##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088154_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2492225 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.011823170058882 31.0 31.0 33.0 28.0 34.0 2 31.154973567795846 31.0 31.0 34.0 28.0 34.0 3 31.197897862351915 31.0 31.0 34.0 28.0 34.0 4 35.15644695001455 35.0 35.0 37.0 32.0 37.0 5 35.01970448093571 35.0 35.0 37.0 32.0 37.0 6 35.084934145191546 37.0 35.0 37.0 32.0 37.0 7 34.912282799506464 36.0 35.0 37.0 32.0 37.0 8 34.981421821866 37.0 35.0 37.0 32.0 37.0 9 36.44049754737233 38.0 35.0 39.0 32.0 39.0 10 36.28888764056215 38.0 35.0 39.0 32.0 39.0 11 36.327404628394305 38.0 35.0 39.0 32.0 39.0 12 36.171397446057235 38.0 35.0 39.0 31.0 39.0 13 36.21743221418612 38.0 35.0 39.0 32.0 39.0 14 37.11388658728646 39.0 36.0 41.0 31.0 41.0 15 37.15934115097954 39.0 36.0 41.0 31.0 41.0 16 37.12927644975875 39.0 36.0 40.0 31.0 41.0 17 37.24821153788282 39.0 36.0 40.0 32.0 41.0 18 37.26024576432706 39.0 36.0 40.0 32.0 41.0 19 37.36310164611943 39.0 36.0 41.0 32.0 41.0 20 37.3277200092287 39.0 36.0 41.0 31.0 41.0 21 37.22844245603828 39.0 36.0 41.0 31.0 41.0 22 37.178771980860475 39.0 36.0 40.0 31.0 41.0 23 37.07095547151641 39.0 36.0 40.0 31.0 41.0 24 36.98952141159005 39.0 36.0 40.0 31.0 41.0 25 36.89689975824815 39.0 35.0 40.0 31.0 41.0 26 36.62514740844025 38.0 35.0 40.0 30.0 41.0 27 36.447881712124705 38.0 35.0 40.0 30.0 41.0 28 36.29104234168263 38.0 35.0 40.0 30.0 41.0 29 36.14377514068754 38.0 35.0 40.0 30.0 41.0 30 35.96223816067971 38.0 35.0 40.0 29.0 41.0 31 35.695391467463814 38.0 34.0 40.0 29.0 41.0 32 35.4337975102569 38.0 34.0 40.0 27.0 41.0 33 35.54779724944578 38.0 34.0 40.0 28.0 41.0 34 35.518892154600806 38.0 34.0 40.0 27.0 41.0 35 35.397180029892965 38.0 34.0 40.0 27.0 41.0 36 35.293825798232504 38.0 34.0 40.0 26.0 41.0 37 35.13745909779414 38.0 34.0 40.0 25.0 41.0 38 34.998572761287605 38.0 34.0 40.0 25.0 41.0 39 34.91725185326365 38.0 33.0 40.0 24.0 41.0 40 34.72326013903239 38.0 33.0 40.0 24.0 41.0 41 34.57691259818034 38.0 33.0 40.0 23.0 41.0 42 34.345943484235974 38.0 33.0 40.0 22.0 41.0 43 34.021569882334056 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 4.0 15 13.0 16 23.0 17 95.0 18 218.0 19 478.0 20 963.0 21 1959.0 22 3756.0 23 6409.0 24 10667.0 25 16558.0 26 24898.0 27 35558.0 28 49619.0 29 66122.0 30 84060.0 31 101761.0 32 122366.0 33 147787.0 34 178562.0 35 212386.0 36 265245.0 37 343798.0 38 421554.0 39 397364.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.852571497356784 23.137437430408568 14.203412613227137 21.806578459007515 2 17.56486673554755 23.467744685973376 36.60764979084954 22.359738787629528 3 20.07671859482992 26.625244510427432 32.54224638626127 20.75579050848138 4 12.67040495942381 15.85663413215099 35.53154309903801 35.9414178093872 5 10.674798623719768 41.32941447902978 34.69112941247279 13.304657484777657 6 31.159987561315695 36.30374464584859 15.441101826680978 17.09516596615474 7 24.018337028157568 35.915296572339976 21.378968592322124 18.687397807180332 8 27.940294315320646 33.48453690978945 20.26133274483644 18.313836030053466 9 25.13565187733852 13.477314447933072 24.17831455827624 37.208719116452166 10 16.23184102558958 27.94165855811574 33.775321249084655 22.051179167210023 11 31.072555648065485 21.588339736580767 25.743502292128518 21.59560232322523 12 20.24672732197133 27.647343237468526 32.14019600958982 19.965733430970317 13 31.34801231830994 20.742669702775633 29.489713007453176 18.419604971461247 14 20.75851899407156 22.49536057137698 29.183239876014405 27.56288055853705 15 22.84408510467554 28.788010713318418 27.876696526196472 20.491207655809568 16 21.317417167390584 28.49028478568347 27.81502472690066 22.377273320025278 17 18.89917643872443 27.02199841507087 28.543129131599276 25.535696014605424 18 20.001484617159367 26.218820531854064 33.543279599554616 20.236415251431954 19 19.175596103883077 24.4413325442125 35.169778009609885 21.213293342294538 20 24.223615444030937 23.205970568467933 33.6703548034387 18.900059184062435 21 23.49065593997332 24.316062955792514 32.2561967719608 19.93708433227337 22 21.53011866906078 23.841988584497788 33.35208498430118 21.275807762140257 23 20.447271012849964 26.02738516787208 34.4748568046625 19.050487014615456 24 18.933362758177932 25.037025148210933 32.82596876285247 23.20364333075866 25 20.324408911715437 26.17905686685592 33.945129352285605 19.551404869143035 26 21.863716157249044 24.97756021226013 32.39615203282208 20.76257159766875 27 20.337008095176 26.63058110724353 32.01364242795093 21.018768369629548 28 19.994904151912447 25.9864578840193 32.20002206863345 21.818615895434803 29 19.07777187051731 25.91387214236275 33.20097503235061 21.807380954769332 30 18.387545265776563 26.161361835307805 35.369759953455244 20.08133294546038 31 20.013642427950927 25.64319032190111 33.90095196059746 20.442215289550504 32 21.313685562098126 25.881892686254247 31.597307626719097 21.207114124928527 33 22.350389712004333 25.74851789063989 31.02536889727051 20.875723500085268 34 20.171974841757866 28.899758248151752 31.26078102900019 19.66748588109019 35 18.77117836471426 29.918566742569393 31.408841497055846 19.901413395660505 36 19.94988413967439 25.864879776103685 33.76870065904964 20.416535425172285 