##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088159_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3833605 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11239394773327 31.0 31.0 33.0 30.0 34.0 2 31.256108806201997 31.0 31.0 34.0 28.0 34.0 3 31.31061755188654 31.0 31.0 34.0 28.0 34.0 4 35.26707055108703 37.0 35.0 37.0 33.0 37.0 5 35.139308562045386 37.0 35.0 37.0 32.0 37.0 6 35.1863105353838 37.0 35.0 37.0 32.0 37.0 7 35.022748822583445 37.0 35.0 37.0 32.0 37.0 8 35.0824855455896 37.0 35.0 37.0 32.0 37.0 9 36.58422998717917 39.0 35.0 39.0 32.0 39.0 10 36.43369230789296 38.0 35.0 39.0 32.0 39.0 11 36.45774173395537 38.0 35.0 39.0 32.0 39.0 12 36.296208399143886 38.0 35.0 39.0 32.0 39.0 13 36.34224965795902 38.0 35.0 39.0 32.0 39.0 14 37.275657246899456 39.0 36.0 41.0 32.0 41.0 15 37.33143529393352 39.0 36.0 41.0 32.0 41.0 16 37.31676894202715 39.0 36.0 41.0 32.0 41.0 17 37.40807021067637 39.0 36.0 41.0 32.0 41.0 18 37.414384111039084 39.0 36.0 41.0 32.0 41.0 19 37.50778888278787 39.0 36.0 41.0 32.0 41.0 20 37.4685114924464 39.0 36.0 41.0 32.0 41.0 21 37.34896735579174 39.0 36.0 41.0 31.0 41.0 22 37.30932946925935 39.0 36.0 41.0 31.0 41.0 23 37.193986078377925 39.0 36.0 41.0 31.0 41.0 24 37.125746392755644 39.0 36.0 41.0 31.0 41.0 25 37.03528871649531 39.0 36.0 40.0 31.0 41.0 26 36.7689344624707 39.0 35.0 40.0 30.0 41.0 27 36.62367875667942 38.0 35.0 40.0 30.0 41.0 28 36.48401621972008 38.0 35.0 40.0 30.0 41.0 29 36.35436801652752 38.0 35.0 40.0 30.0 41.0 30 36.18393757311982 38.0 35.0 40.0 30.0 41.0 31 35.94033318508297 38.0 35.0 40.0 29.0 41.0 32 35.653574898822384 38.0 34.0 40.0 28.0 41.0 33 35.82238910894576 38.0 34.0 40.0 29.0 41.0 34 35.80465853941656 38.0 34.0 40.0 29.0 41.0 35 35.728633231644885 38.0 34.0 40.0 28.0 41.0 36 35.65269296132492 38.0 34.0 40.0 27.0 41.0 37 35.524572041198816 38.0 34.0 40.0 27.0 41.0 38 35.40532397051861 38.0 34.0 40.0 27.0 41.0 39 35.36427670560739 38.0 34.0 40.0 26.0 41.0 40 35.218787538100564 38.0 34.0 40.0 25.0 41.0 41 35.0904310694503 38.0 34.0 40.0 25.0 41.0 42 34.8772192231594 38.0 34.0 40.0 24.0 41.0 43 34.57893210176844 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 2.0 14 5.0 15 27.0 16 38.0 17 103.0 18 250.0 19 602.0 20 1314.0 21 2626.0 22 4776.0 23 8262.0 24 13651.0 25 21736.0 26 33607.0 27 48332.0 28 68783.0 29 92106.0 30 118796.0 31 145959.0 32 178536.0 33 217717.0 34 265638.0 35 322678.0 36 402704.0 37 528921.0 38 671240.0 39 685193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.945141713869845 22.595989936365378 13.815560027702384 22.643308322062396 2 17.341510145150583 23.04462770681904 36.89814156648899 22.715720581541397 3 19.628548063767653 26.30448363876821 32.286033641963634 21.7809346555005 4 12.739288476512318 15.718886009382812 35.89749074304734 35.64433477105753 5 11.23793400728557 40.48573079386113 34.9429062201244 13.333428978728898 6 31.484594787412888 36.40351575084026 15.703939242566722 16.40795021918012 7 24.86189891759845 35.10066895259162 21.5897568998371 18.44767522997283 8 27.5526038806815 33.760390024533045 20.319464316224543 18.367541778560913 9 25.342986562256677 13.716332277321216 23.66083621030336 37.27984495011875 10 16.15659411963413 27.593818351134246 34.056116892585436 22.193470636646182 11 31.63067139154921 21.81215852963464 25.39823482074966 21.158935258066496 12 20.33537623203225 27.140354835722512 32.0479809474372 20.476287984808035 13 31.04326084716605 20.75698983072069 28.716286628382427 19.483462693730836 14 20.97002690678878 22.34215575157065 28.594234408604958 28.093582933035616 15 22.91540208237416 28.94380093932474 26.987313507781842 21.153483470519262 16 21.790533975200887 28.56441913029642 27.12770355839999 22.5173433361027 17 19.48335835329931 27.1162782811479 28.080383868447583 25.319979497105205 18 20.610834971260733 26.528815566548978 32.24153244791782 20.618817014272466 19 19.897798547320342 24.910860665091995 33.604609760264815 21.58673102732285 20 24.219292284938067 23.846640433743175 32.33207385737445 19.601993423944304 21 23.62588216574217 24.82115397908757 31.10727370190721 20.44569015326305 22 21.984581092731254 24.39573195464843 32.05087639441205 21.568810558208266 