##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088160_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3364310 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.073562483837698 31.0 31.0 33.0 28.0 34.0 2 31.217396434930194 31.0 31.0 34.0 28.0 34.0 3 31.27625991659508 31.0 31.0 34.0 28.0 34.0 4 35.247396642996634 37.0 35.0 37.0 33.0 37.0 5 35.101380372201135 37.0 35.0 37.0 32.0 37.0 6 35.14646331640069 37.0 35.0 37.0 32.0 37.0 7 34.98978245167657 37.0 35.0 37.0 32.0 37.0 8 35.047224245090376 37.0 35.0 37.0 32.0 37.0 9 36.552226756749526 39.0 35.0 39.0 32.0 39.0 10 36.39853313160797 38.0 35.0 39.0 32.0 39.0 11 36.41389348781771 38.0 35.0 39.0 32.0 39.0 12 36.251762768591476 38.0 35.0 39.0 32.0 39.0 13 36.31183244112463 38.0 35.0 39.0 32.0 39.0 14 37.25217117328665 39.0 36.0 41.0 32.0 41.0 15 37.30489491158662 39.0 36.0 41.0 32.0 41.0 16 37.286545235129935 39.0 36.0 41.0 32.0 41.0 17 37.37125205465608 39.0 36.0 41.0 32.0 41.0 18 37.36861377221481 39.0 36.0 41.0 32.0 41.0 19 37.46083327636276 39.0 36.0 41.0 32.0 41.0 20 37.41611563738181 39.0 36.0 41.0 32.0 41.0 21 37.29639569480815 39.0 36.0 41.0 31.0 41.0 22 37.25756663327696 39.0 36.0 41.0 31.0 41.0 23 37.16148898288208 39.0 36.0 40.0 31.0 41.0 24 37.09231075614316 39.0 36.0 40.0 31.0 41.0 25 36.99191988847639 39.0 36.0 40.0 31.0 41.0 26 36.73772839007107 39.0 35.0 40.0 30.0 41.0 27 36.57507869369945 38.0 35.0 40.0 30.0 41.0 28 36.43906477108233 38.0 35.0 40.0 30.0 41.0 29 36.308194250827064 38.0 35.0 40.0 30.0 41.0 30 36.14931977136471 38.0 35.0 40.0 30.0 41.0 31 35.91080102606478 38.0 35.0 40.0 29.0 41.0 32 35.6428078863125 38.0 34.0 40.0 28.0 41.0 33 35.80135391803966 38.0 34.0 40.0 29.0 41.0 34 35.79163454021776 38.0 34.0 40.0 29.0 41.0 35 35.699159114350344 38.0 34.0 40.0 28.0 41.0 36 35.62394458299027 38.0 34.0 40.0 27.0 41.0 37 35.49612193882252 38.0 34.0 40.0 27.0 41.0 38 35.37580900689889 38.0 34.0 40.0 27.0 41.0 39 35.33350226346561 38.0 34.0 40.0 26.0 41.0 40 35.186399885860695 38.0 34.0 40.0 25.0 41.0 41 35.06564228623403 38.0 34.0 40.0 25.0 41.0 42 34.867873055693444 38.0 33.0 40.0 24.0 41.0 43 34.56987049350387 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 0.0 12 1.0 13 0.0 14 7.0 15 10.0 16 27.0 17 95.0 18 231.0 19 531.0 20 1105.0 21 2302.0 22 4269.0 23 7523.0 24 12373.0 25 19704.0 26 29637.0 27 43715.0 28 60690.0 29 82922.0 30 105590.0 31 131327.0 32 158556.0 33 193214.0 34 234337.0 35 283169.0 36 353373.0 37 459449.0 38 580725.0 39 599427.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.04936822112112 22.428878432724687 13.71883090440536 22.802922441748827 2 17.484773995262028 22.98964720849149 36.5951116276443 22.93046716860218 3 19.669204086424855 26.234621660905205 32.15182310785867 21.944351144811268 4 12.763270923309683 15.706757106211972 35.81578392003115 35.71418805044719 5 11.239095089334812 40.44689698630626 34.969072410093005 13.344935514265927 6 31.586566041773796 36.34879068813516 15.60831195698375 16.456331313107295 7 24.925586524428486 35.02180239038614 21.537135400721098 18.515475684464274 8 27.708534588073036 33.57880219123683 20.28148416763021 18.431179053059914 9 25.427621116960093 13.545035980631987 23.46876476900167 37.55857813340626 10 16.202371362924346 27.502340747434097 34.08045037466821 22.214837514973354 11 31.75287057375807 21.699902803249405 25.29930357190627 21.247923051086257 12 20.289569034958134 27.177400417916303 31.915846042724954 20.617184504400605 13 31.093181068331994 20.689859139021078 28.684752594142633 19.5322071985043 14 21.0145319545464 22.17658301405043 28.533250503074925 28.275634528328247 15 23.053345262475812 28.847193035124587 26.949300153671928 21.150161548727674 16 21.869476950697173 28.393786541668277 27.030951368928548 22.705785138706005 17 19.556432076711122 27.05574099889725 27.908962015985445 25.47886490840618 18 20.663345529989805 26.455350428468243 32.11226076075035 20.769043280791603 19 20.001456465070103 24.830470438217645 33.39445532664945 21.773617770062806 20 24.359556640143147 23.784520451444724 32.18796722061879 19.667955687793338 21 23.667408770297623 24.776283992854403 30.91174713388481 20.644560102963165 22 22.03795131839813 24.286406425091624 