##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088157_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 898130 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.81386770289379 31.0 31.0 33.0 28.0 34.0 2 30.992828432409564 31.0 31.0 34.0 28.0 34.0 3 31.03472437175019 31.0 31.0 34.0 27.0 34.0 4 35.001170209212475 35.0 35.0 37.0 32.0 37.0 5 34.82853261777248 35.0 35.0 37.0 32.0 37.0 6 34.90814692750493 35.0 35.0 37.0 32.0 37.0 7 34.72512776546825 35.0 35.0 37.0 31.0 37.0 8 34.795420484785055 35.0 35.0 37.0 32.0 37.0 9 36.24305501430751 38.0 35.0 39.0 32.0 39.0 10 36.050374667364416 38.0 35.0 39.0 31.0 39.0 11 36.12316034427087 38.0 35.0 39.0 31.0 39.0 12 35.951482524801534 37.0 35.0 39.0 30.0 39.0 13 35.99109037667153 38.0 35.0 39.0 30.0 39.0 14 36.86264460601472 38.0 36.0 40.0 31.0 41.0 15 36.915015643615064 38.0 36.0 40.0 31.0 41.0 16 36.887803547370645 38.0 36.0 40.0 31.0 41.0 17 36.9842962600069 38.0 36.0 40.0 31.0 41.0 18 36.991153841871444 38.0 36.0 40.0 31.0 41.0 19 37.10776056918264 39.0 36.0 40.0 31.0 41.0 20 37.075602641043055 39.0 36.0 40.0 31.0 41.0 21 36.971470722501195 39.0 36.0 40.0 31.0 41.0 22 36.93117254740405 39.0 36.0 40.0 31.0 41.0 23 36.808582276507856 39.0 35.0 40.0 31.0 41.0 24 36.732039905136226 39.0 35.0 40.0 30.0 41.0 25 36.63612283299745 38.0 35.0 40.0 30.0 41.0 26 36.34570162448643 38.0 35.0 40.0 30.0 41.0 27 36.172058610668834 38.0 35.0 40.0 30.0 41.0 28 36.03304644093839 38.0 34.0 40.0 29.0 41.0 29 35.87669157026266 38.0 34.0 40.0 29.0 41.0 30 35.6895159943438 38.0 34.0 40.0 28.0 41.0 31 35.42654738178215 38.0 34.0 40.0 27.0 41.0 32 35.11305044926681 37.0 33.0 40.0 27.0 41.0 33 35.273699798470155 38.0 34.0 40.0 27.0 41.0 34 35.24875018093149 38.0 34.0 40.0 27.0 41.0 35 35.17291706100453 38.0 34.0 40.0 26.0 41.0 36 35.056096556177835 38.0 33.0 40.0 25.0 41.0 37 34.911488314609244 38.0 33.0 40.0 25.0 41.0 38 34.79204012782114 38.0 33.0 40.0 25.0 41.0 39 34.71885918519591 38.0 33.0 40.0 24.0 41.0 40 34.550588444879914 38.0 33.0 40.0 24.0 41.0 41 34.41553115918631 38.0 33.0 40.0 23.0 41.0 42 34.189925734581855 38.0 33.0 40.0 22.0 41.0 43 33.85505661763887 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 9.0 16 13.0 17 39.0 18 94.0 19 193.0 20 442.0 21 867.0 22 1570.0 23 2679.0 24 4371.0 25 6680.0 26 9991.0 27 14116.0 28 19528.0 29 25386.0 30 32272.0 31 38714.0 32 46908.0 33 56453.0 34 66842.0 35 79478.0 36 98874.0 37 125333.0 38 151326.0 39 115952.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.830792869629114 24.52829768519034 15.06263013149544 21.5782793136851 2 17.67249729994544 24.8186788104172 35.493748121096054 22.015075768541305 3 20.078385089018294 26.724638972086446 32.87007448810306 20.3269014507922 4 13.89052809726877 17.482101700199305 35.998352131651316 32.629018070880605 5 10.890962332847138 41.337556923830626 35.02521906628216 12.74626167704007 6 30.619732110050883 37.850645229532475 15.684032378386203 15.845590282030441 7 23.310767928918978 36.18718893701357 22.394308173649694 18.10773496041776 8 26.65538396445949 34.97210871477403 20.7500027835614 17.62250453720508 9 24.688296794450693 14.311736608286104 24.69520002672219 36.30476657054101 10 15.700845089240978 29.162148018660993 34.876799572444966 20.260207319653055 11 30.860343157449364 23.15121418948259 25.13199648157839 20.85644617148965 12 19.101243695233432 28.929887655461904 32.461559017068794 19.507309632235867 13 29.669869617984034 22.3118034137597 29.39875073764377 18.619576230612495 14 20.2143342277844 23.667620500372998 29.68746172603075 26.430583545811853 15 22.081435872312472 30.580428223085743 27.44135036130627 19.896785543295515 16 20.688653090309867 29.307895293554388 28.43430238384198 