##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088163_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2800882 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.869964889631195 31.0 31.0 33.0 28.0 34.0 2 31.013803509037512 31.0 31.0 34.0 28.0 34.0 3 31.07851812393382 31.0 31.0 34.0 28.0 34.0 4 35.04939729699431 35.0 35.0 37.0 32.0 37.0 5 34.89270522642511 35.0 35.0 37.0 32.0 37.0 6 34.96313554087605 36.0 35.0 37.0 32.0 37.0 7 34.80133757866272 35.0 35.0 37.0 32.0 37.0 8 34.86922333750583 36.0 35.0 37.0 32.0 37.0 9 36.34107684650763 38.0 35.0 39.0 32.0 39.0 10 36.14602685868237 38.0 35.0 39.0 31.0 39.0 11 36.194237743682166 38.0 35.0 39.0 32.0 39.0 12 36.0156682787779 38.0 35.0 39.0 30.0 39.0 13 36.086029686363084 38.0 35.0 39.0 31.0 39.0 14 36.96319159464769 39.0 36.0 40.0 31.0 41.0 15 37.03156077264233 39.0 36.0 40.0 31.0 41.0 16 36.999470166897424 39.0 36.0 40.0 31.0 41.0 17 37.07278992831544 39.0 36.0 40.0 31.0 41.0 18 37.079341436019085 39.0 36.0 40.0 31.0 41.0 19 37.17422833236102 39.0 36.0 40.0 31.0 41.0 20 37.13654484551652 39.0 36.0 40.0 31.0 41.0 21 37.02718465112061 39.0 36.0 40.0 31.0 41.0 22 36.97269395854592 39.0 36.0 40.0 31.0 41.0 23 36.85949818664264 39.0 35.0 40.0 31.0 41.0 24 36.79401524234152 39.0 35.0 40.0 30.0 41.0 25 36.690793114454664 38.0 35.0 40.0 30.0 41.0 26 36.420922409441026 38.0 35.0 40.0 30.0 41.0 27 36.24068989696817 38.0 35.0 40.0 30.0 41.0 28 36.09890884371423 38.0 35.0 40.0 29.0 41.0 29 35.94706881618005 38.0 34.0 40.0 29.0 41.0 30 35.76462985588111 38.0 34.0 40.0 29.0 41.0 31 35.517996116937454 38.0 34.0 40.0 27.0 41.0 32 35.251747842286825 38.0 34.0 40.0 27.0 41.0 33 35.43536607397241 38.0 34.0 40.0 27.0 41.0 34 35.4164120444917 38.0 34.0 40.0 27.0 41.0 35 35.33358813402349 38.0 34.0 40.0 27.0 41.0 36 35.24400635228474 38.0 34.0 40.0 26.0 41.0 37 35.105891287101706 38.0 34.0 40.0 26.0 41.0 38 34.98459628074299 38.0 33.0 40.0 25.0 41.0 39 34.94255273874444 38.0 33.0 40.0 25.0 41.0 40 34.799181115091606 38.0 33.0 40.0 24.0 41.0 41 34.67014140545728 38.0 33.0 40.0 24.0 41.0 42 34.46550265237879 38.0 33.0 40.0 23.0 41.0 43 34.14524567618343 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 1.0 14 5.0 15 12.0 16 30.0 17 94.0 18 219.0 19 583.0 20 1233.0 21 2512.0 22 4523.0 23 7839.0 24 12728.0 25 19668.0 26 29205.0 27 41556.0 28 57569.0 29 76156.0 30 97079.0 31 117656.0 32 142515.0 33 171496.0 34 204980.0 35 244989.0 36 305269.0 37 391036.0 38 487785.0 39 384143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.87468947281606 23.688431001377424 14.257330369505034 22.17954915630148 2 17.97198168291274 23.97523351572826 35.83664002981918 22.216144771539824 3 20.22702134541905 26.56059769743959 32.3574145572716 20.854966399869756 4 13.5314518783726 16.749331103559523 36.1029847026758 33.61623231539208 5 11.099146625955681 41.00172731303925 35.0009032868932 12.89822277411187 6 30.986703474119935 37.43692165539284 15.542461267557862 16.03391360292936 7 24.142573660725443 35.52455976367444 22.04944728124926 18.28341929435085 8 27.137451702713644 34.48495866659145 20.411855979652124 17.96573365104278 9 25.16660823269242 13.672800210790745 23.868659943546355 37.29193161297049 10 15.939300548898524 28.241211161341322 34.35956959272115 21.459918697039004 11 31.603509180322487 22.250669610501266 25.075529779548013 21.070291429628238 12 19.75502716644257 27.932379871768966 32.10417289982227 20.208420061966194 13 30.55858833039021 21.246021788850797 28.88904280865813 19.30634707210086 14 20.515501902614965 22.73487422890361 29.265138624190524 27.48448524429091 15 22.84241178314545 29.3970970572841 26.970897024580115 20.789594134990335 16 21.3987593907919 28.616414400892292 27.68774264678055 22.29708356153526 17 19.232477483878295 27.692526854040977 28.83398872212396 24.241006939956772 18 20.22495056914215 