.74887523000803 31 18.838262237299315 26.185081447221233 35.528501176103106 19.448155139376343 32 20.5056569489182 26.432312828363468 32.945157206178365 20.116873016539966 33 21.674664590615432 26.462240629030838 32.04379527323091 19.819299507122818 34 19.056636083493412 30.316505320806204 32.08977705968674 18.53708153601365 35 17.10930742708914 31.358270260328265 32.3969036816348 19.135518630947804 36 18.466047603833612 26.3684140009783 35.53734077815453 19.628197617033557 37 18.634198240166043 26.787284291908236 34.07837040548801 20.500147062437716 38 19.256458657220847 26.139694252831646 34.82165012775801 19.782196962189495 39 20.793875543159853 25.42075316580636 34.279461442290085 19.505909848743705 40 18.158088552992822 26.696628821542305 33.31895741848737 21.826325206977497 41 19.456836183543437 25.931864505945523 33.04532614960412 21.56597316090692 42 16.102742337888436 28.097765205899307 33.80200401310005 21.997488443112207 43 16.98931874812208 27.95078204712499 33.14985543484896 21.910043769903968 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 284.0 1 387.5 2 491.0 3 1418.5 4 2346.0 5 2346.0 6 4200.5 7 6055.0 8 6934.5 9 7814.0 10 11765.0 11 15716.0 12 15716.0 13 28301.5 14 40887.0 15 69094.5 16 97302.0 17 94837.5 18 92373.0 19 92373.0 20 96033.0 21 99693.0 22 77796.0 23 55899.0 24 58770.0 25 61641.0 26 61641.0 27 63570.5 28 65500.0 29 65087.0 30 64674.0 31 68303.5 32 71933.0 33 71933.0 34 76793.0 35 81653.0 36 87970.0 37 94287.0 38 95879.0 39 97471.0 40 97471.0 41 102590.5 42 107710.0 43 131615.5 44 155521.0 45 219444.5 46 283368.0 47 283368.0 48 285920.5 49 288473.0 50 255384.5 51 222296.0 52 200286.0 53 178276.0 54 178276.0 55 151381.5 56 124487.0 57 95173.5 58 65860.0 59 54418.5 60 42977.0 61 42977.0 62 37167.0 63 31357.0 64 27030.0 65 22703.0 66 19261.0 67 15819.0 68 15819.0 69 13395.0 70 10971.0 71 9214.0 72 7457.0 73 5837.5 74 4218.0 75 4218.0 76 3340.0 77 2462.0 78 1927.0 79 1392.0 80 1059.5 81 727.0 82 727.0 83 517.0 84 307.0 85 239.5 86 172.0 87 134.0 88 96.0 89 96.0 90 74.5 91 53.0 92 32.0 93 11.0 94 7.5 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2522738.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.27452717890583 #Duplication Level Percentage of deduplicated Percentage of total 1 69.22519862457901 21.649853558495504 2 13.822208146889558 8.645660487247822 3 6.091024785877632 5.714817606399572 4 3.211503991179068 4.017530754291773 5 1.9120852045051557 2.9899780348340106 6 1.1938752918830249 2.2402731158531872 7 0.8281216468430072 1.8129379066142322 8 0.6032944253426693 1.509419832180935 9 0.43412044279969897 1.2219220428532038 >10 2.3092239606969973 13.299188364812018 >50 0.19920546914882634 4.328122337355679 >100 0.1379832023024897 8.218070726152755 >500 0.016653884597093094 3.67009570290501 >1k 0.01281068045930238 8.516213404493165 >5k 0.0015372816551162858 3.493249687091042 >10k+ 0.0011529612413372142 8.67266643842011 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47173 1.8699127693799358 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 46206 1.8315814008430524 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 40908 1.6215714830473873 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 21002 0.8325081716769637 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14832 0.5879326350972633 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 12637 0.5009239960709356 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12363 0.4900627809943006 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11340 0.4495116020767912 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 10005 0.39659290818150755 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9881 0.391677613767264 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 9705 0.3847010668567247 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 9004 0.3569137976278155 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8563 0.3394327908803847 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 7360 0.2917465071680056 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7345 0.2911519151017664 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7306 0.2896059757295446 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6373 0.25262234920947 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5703 0.22606390358412168 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5521 0.21884951984708678 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 5420 0.2148459332677432 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5009 0.19855411065279074 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4463 0.17691095944168597 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4408 0.17473078853214244 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4072 0.16141192624838568 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3951 