21.569149232293768 17 18.570919577344036 28.790486900560055 29.530802890450158 23.107790631645752 18 19.143887855878326 27.68185006624876 33.49526237849754 19.678999699375368 19 19.077416409651164 26.660951087259082 34.795296894658904 19.466335608430853 20 22.116286061037936 25.852382171845946 33.7279681115206 18.303363655595515 21 21.739614532417356 26.48747954082371 32.55742487167782 19.215481055081113 22 20.288488303474995 26.49438277309521 33.13584893055571 20.081279992874084 23 19.75671673365771 28.01320521528064 33.71282553750571 18.517252513555942 24 18.653647022146014 27.456270250409183 32.63959560419984 21.250487123244966 25 19.551178559896673 28.155946243862246 33.41253493369557 18.880340262545513 26 20.46719294534199 27.35929097124024 32.3694788059635 19.804037277454267 27 19.598944473517196 28.436083863137853 32.040239163595466 19.924732499749478 28 19.34230011245588 28.281429191765113 32.22885328404574 20.14741741173327 29 18.603208889581687 27.930143743110687 32.99221716232616 20.474430204981463 30 18.231547771480745 28.220413525881554 34.44846514424415 19.09957355839355 31 19.456092102479598 27.751327758787703 33.417879371583176 19.374700767149523 32 20.050438132564327 28.185117967332125 31.926335831115765 19.838108068987786 33 20.709140102212377 28.036141761214967 31.615133666618416 19.639584469954237 34 19.424693529889883 29.962588934786723 31.550443699687126 19.06227383563627 35 18.28599423246078 30.45449990535891 31.83158340106666 19.42792246111365 36 19.243873381359048 27.737855321612688 33.322458886798124 19.695812410230147 37 19.021077126919266 27.7733735650741 32.83689443621747 20.368654871789165 38 19.388395889236527 27.654571164530743 33.120706356540815 19.836326589691915 39 20.144299822965493 27.11990469085767 33.06369901907296 19.672096467103874 40 18.696179840334917 27.70523198200706 32.575016979724545 21.02357119793348 41 19.254673599590262 27.03005132887221 32.48527496019507 21.230000111342456 42 17.31486533129948 28.34422633694454 32.784674824357275 21.556233507398705 43 17.79029761838487 28.163851558237674 32.52424481979224 21.521606003585227 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 162.0 1 196.0 2 230.0 3 478.5 4 727.0 5 727.0 6 1348.5 7 1970.0 8 2131.0 9 2292.0 10 3373.0 11 4454.0 12 4454.0 13 8116.5 14 11779.0 15 18707.5 16 25636.0 17 25159.0 18 24682.0 19 24682.0 20 27551.0 21 30420.0 22 26320.0 23 22220.0 24 24121.5 25 26023.0 26 26023.0 27 28039.5 28 30056.0 29 31420.5 30 32785.0 31 34996.0 32 37207.0 33 37207.0 34 40169.0 35 43131.0 36 45119.0 37 47107.0 38 47685.5 39 48264.0 40 48264.0 41 49207.0 42 50150.0 43 54101.0 44 58052.0 45 68629.5 46 79207.0 47 79207.0 48 79625.5 49 80044.0 50 72307.0 51 64570.0 52 59071.0 53 53572.0 54 53572.0 55 46533.5 56 39495.0 57 32818.0 58 26141.0 59 22687.0 60 19233.0 61 19233.0 62 16378.5 63 13524.0 64 11346.5 65 9169.0 66 7522.5 67 5876.0 68 5876.0 69 4881.5 70 3887.0 71 3213.5 72 2540.0 73 2038.0 74 1536.0 75 1536.0 76 1225.5 77 915.0 78 699.0 79 483.0 80 389.5 81 296.0 82 296.0 83 222.5 84 149.0 85 107.5 86 66.0 87 56.0 88 46.0 89 46.0 90 37.5 91 29.0 92 16.0 93 3.0 94 2.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 898130.