26.780778340537015 32.61319113050817 20.38107995981266 19 19.68329976057542 25.428597134759695 34.078158237298105 20.80994486736678 20 23.42162218901046 24.569796228473745 32.814699084074235 19.19388249844156 21 22.978725987028373 25.23555080149753 31.652350938025954 20.13337227344815 22 21.431177750437183 25.124764270683308 32.43464023118432 21.009417747695192 23 20.700193724691008 26.653354193429067 33.189366778036344 19.457085303843574 24 19.54602157463256 26.07714284286164 31.874102514850676 22.502733067655118 25 20.53717364744391 26.860110493765895 32.802738565923164 19.799977292867034 26 21.555674248326063 26.154939765402467 31.51310908492396 20.776276901347504 27 20.55020525677269 27.39876224703504 31.265080071206143 20.785952424986128 28 20.423316655253597 26.8359038331497 31.441453085135322 21.29932642646138 29 19.620748035797295 26.71015772888683 32.319033790070414 21.35006044524546 30 19.166141236938934 26.890815107526844 33.94284371851438 20.00019993701984 31 20.25726181966966 26.39047271538037 32.868075127763326 20.484190337186643 32 21.011774148286147 26.70526641250863 31.27689777720018 21.00606166200504 33 21.86007836103056 26.623470749571027 30.72607128754442 20.790379601853985 34 20.495186873277774 28.793251554331817 30.869704614475012 19.8418569579154 35 19.35397492646959 29.551619811188047 31.050004962722454 20.044400299619905 36 20.418925181424992 26.375691657128 32.61729698002272 20.58808618142428 37 20.223700962768156 26.602977205037554 32.05154661995757 21.121775212236717 38 20.544457067452324 26.33816776286898 32.422751119111766 20.69462405056693 39 21.213746241362543 25.96053671664854 32.43228383059336 20.393433211395553 40 19.653130692403323 26.65617473353037 31.862499027092177 21.828195546974133 41 20.39325469619927 26.1842519606324 31.64135440193482 21.78113894123351 42 18.50866976902276 27.68692147687764 31.74450048234806 22.059908271751542 43 18.94017670148189 27.344850657757092 31.58812117040275 22.126851470358268 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 348.5 2 464.0 3 1103.5 4 1743.0 5 1743.0 6 3270.0 7 4797.0 8 5250.0 9 5703.0 10 8897.5 11 12092.0 12 12092.0 13 22140.5 14 32189.0 15 52156.0 16 72123.0 17 69838.0 18 67553.0 19 67553.0 20 74181.5 21 80810.0 22 67587.5 23 54365.0 24 59745.5 25 65126.0 26 65126.0 27 70497.0 28 75868.0 29 80589.0 30 85310.0 31 92786.0 32 100262.0 33 100262.0 34 107961.0 35 115660.0 36 126904.0 37 138148.0 38 141129.0 39 144110.0 40 144110.0 41 150556.5 42 157003.0 43 173549.0 44 190095.0 45 227452.5 46 264810.0 47 264810.0 48 267903.5 49 270997.0 50 244885.0 51 218773.0 52 202163.5 53 185554.0 54 185554.0 55 161037.0 56 136520.0 57 113723.5 58 90927.0 59 79690.5 60 68454.0 61 68454.0 62 60032.5 63 51611.0 64 44711.0 65 37811.0 66 31891.0 67 25971.0 68 25971.0 69 21782.5 70 17594.0 71 14735.5 72 11877.0 73 9560.5 74 7244.0 75 7244.0 76 5616.5 77 3989.0 78 3146.0 79 2303.0 80 1822.5 81 1342.0 82 1342.0 83 1002.0 84 662.0 85 516.5 86 371.0 87 308.0 88 245.0 89 245.0 90 189.0 91 133.0 92 79.0 93 25.0 94 18.5 95 12.0 96 12.0 97 7.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2800882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.934436087655534 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17188627805722 31.845281109061013 2 13.670494740047653 11.738699654064142 3 5.041036755873447 6.493022112317126 4 2.391263508582013 4.106702011118294 5 1.2547681805311508 2.6936382125919254 6 0.7733723473046531 1.992258337038706 7 0.4611077756808057 1.3858181627141988 8 0.3309165748983393 1.1366173228254899 9 0.23297103396354607 0.9002231971184607 >10 1.405973435697961 11.655659177886635 >50 0.1511897870687278 4.5607078288309815 >100 0.10139679460825612 8.149676490407334 >500 0.00693675692009179 2.046062879425532 >1k 0.005599550766820136 4.802458105899918 >5k 6.686030766352402E-4 