##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088156_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 562347 Sequences flagged as poor quality 0 Sequence length 43 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.15298561208649 31.0 30.0 31.0 27.0 34.0 2 30.286828239503368 31.0 30.0 31.0 27.0 34.0 3 30.215511063453704 31.0 30.0 31.0 26.0 34.0 4 34.14071205145577 35.0 33.0 37.0 30.0 37.0 5 33.84368548245123 35.0 33.0 37.0 28.0 37.0 6 34.17208236195801 35.0 35.0 37.0 30.0 37.0 7 33.99214364084809 35.0 33.0 37.0 30.0 37.0 8 34.14327808274962 35.0 33.0 37.0 30.0 37.0 9 35.46349851604081 37.0 35.0 39.0 30.0 39.0 10 35.163815224407706 37.0 34.0 39.0 29.0 39.0 11 35.38650157287226 37.0 34.0 39.0 30.0 39.0 12 35.10003076392334 37.0 34.0 39.0 29.0 39.0 13 35.24536451692638 37.0 34.0 39.0 30.0 39.0 14 35.892171559553084 38.0 34.0 40.0 27.0 41.0 15 36.03573949892149 38.0 34.0 40.0 29.0 41.0 16 35.89716669600798 38.0 34.0 40.0 28.0 41.0 17 36.02623824791454 38.0 34.0 40.0 29.0 41.0 18 36.053756844083814 38.0 34.0 40.0 29.0 41.0 19 36.17375037121208 38.0 34.0 40.0 29.0 41.0 20 36.14847594101151 38.0 34.0 40.0 29.0 41.0 21 36.088054172957264 38.0 34.0 40.0 29.0 41.0 22 36.016472035949334 38.0 34.0 40.0 29.0 41.0 23 35.84641333553838 38.0 34.0 40.0 28.0 41.0 24 35.73557963321579 38.0 34.0 40.0 27.0 41.0 25 35.61132361335616 38.0 34.0 40.0 27.0 41.0 26 35.28515133894197 37.0 34.0 40.0 27.0 41.0 27 35.01628709675698 37.0 33.0 40.0 27.0 41.0 28 34.82484302396919 37.0 33.0 40.0 26.0 41.0 29 34.61946805086539 37.0 33.0 39.0 25.0 40.0 30 34.36415593930438 37.0 33.0 39.0 25.0 40.0 31 34.05253517845743 36.0 33.0 39.0 24.0 40.0 32 33.751580429876924 36.0 32.0 39.0 24.0 40.0 33 33.88817402778 36.0 32.0 39.0 24.0 40.0 34 33.80510432170884 36.0 32.0 39.0 24.0 40.0 35 33.64217822803358 36.0 32.0 39.0 23.0 40.0 36 33.452917860324675 36.0 32.0 39.0 22.0 40.0 37 33.25454034608525 36.0 31.0 39.0 21.0 40.0 38 33.095906975586246 36.0 31.0 39.0 20.0 40.0 39 32.90646344694646 36.0 31.0 39.0 18.0 40.0 40 32.693987875813335 36.0 31.0 39.0 18.0 40.0 41 32.497788731868404 36.0 30.0 39.0 15.0 40.0 42 32.21107963588318 35.0 30.0 39.0 15.0 40.0 43 31.80542440877252 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 4.0 15 15.0 16 38.0 17 80.0 18 172.0 19 380.0 20 691.0 21 1206.0 22 2059.0 23 3209.0 24 5065.0 25 7260.0 26 10010.0 27 13446.0 28 17503.0 29 21910.0 30 26760.0 31 31423.0 32 36874.0 33 42600.0 34 49794.0 35 58234.0 36 69239.0 37 76210.0 38 63817.0 39 24345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.89146736801299 26.559401935104127 15.683910468091767 18.86522022879112 2 22.81296068086075 26.91220900973954 29.852386515798962 20.42244379360075 3 25.334891090376583 25.461147654384213 31.194973921795615 18.008987333443585 4 19.325256469759776 19.62969483255001 31.267882641856364 29.777166055833852 5 11.038913695636325 43.302444931688086 33.26984939903654 12.388791973639051 6 32.0229324598513 37.575020405550305 13.906893786220964 16.495153348377425 7 22.498564053867096 37.30330205371416 22.233958747890537 17.9641751445282 8 27.331523063162066 36.22389734452216 20.123873693644672 16.320705898671108 9 24.43562426757856 13.849989419344283 24.952031396984424 36.76235491609273 10 17.043747010297913 30.455572804691766 33.46261294183129 19.038067243179032 11 31.992702014948065 22.52185927905724 23.805230578272845 21.68020812772185 12 18.047042128792366 30.36808234061887 32.47247695817707 19.112398572411696 13 30.7034624528983 21.578135919636807 30.21764142068865 17.500760206776242 14 19.778535317161825 23.85591103002239 31.232495238704928 25.13305841411086 15 23.221782991640396 30.48260237895819 27.634894469073366 18.660720160328054 16 20.352913770323305 28.215496837361986 30.360080164026837 21.071509228287873 17 18.133287809839832 29.007356667680273 31.43824009019342 