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.171077166817604 #Duplication Level Percentage of deduplicated Percentage of total 1 77.26848531205435 39.53911624466246 2 12.768412276570999 13.067468198043116 3 4.392998307296363 6.743833661290839 4 1.9616478835197477 4.015185408868537 5 0.9731343423843173 2.48981662639141 6 0.592606367766937 1.8194583704729657 7 0.37812768156713195 1.354444054066708 8 0.2605863668185246 1.0667588068073088 9 0.18516388874732437 0.8527532075637629 >10 1.0536232329034823 9.929477102625729 >50 0.0946278359809357 3.3285806709138317 >100 0.058130062451034935 5.731430135722662 >500 0.008085760556793675 2.721962438133292 >1k 0.0037150791747430404 3.7026785378181435 >5k 2.1853406910253177E-4 1.0364055657787006 >10k+ 4.3706813820506353E-4 2.6006309708404682 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11671 1.299477803881398 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11585 1.289902352666095 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9268 1.031921882132876 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3980 0.4431429748477392 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3639 0.4051751973545032 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2642 0.29416676873058467 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2261 0.25174529299767295 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2250 0.2505205259817621 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2164 0.2409450747664592 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1996 0.22223954215982097 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1864 0.2075423379688909 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1642 0.1828243127386904 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1559 0.17358288889136317 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1516 0.16879516328371172 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1496 0.16656831416387383 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1357 0.15109171278100053 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1251 0.13928941244585974 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1249 0.13906672753387594 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1142 0.12715308474274326 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1103 0.1228107289590594 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 965 0.10744547003217796 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 938 0.10443922372039682 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.1134245599189427E-4 0.0 10 0.0 0.0 0.0 1.1134245599189427E-4 0.0 11 0.0 0.0 0.0 1.1134245599189427E-4 0.0 12 0.0 0.0 0.0 4.453698239675771E-4 0.0 13 0.0 0.0 0.0 4.453698239675771E-4 0.0 14 0.0 0.0 0.0 7.793971919432599E-4 0.0 15 0.0 0.0 0.0 0.0010020821039270485 0.0 16 0.0 0.0 0.0 0.0015587943838865199 0.0 17 0.0 0.0 0.0 0.0018928217518622025 0.0 18 0.0 0.0 0.0 0.0023381915758297796 0.0 19 0.0 0.0 0.0 0.0027835613997973566 0.0 20 0.0 0.0 0.0 0.003340273679756828 0.0 21 0.0 0.0 0.0 0.0038969859597162994 0.0 22 0.0 0.0 0.0 0.006012492623562291 0.0 23 0.0 0.0 0.0 0.010911560687205639 0.0 24 0.0 0.0 0.0 0.01926224488659771 0.0 25 0.0 0.0 0.0 0.02560876487813568 0.0 26 0.0 0.0 0.0 0.03384810662153586 0.0 27 0.0 0.0 0.0 0.10766815494416176 0.0 28 0.0 0.0 0.0 0.1808201485308363 0.0 29 0.0 0.0 0.0 0.2647723603487246 0.0 30 0.0 0.0 0.0 0.42065179873737657 0.0 31 0.0 0.0 0.0 0.6480130938728247 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2240 0.0 32.787945 1 TGCGTTA 55 1.9020592E-5 23.545454 37 ACGTTTA 60 3.7251186E-5 21.583334 26 AACTGCG 60 3.7251186E-5 21.583334 7 CGGGATA 55 5.1418925E-4 20.181818 24 GTATCAA 3955 0.0 18.616941 2 CTTAACG 70 1.2188207E-4 18.5 30 ACTGCGT 50 0.0070337136 18.5 8 ATCACGT 70 1.2188207E-4 18.5 23 AATGCGT 80 1.6160291E-5 18.5 35 GGACCCT 310 0.0 17.903227 6 ACCGACC 85 2.722043E-5 17.411764 8 CTAGGAC 85 2.722043E-5 17.411764 3 TATACCG 65 0.0015795708 17.076921 5 GCCGTCA 65 0.0015795708 17.076921 13 GACCCTC 315 0.0 17.031746 7 GTATTGG 185 1.8189894E-12 17.0 1 TCCACGG 110 7.802937E-7 16.818182 2 CGACCGC 90 4.4442153E-5 16.444445 10 TAACGCT 90 4.4442153E-5 16.444445 32 >>END_MODULE