31.96277988651462 21.71286236999563 23 21.09778825375783 26.07069503107621 32.935668829566836 19.895847885599128 24 19.73664733630373 25.35253885640741 31.374516617077497 23.536297190211368 25 20.994498128888242 26.274837931106234 32.53261441424839 20.19804952575714 26 22.404861620956453 25.272879134205827 31.096093998472195 21.226165246365525 27 20.853964111511722 26.78311451679542 30.7529032699127 21.610018101780156 28 20.742024367552336 26.055833142605767 30.925628137716206 22.276514352125695 29 19.838956576534265 26.120363462344432 31.847719145976438 22.192960815144858 30 19.239041586536317 26.30735574307956 33.709200400676515 20.744402269707606 31 20.79341677788313 25.82122337121133 32.419455995434426 20.965903855471108 32 21.8176684074892 25.87228881999578 30.55229749933865 21.757745273176372 33 22.661912843941252 25.872437438880485 30.09143033787017 21.37421937930809 34 20.9910501707631 28.50557766674296 30.09469995333367 20.408672209160272 35 19.65131037270644 29.383201904699625 30.429300510357248 20.536187212236683 36 20.738398066765548 25.957536612262246 32.244680187022006 21.0593851339502 37 20.78063555379855 26.11825307418163 31.514307540030494 21.586803831989325 38 20.98266806566577 25.75559327172585 32.09442649458582 21.16731216802257 39 21.790976455796283 25.336606911967092 32.01354809752966 20.858868534706968 40 20.11211808662103 26.095960241475964 31.16439923788236 22.627522434020648 41 21.17744797595941 25.545089483430484 31.025083895360417 22.252378645249696 42 18.657376995580073 27.368197342099865 31.42944615686426 22.5449795054558 43 19.40270070237285 27.029970484289496 31.13140584547797 22.435922967859682 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 292.0 2 410.0 3 1303.0 4 2196.0 5 2196.0 6 3728.5 7 5261.0 8 5795.5 9 6330.0 10 9562.5 11 12795.0 12 12795.0 13 23549.0 14 34303.0 15 56534.5 16 78766.0 17 78297.5 18 77829.0 19 77829.0 20 82857.0 21 87885.0 22 72286.5 23 56688.0 24 61995.5 25 67303.0 26 67303.0 27 73889.5 28 80476.0 29 85164.0 30 89852.0 31 97283.0 32 104714.0 33 104714.0 34 115847.0 35 126980.0 36 138110.0 37 149240.0 38 155536.5 39 161833.0 40 161833.0 41 171609.0 42 181385.0 43 204914.5 44 228444.0 45 282851.0 46 337258.0 47 337258.0 48 339812.5 49 342367.0 50 311830.0 51 281293.0 52 262012.5 53 242732.0 54 242732.0 55 212427.0 56 182122.0 57 149987.0 58 117852.0 59 104226.5 60 90601.0 61 90601.0 62 79941.0 63 69281.0 64 60351.5 65 51422.0 66 43240.0 67 35058.0 68 35058.0 69 29458.0 70 23858.0 71 19863.5 72 15869.0 73 12786.5 74 9704.0 75 9704.0 76 7556.0 77 5408.0 78 4227.5 79 3047.0 80 2382.5 81 1718.0 82 1718.0 83 1253.5 84 789.0 85 653.5 86 518.0 87 413.0 88 308.0 89 308.0 90 250.0 91 192.0 92 112.5 93 33.0 94 22.0 95 11.0 96 11.0 97 6.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3364310.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.676064958518225 #Duplication Level Percentage of deduplicated Percentage of total 1 71.99793451828045 28.565947268264363 2 14.225088023704693 11.28791032938294 3 5.525597715059881 6.5770192163206715 4 2.675233042765742 4.245708799357917 5 1.4882317256196895 2.9523589309507234 6 0.9016820403495551 2.146511712290292 7 0.5767633667585932 1.6018590563645327 8 0.40558390109810577 1.2873578564878139 9 0.28915229030984696 1.0325182547914027 >10 1.61716849478696 12.323772431944565 >50 0.1733803100500976 4.827635722791559 >100 0.10840613940728656 7.846919743814031 >500 0.008153448016329548 2.177672175190942 >1k 0.006266075790226226 5.211831904681239 >5k 6.794540013498318E-4 2.0276056350744405 >10k+ 6.794540013498318E-4 5.8873709622926835 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39347 1.1695414512931328 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38486 1.143949279347028 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34882 1.0368247872520666 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 23873 0.709595726909827 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13195 0.3922052367350214 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12172 0.3617978129244927 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 11657 0.3464900677999352 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11545 