21.421115432286474 18 18.55277968940885 26.183121809132082 35.0545126052064 20.20958589625267 19 18.5399762068616 26.09225264827589 37.327130757343774 18.04064038751874 20 21.061017485644985 25.10567318755146 36.59342007692759 17.23988924987597 21 21.22906319407768 24.92624660574343 35.13044436975746 18.71424583042143 22 19.885408831202085 25.36352109996141 35.41923403165661 19.33183603717989 23 19.19473207823639 27.282976525170398 35.79249111313833 17.72980028345488 24 18.15800564420189 26.489694085680192 35.14804915825994 20.20425111185798 25 19.010682016619633 27.21326867574647 35.77488632463586 18.001162982998043 26 19.75719617958307 26.31595794055983 34.866372542220375 19.060473337636726 27 19.855000560152362 26.86988638687501 34.72660119107953 18.548511861893104 28 19.314409074823907 27.58368053888435 34.872774283494 18.22913610279774 29 18.3651731048623 26.59087716303279 35.54015581126955 19.503793920835356 30 17.99138254494111 27.035264703110357 36.77871492156978 18.194637830378753 31 18.990765488212794 26.304577067184496 35.61964409875041 19.085013345852296 32 19.15436554298325 27.571232708630085 34.440834573670706 18.833567174715967 33 20.00668626310801 27.262526518324094 33.656443441504976 19.074343777062914 34 19.547716979018293 28.2169194465339 33.967817024008305 18.267546550439498 35 18.38491180712265 28.52953781206266 34.03432400279543 19.051226378019265 36 19.16325685030773 26.33729707813859 35.261324413573824 19.23812165797986 37 18.797112814685594 26.510499744819484 35.0063217195077 19.68606572098722 38 19.58719438353899 26.465331903611116 34.33218279816555 19.61529091468435 39 20.06661367447501 26.344054471705192 34.22708754559018 19.362244308229617 40 19.223362087821222 26.565092371791792 33.83373610955513 20.377809430831853 41 19.051582030312243 26.75945634990495 33.38668117728022 20.802280442502582 42 17.816935095234793 27.508460078919246 32.96843408073663 21.706170745109336 43 18.387579199319994 26.938171627127023 32.81603707319502 21.858212100357964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 101.0 1 116.5 2 132.0 3 233.5 4 335.0 5 335.0 6 775.5 7 1216.0 8 1402.5 9 1589.0 10 2415.5 11 3242.0 12 3242.0 13 6441.0 14 9640.0 15 15908.5 16 22177.0 17 20375.0 18 18573.0 19 18573.0 20 21763.0 21 24953.0 22 19795.0 23 14637.0 24 15084.5 25 15532.0 26 15532.0 27 16435.0 28 17338.0 29 17803.0 30 18268.0 31 19221.0 32 20174.0 33 20174.0 34 21804.5 35 23435.0 36 24949.0 37 26463.0 38 27287.5 39 28112.0 40 28112.0 41 29601.0 42 31090.0 43 33468.0 44 35846.0 45 41994.5 46 48143.0 47 48143.0 48 49139.5 49 50136.0 50 44950.5 51 39765.0 52 35527.5 53 31290.0 54 31290.0 55 27590.5 56 23891.0 57 20266.5 58 16642.0 59 14570.5 60 12499.0 61 12499.0 62 10838.5 63 9178.0 64 7846.5 65 6515.0 66 5322.5 67 4130.0 68 4130.0 69 3484.0 70 2838.0 71 2332.0 72 1826.0 73 1500.0 74 1174.0 75 1174.0 76 915.5 77 657.0 78 515.5 79 374.0 80 299.5 81 225.0 82 225.0 83 170.5 84 116.0 85 83.0 86 50.0 87 37.0 88 24.0 89 24.0 90 18.5 91 13.0 92 9.0 93 5.0 94 4.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 562347.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.26796739095089 #Duplication Level Percentage of deduplicated Percentage of total 1 83.72748531276531 47.94902898617763 2 9.64196378817939 11.043513356123734 3 2.7768440338168467 4.770726407351391 4 1.1942505735214533 2.7356921160420393 5 0.6508523553872968 1.8636495732321647 6 0.37312714673385716 1.2820939963099849 7 0.2627910566178265 1.0534656762716252 8 0.19192331105549715 0.8792846335271628 9 0.14619606103071597 0.7535116130213259 >10 0.9101042882239156 9.760891123486678 >50 0.06440912350329224 2.554385893531783 >100 0.05102944903108583 5.679165050287469 >500 0.004667327655282229 1.7396908909653441 >1k 0.003422706947206968 2.971177498305454 >5k 3.1115517701881527E-4 1.0666587804279986 >10k+ 6.223103540376305E-4 