23 21.00678082379379 26.18457039783702 32.9599424040818 19.848706374287385 24 19.76111258202136 25.44821388745058 31.439676231640973 23.35099729888708 25 20.997155418985525 26.423275220060493 32.45900399232576 20.120565368628224 26 22.318366133182735 25.4094514171387 31.129472128714358 21.14271032096421 27 20.85337430434278 26.838341456670676 30.81125989766812 21.49702434131842 28 20.753703107127624 26.190543887541885 30.999385695709393 22.0563673096211 29 19.831464117977728 26.15498988549942 31.882105746418844 22.131440250104014 30 19.20036101789308 26.481705861715017 33.787335940974614 20.530597179417285 31 20.790196173053825 25.888608763813696 32.51339144225866 20.807803620873823 32 21.676489883543034 25.97427225809649 30.664635506266297 21.684602352094178 33 22.529316400620303 26.00233983417697 30.156106328116746 21.31223743708598 34 20.86148677289392 28.59068683393307 30.191895096130146 20.35593129704286 35 19.574812741531797 29.52338595134345 30.428174003320635 20.473627303804122 36 20.607626502991312 26.004974430073 32.388626371261516 20.998772695674177 37 20.739356297792806 26.223385038364672 31.51297538478795 21.524283279054572 38 20.879355071792737 25.84650739969298 32.221577340388485 21.0525601881258 39 21.70870499177667 25.44823997255847 32.08843894976139 20.75461608590348 40 20.02892838464057 26.261756232058335 31.230969283481215 22.47834609981988 41 21.018623462771984 25.719055562584042 31.14796647020233 22.114354504441643 42 18.56124978968882 27.46094081158596 31.547851174025492 22.429958224699728 43 19.25847863825303 27.185377731925954 31.177051365490183 22.379092264330833 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 242.0 1 378.0 2 514.0 3 1581.5 4 2649.0 5 2649.0 6 4539.0 7 6429.0 8 6949.0 9 7469.0 10 11122.5 11 14776.0 12 14776.0 13 27237.0 14 39698.0 15 65538.0 16 91378.0 17 90800.0 18 90222.0 19 90222.0 20 96685.0 21 103148.0 22 85339.5 23 67531.0 24 73679.5 25 79828.0 26 79828.0 27 87340.0 28 94852.0 29 100017.0 30 105182.0 31 113829.5 32 122477.0 33 122477.0 34 134582.5 35 146688.0 36 159531.0 37 172374.0 38 179324.0 39 186274.0 40 186274.0 41 196080.5 42 205887.0 43 230855.5 44 255824.0 45 317423.0 46 379022.0 47 379022.0 48 382451.5 49 385881.0 50 351505.0 51 317129.0 52 295419.0 53 273709.0 54 273709.0 55 238512.0 56 203315.0 57 168923.5 58 134532.0 59 118684.0 60 102836.0 61 102836.0 62 90109.5 63 77383.0 64 67167.0 65 56951.0 66 48365.0 67 39779.0 68 39779.0 69 33387.0 70 26995.0 71 22516.5 72 18038.0 73 14343.5 74 10649.0 75 10649.0 76 8387.5 77 6126.0 78 4755.0 79 3384.0 80 2683.0 81 1982.0 82 1982.0 83 1514.0 84 1046.0 85 851.0 86 656.0 87 525.0 88 394.0 89 394.0 90 331.5 91 269.0 92 162.5 93 56.0 94 40.5 95 25.0 96 25.0 97 15.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3833605.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.88791031313994 #Duplication Level Percentage of deduplicated Percentage of total 1 70.99934028625387 27.61015977343944 2 14.459706726670282 11.246155566821205 3 5.739984497857607 6.6964800705450065 4 2.825801961287118 4.395581329329136 5 1.6044242665239787 3.119635349040491 6 1.0323857408594697 2.4088394459464557 7 0.6336574140638123 1.7249128881158797 8 0.43249151931870855 1.3454953131567655 9 0.32019510145824936 1.120654654939363 >10 1.6575221093516346 12.011135007713845 >50 0.164984969899494 4.47792549088818 >100 0.11292136972588579 8.094560212626064 >500 0.009033580984510785 2.4095047745025595 >1k 0.0061347452931167865 5.081197769026403 >5k 6.74147834408438E-4 1.8426056537079478 >10k+ 7.415626178492819E-4 6.415156700201212 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45076 1.1758123228658144 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 44418 1.1586483218797972 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 39796 1.0380829532515738 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 26098 0.6807691454909934 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15222 0.39706751217196345 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14445 0.3767993833480497 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13227 0.3450277219484011 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 12885 