0.34316100478255573 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11394 0.33867271446448155 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9607 0.2855563250711141 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 9045 0.26885156243033487 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8774 0.2607964188793542 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8695 0.258448240501024 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6942 0.20634245952364677 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6870 0.2042023475839028 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6685 0.19870344884983845 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 6044 0.17965050783072906 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5030 0.14951059801266828 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4684 0.1392261711911209 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4532 0.13470815709610587 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4405 0.13093323742461307 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4226 0.12561268135219406 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4149 0.12332395052774565 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3897 0.1158335587386418 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3841 0.11416902722995205 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.9723776940888324E-5 0.0 0.0 0.0 0.0 3 2.9723776940888324E-5 0.0 0.0 2.9723776940888324E-5 0.0 4 2.9723776940888324E-5 0.0 0.0 2.9723776940888324E-5 0.0 5 2.9723776940888324E-5 0.0 0.0 5.944755388177665E-5 0.0 6 2.9723776940888324E-5 0.0 0.0 5.944755388177665E-5 0.0 7 2.9723776940888324E-5 0.0 0.0 5.944755388177665E-5 0.0 8 1.188951077635533E-4 0.0 0.0 5.944755388177665E-5 0.0 9 1.188951077635533E-4 0.0 0.0 5.944755388177665E-5 0.0 10 1.188951077635533E-4 0.0 0.0 5.944755388177665E-5 0.0 11 1.188951077635533E-4 0.0 0.0 1.188951077635533E-4 0.0 12 1.188951077635533E-4 2.9723776940888324E-5 0.0 2.9723776940888323E-4 0.0 13 1.188951077635533E-4 2.9723776940888324E-5 0.0 3.566853232906599E-4 0.0 14 1.188951077635533E-4 2.9723776940888324E-5 0.0 5.647517618768782E-4 0.0 15 1.188951077635533E-4 2.9723776940888324E-5 0.0 8.917133082266497E-4 0.0 16 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.0016645315086897463 0.0 17 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.002645416147739061 0.0 18 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.003388510571261269 0.0 19 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.0041613287717243656 0.0 20 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.00567724139570967 0.0 21 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.008768514197562055 0.0 22 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.014951059801266828 0.0 23 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.025235486622814187 0.0 24 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.03959207088526325 0.0 25 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.04562599760426358 0.0 26 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.053473074716658096 0.0 27 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.11467433143794716 0.0 28 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.17881824207638417 0.0 29 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.2556542054685805 0.0 30 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.4075724294134607 0.0 31 1.188951077635533E-4 2.9723776940888324E-5 0.0 0.6244965535280637 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8230 0.0 31.33536 1 GTATTGG 1075 0.0 22.2 1 ATTGGAC 1135 0.0 21.515419 3 TATTGGA 1200 0.0 20.8125 2 TAAAGCG 45 0.0038273185 20.555555 4 TTGGACC 1935 0.0 18.643412 4 GGACCCT 2025 0.0 18.180246 6 GTATCAA 15080 0.0 17.113728 2 TGGACCC 2100 0.0 17.002382 5 GACCCTC 2090 0.0 16.729666 7 CGTCTGT 1075 0.0 16.176744 34 ACGGACC 180 2.0190782E-10 15.416666 8 GACCGTC 185 3.0559022E-10 15.0 22 ACCCTCG 2370 0.0 14.909284 8 TAATGCG 75 0.004106592 14.8 5 GTACGGG 180 3.3378456E-9 14.388888 37 ACGTTTA 155 1.2122655E-7 14.322581 26 ACCGACC 300 0.0 14.183333 8 TGCGTCT 1195 0.0 14.087866 32 CTAGCGG 135 6.5755085E-6 13.703704 29 >>END_MODULE