3.897064404938244 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11269 2.003922844791561 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10601 1.885134978936493 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5986 1.0644673128868831 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3542 0.6298602108662444 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1881 0.33449098154698076 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1745 0.31030662562439204 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1409 0.2505570404038788 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1264 0.2247722491628834 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1256 0.2233496399909664 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1225 0.2178370294497881 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1154 0.2052113730490249 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1142 0.20307745929114943 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1032 0.1835165831772909 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1024 0.18209397400537392 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 903 0.16057701028012952 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 831 0.14777352773287666 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 741 0.1317691745488106 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 726 0.12910178235146627 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 688 0.12234438878486059 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 671 0.11932134429453702 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 653 0.1161204736577238 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 631 0.11220829843495209 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 601 0.10687351404026339 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 590 0.10491742642887755 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC 567 0.10082742505961621 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 566 0.10064959891312658 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 563 0.10011612047365773 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 3.5565229297924593E-4 0.0 15 0.0 0.0 0.0 7.113045859584919E-4 0.0 16 0.0 0.0 0.0 8.891307324481148E-4 0.0 17 0.0 0.0 0.0 0.0012447830254273607 0.0 18 0.0 1.7782614648962296E-4 0.0 0.0016004353184066065 0.0 19 0.0 1.7782614648962296E-4 0.0 0.0019560876113858526 0.0 20 0.0 1.7782614648962296E-4 0.0 0.0030230444903235902 0.0 21 0.0 1.7782614648962296E-4 0.0 0.0048013059552198195 0.0 22 0.0 1.7782614648962296E-4 0.0 0.008002176592033033 0.0 23 0.0 1.7782614648962296E-4 0.0 0.011558699521825493 0.0 24 0.0 1.7782614648962296E-4 0.0 0.020272180699817018 0.0 25 0.0 1.7782614648962296E-4 0.0 0.024362182069078343 0.0 26 0.0 1.7782614648962296E-4 0.0 0.030586097196215148 0.0 27 0.0 1.7782614648962296E-4 0.0 0.08695698563342563 0.0 28 0.0 1.7782614648962296E-4 0.0 0.14688439700042857 0.0 29 0.0 1.7782614648962296E-4 0.0 0.20698963451392113 0.0 30 0.0 1.7782614648962296E-4 0.0 0.34338228887146194 0.0 31 0.0 1.7782614648962296E-4 0.0 0.5528614894362378 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2030 0.0 32.35222 1 CGTCGAG 25 0.0054939846 29.6 20 GTATCAA 2945 0.0 22.300508 2 GAGAGCG 45 0.0038234142 20.555555 7 ATACACC 45 0.0038234142 20.555555 4 TAGACTG 55 5.138605E-4 20.181818 5 GGCTTAG 55 5.138605E-4 20.181818 1 CGTCTGT 160 0.0 19.65625 34 GTATTGG 80 1.6142789E-5 18.5 1 GTACACT 50 0.0070305215 18.5 4 TAGGTAG 60 9.2288177E-4 18.5 5 CGTTGAC 70 1.21779216E-4 18.5 34 GCCGCAT 50 0.0070305215 18.5 35 TGATACC 335 0.0 17.119404 37 GTAATAC 65 0.0015785776 17.076923 3 TGCGTCT 175 7.2759576E-12 16.914286 32 TAATACT 90 4.4394616E-5 16.444445 4 TATACTG 125 1.6531703E-7 16.279999 5 GGACCCT 165 9.695214E-10 15.69697 6 CGTGGAT 295 0.0 15.677966 3 >>END_MODULE