2.097518556616056 >10k+ 4.178769228970251E-4 4.395656842084055 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34212 1.2214723790577398 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33948 1.2120467766939127 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 28043 1.0012203298818014 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14389 0.5137310318678188 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11909 0.42518749451065774 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8573 0.3060821555495733 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8500 0.3034758336838182 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8317 0.29694217749980184 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7869 0.2809472159127018 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6914 0.24685081342234338 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6242 0.2228583710416933 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6026 0.21514651456219863 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6014 0.2147180780911156 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4792 0.1710889641191596 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4566 0.16302007724709572 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4378 0.1563079058667948 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4261 0.1521306502737352 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4178 0.14916729801541087 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3428 0.12239001857272103 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3371 0.1203549453350766 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3286 0.11732018699823842 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3252 0.11610628366350315 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3016 0.10768036639887008 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2996 0.10696630561373167 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.5703039256919784E-5 0.0 3 0.0 0.0 0.0 3.5703039256919784E-5 0.0 4 0.0 0.0 0.0 7.140607851383957E-5 0.0 5 0.0 0.0 0.0 7.140607851383957E-5 0.0 6 0.0 0.0 0.0 7.140607851383957E-5 0.0 7 0.0 0.0 0.0 1.0710911777075935E-4 0.0 8 0.0 0.0 0.0 1.0710911777075935E-4 0.0 9 0.0 0.0 0.0 2.142182355415187E-4 0.0 10 0.0 0.0 0.0 3.213273533122781E-4 0.0 11 0.0 0.0 0.0 3.9273343182611765E-4 0.0 12 0.0 0.0 0.0 6.783577458814759E-4 0.0 13 0.0 0.0 0.0 7.854668636522353E-4 0.0 14 0.0 0.0 0.0 0.0011067942169645133 0.0 15 0.0 0.0 0.0 0.0014638246095337111 0.0 16 0.0 0.0 0.0 0.0022135884339290267 0.0 17 0.0 0.0 0.0 0.0031061644153520212 0.0 18 0.0 0.0 0.0 0.0035346008864350588 0.0 19 0.0 0.0 0.0 0.004070146475288855 0.0 20 0.0 0.0 0.0 0.00492701941745493 0.0 21 0.0 0.0 0.0 0.007033498733613198 0.0 22 0.0 0.0 0.0 0.011996221190325047 0.0 23 0.0 0.0 0.0 0.01974378070907664 0.0 24 0.0 0.0 0.0 0.03177570493865861 0.0 25 0.0 0.0 0.0 0.0360957726887459 0.0 26 0.0 0.0 0.0 0.04284364710830374 0.0 27 0.0 0.0 0.0 0.09632679991516958 0.0 28 0.0 0.0 0.0 0.1588071186147792 0.0 29 0.0 0.0 0.0 0.2355329499778998 0.0 30 0.0 0.0 0.0 0.3754888638650254 0.0 31 0.0 0.0 0.0 0.6043453455018812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7415 0.0 29.365475 1 GTATTGG 815 0.0 19.521471 1 AACACCG 90 2.1544638E-6 18.5 5 ATTGGAC 915 0.0 18.196722 3 GTATCAA 12695 0.0 17.224892 2 GGACCCT 1400 0.0 16.517857 6 CGTCTGT 670 0.0 16.291044 34 TTGGACC 1490 0.0 16.2651 4 TAACGCG 70 0.0025937408 15.857142 5 GACCCTC 1480 0.0 15.625 7 CGAATTA 225 0.0 15.622222 15 CGATTAG 85 5.36757E-4 15.235294 1 CGCCGGA 170 1.4897523E-9 15.235294 14 CCGTTAG 110 1.4532705E-5 15.136364 9 TGGACCC 1510 0.0 15.069537 5 TGCGTCT 745 0.0 14.899328 32 TATTGGA 1090 0.0 14.256881 2 ATTACGT 195 6.7484507E-10 14.23077 17 TCCGTTA 105 1.6569717E-4 14.095238 8 TTAGTAC 160 1.7861021E-7 13.875 3 >>END_MODULE