0.15661555024738993 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3884 0.1539597056848551 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3881 0.15384078727160727 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3665 0.14527866151776364 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3576 0.1417507485914114 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3561 0.14115615652517227 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 3534 0.1400858908059418 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3447 0.13663725682175476 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 3426 0.13580482792902 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3403 0.13489312009411997 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3197 0.1267273890511024 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 3175 0.12585532068728503 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 3096 0.12272380247175885 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 3021 0.11975084214056314 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3019 0.11967156319839793 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2960 0.11733283440452397 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 2888 0.1144787924865761 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2858 0.11328960835409782 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 2810 0.11138691374213255 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 2772 0.1098806138409934 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 2769 0.10976169542774557 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 2732 0.10829503499768901 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAAAAAAA 2722 0.10789864028686291 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTG 2721 0.10785900081578031 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACT 2668 0.10575810884840202 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTC 2629 0.10421216947618024 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2614 0.1036175774099411 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2612 0.10353829846777589 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAACTGTCTCT 2553 0.10119956967390192 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 2532 0.10036714078116712 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.963947108260945E-5 0.0 0.0 0.0 0.0 7 3.963947108260945E-5 0.0 0.0 0.0 0.0 8 3.963947108260945E-5 0.0 0.0 0.0 0.0 9 3.963947108260945E-5 0.0 0.0 7.92789421652189E-5 0.0 10 3.963947108260945E-5 3.963947108260945E-5 0.0 2.7747629757826614E-4 0.0 11 3.963947108260945E-5 3.963947108260945E-5 0.0 3.963947108260945E-4 0.0 12 3.963947108260945E-5 7.92789421652189E-5 0.0 9.513473059826268E-4 0.0 13 1.1891841324782835E-4 7.92789421652189E-5 0.0 0.001070265719230455 0.0 14 1.1891841324782835E-4 7.92789421652189E-5 0.0 0.0012288236035608929 0.0 15 1.585578843304378E-4 7.92789421652189E-5 0.0 0.001942334083047863 0.0 16 1.585578843304378E-4 7.92789421652189E-5 0.0 0.0031315182155261466 0.0 17 1.585578843304378E-4 7.92789421652189E-5 0.0 0.0049152944142435715 0.0 18 1.585578843304378E-4 7.92789421652189E-5 0.0 0.005708083835895761 0.0 19 1.585578843304378E-4 7.92789421652189E-5 0.0 0.007016186381621873 0.0 20 1.585578843304378E-4 7.92789421652189E-5 0.0 0.00876032310925669 0.0 21 1.585578843304378E-4 7.92789421652189E-5 0.0 0.012565712333187196 0.0 22 1.585578843304378E-4 7.92789421652189E-5 0.0 0.02017649078104821 0.0 23 1.585578843304378E-4 7.92789421652189E-5 0.0 0.032623284700987576 0.0 24 1.585578843304378E-4 7.92789421652189E-5 0.0 0.04970789673759225 0.0 25 1.585578843304378E-4 7.92789421652189E-5 0.0 0.058864614557675034 0.0 26 1.585578843304378E-4 7.92789421652189E-5 0.0 0.07071681641137526 0.0 27 1.585578843304378E-4 7.92789421652189E-5 0.0 0.16997405200222931 0.0 28 1.585578843304378E-4 7.92789421652189E-5 0.0 0.27771413440476184 0.0 29 1.585578843304378E-4 7.92789421652189E-5 0.0 0.40115144735600766 0.0 30 1.9819735541304725E-4 7.92789421652189E-5 0.0 0.651910741424595 0.0 31 2.378368264956567E-4 7.92789421652189E-5 0.0 0.9859525642377449 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10095 0.0 30.842497 1 GTATTGG 815 0.0 25.650309 1 ATTGGAC 750 0.0 24.666666 3 TATTGGA 960 0.0 20.812498 2 GAACCGT 55 5.1454356E-4 20.181818 6 CGGGTAA 65 6.906311E-5 19.923077 24 TCCACGG 325 0.0 19.923077 2 GTTATCA 310 0.0 19.693548 1 TTGGACC 1570 0.0 19.678345 4 GTCGTCA 85 1.2465152E-6 19.588236 24 CACGGCT 315 0.0 18.79365 4 CGTGCAC 50 0.0070371563 18.5 10 GCGTCGA 50 0.0070371563 18.5 11 TTTTTAC 2270 0.0 18.418503 1 ATCCACG 350 0.0 17.97143 1 ACGGCTC 340 0.0 17.955883 5 GGACCCT 1630 0.0 17.932516 6 TGGACCC 1735 0.0 17.59366 5 GTATCAA 17900 0.0 17.435476 2 GACCCTC 1645 0.0 17.094223 7 >>END_MODULE