0.3361066150529332 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 12740 0.33232427441011786 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 10760 0.28067576080477774 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 10035 0.2617640575907012 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 9777 0.2550340997572781 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 9497 0.2477302695504623 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 7917 0.2065157990977161 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7773 0.2027595435627823 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7747 0.2020813307578637 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 6570 0.17137915878135593 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5337 0.13921622076348503 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 5331 0.1390597101161961 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5325 0.1389031994689072 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5011 0.13071247559412094 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4936 0.12875609250300957 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4759 0.12413902840798674 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4380 0.11425277252090395 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4170 0.10877489986579213 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3965 0.10342745275008772 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.608510788148492E-5 0.0 0.0 0.0 3 0.0 2.608510788148492E-5 0.0 0.0 0.0 4 0.0 2.608510788148492E-5 0.0 0.0 0.0 5 0.0 2.608510788148492E-5 0.0 0.0 0.0 6 2.608510788148492E-5 2.608510788148492E-5 0.0 0.0 0.0 7 2.608510788148492E-5 2.608510788148492E-5 0.0 2.608510788148492E-5 0.0 8 5.217021576296984E-5 2.608510788148492E-5 0.0 5.217021576296984E-5 0.0 9 5.217021576296984E-5 2.608510788148492E-5 0.0 1.304255394074246E-4 0.0 10 5.217021576296984E-5 5.217021576296984E-5 0.0 1.8259575517039445E-4 0.0 11 5.217021576296984E-5 5.217021576296984E-5 0.0 2.869361866963341E-4 0.0 12 5.217021576296984E-5 5.217021576296984E-5 0.0 5.217021576296984E-4 0.0 13 5.217021576296984E-5 5.217021576296984E-5 0.0 5.738723733926682E-4 0.0 14 5.217021576296984E-5 5.217021576296984E-5 0.0 8.086383443260325E-4 0.0 15 5.217021576296984E-5 5.217021576296984E-5 0.0 0.0011477447467853365 0.0 16 5.217021576296984E-5 5.217021576296984E-5 0.0 0.0019563830911113692 0.0 17 5.217021576296984E-5 5.217021576296984E-5 0.0 0.003417149132474525 0.0 18 5.217021576296984E-5 5.217021576296984E-5 0.0 0.0040431917216301625 0.0 19 5.217021576296984E-5 5.217021576296984E-5 0.0 0.004825744958074711 0.0 20 5.217021576296984E-5 5.217021576296984E-5 0.0 0.005947404596978562 0.0 21 5.217021576296984E-5 5.217021576296984E-5 0.0 0.00868634092453448 0.0 22 5.217021576296984E-5 5.217021576296984E-5 0.0 0.015651064728890954 0.0 23 5.217021576296984E-5 5.217021576296984E-5 0.0 0.02655463982335165 0.0 24 5.217021576296984E-5 5.217021576296984E-5 0.0 0.04142315131579805 0.0 25 5.217021576296984E-5 5.217021576296984E-5 0.0 0.04710970483396177 0.0 26 5.217021576296984E-5 5.217021576296984E-5 0.0 0.05451787547230348 0.0 27 5.217021576296984E-5 5.217021576296984E-5 0.0 0.11464404913912622 0.0 28 5.217021576296984E-5 5.217021576296984E-5 0.0 0.18165669128666098 0.0 29 5.217021576296984E-5 5.217021576296984E-5 0.0 0.26737235578522045 0.0 30 5.217021576296984E-5 5.217021576296984E-5 0.0 0.42393517328989294 0.0 31 5.217021576296984E-5 5.217021576296984E-5 0.0 0.6689786767285623 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10255 0.0 29.35105 1 GTATTGG 1425 0.0 23.498245 1 ATTGGAC 1525 0.0 22.806557 3 TATTGGA 1765 0.0 19.600567 2 TTGGACC 2415 0.0 19.380953 4 GGACCCT 2415 0.0 18.921326 6 TGGACCC 2495 0.0 18.462927 5 TAGGTCG 185 0.0 18.0 21 GTATCAA 17735 0.0 17.044827 2 GACCCTC 2670 0.0 16.629213 7 TATACCG 225 0.0 16.444445 5 ACGGACC 170 8.54925E-11 16.323528 8 CGGGATA 170 8.54925E-11 16.323528 24 CTGTGCG 295 0.0 16.305084 9 CATTGCG 205 5.456968E-12 15.341464 29 GTCGTCA 230 0.0 15.282609 24 TAGTACT 640 0.0 14.7421875 4 ACCCTCG 2970 0.0 14.700336 8 GTATCGT 90 8.2802284E-4 14.388889 6 AGGTCGT 270 0.0 14.388889 22 >>END_MODULE