37 20.036553681950867 26.324308599745205 32.67497918526618 20.964158533037747 38 20.518091263830513 25.892405380734086 33.12068533138059 20.468818024054812 39 21.478277442847254 25.3955000050156 32.86011495751788 20.266107594619264 40 19.52913561175255 26.444963837534736 31.720410476582174 22.305490074130546 41 20.76875081503476 25.827804471907633 31.587035680967812 21.816409032089798 42 18.022530068513078 27.794039462729085 32.14043675831837 22.042993710439468 43 18.900019059274342 27.5182617941799 31.511280081052075 22.070439065493687 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 246.5 2 347.0 3 1011.5 4 1676.0 5 1676.0 6 3158.0 7 4640.0 8 5095.0 9 5550.0 10 8313.5 11 11077.0 12 11077.0 13 20577.0 14 30077.0 15 50920.0 16 71763.0 17 70683.0 18 69603.0 19 69603.0 20 73611.0 21 77619.0 22 61971.0 23 46323.0 24 49797.5 25 53272.0 26 53272.0 27 57665.5 28 62059.0 29 65312.5 30 68566.0 31 73275.5 32 77985.0 33 77985.0 34 84745.5 35 91506.0 36 98471.5 37 105437.0 38 109043.5 39 112650.0 40 112650.0 41 119031.0 42 125412.0 43 144888.5 44 164365.0 45 212090.5 46 259816.0 47 259816.0 48 262998.5 49 266181.0 50 238977.5 51 211774.0 52 195387.0 53 179000.0 54 179000.0 55 154381.5 56 129763.0 57 104553.5 58 79344.0 59 68144.5 60 56945.0 61 56945.0 62 49134.0 63 41323.0 64 35531.0 65 29739.0 66 25125.0 67 20511.0 68 20511.0 69 17306.0 70 14101.0 71 12118.0 72 10135.0 73 8029.0 74 5923.0 75 5923.0 76 4621.5 77 3320.0 78 2586.0 79 1852.0 80 1463.5 81 1075.0 82 1075.0 83 819.0 84 563.0 85 459.5 86 356.0 87 292.5 88 229.0 89 229.0 90 192.0 91 155.0 92 91.5 93 28.0 94 19.5 95 11.0 96 11.0 97 9.0 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2492225.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.77036081941598 #Duplication Level Percentage of deduplicated Percentage of total 1 73.55674617151692 29.253783359434227 2 13.751404235729003 10.937966164571753 3 5.124231205046992 6.113775718404888 4 2.416998952384231 3.844996817458851 5 1.308536632523195 2.6020487010435502 6 0.7886158062721175 1.8818121098002059 7 0.5207838262456636 1.4498232475094253 8 0.35573369283064077 1.13181258555983 9 0.24849440685517782 0.8894441000013459 >10 1.6436223023825616 12.582587708985695 >50 0.16899205114863053 4.666256061552796 >100 0.09794536119645054 7.132378109105946 >500 0.00874432161756368 2.3363730631655413 >1k 0.007422505559094747 5.89222796972695 >5k 8.134252667501092E-4 2.186025432640427 >10k+ 9.151034250938729E-4 7.098688851038612 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36153 1.4506314638525815 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35391 1.4200563753272677 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31836 1.2774127536638946 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 19633 0.7877699645898745 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11634 0.46681178465026235 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 10268 0.41200132411800705 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10260 0.41168032581327935 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 10200 0.4092728385278215 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10171 0.40810921967318364 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8470 0.3398569551304557 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 8007 0.32127917824433994 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7547 0.30282177572249697 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7378 0.2960406865351243 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6056 0.2429957166788713 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5817 0.23340589232513118 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5424 0.21763685060538274 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5360 0.2150688641675611 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4367 0.17522494959323495 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4342 0.17422182989096088 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4225 0.16952722968431821 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3622 0.14533198246546758 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3602 0.14452948670364835 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3535 0.14184112590155382 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3519 0.1411991292920984 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3401 0.1364644042973648 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2856 0.11459639478779003 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2811 0.1127907793236967 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2669 0.10709305941477996 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2642 0.10600969013632397 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2598 0.10424419946032161 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2513 0.10083359247258976 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2510 0.10071321810831686 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2497 0.10019159586313435 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.0124788090962895E-5 0.0 3 0.0 0.0 0.0 4.0124788090962895E-5 0.0 4 0.0 0.0 0.0 4.0124788090962895E-5 0.0 5 0.0 0.0 0.0 4.0124788090962895E-5 0.0 6 0.0 0.0 0.0 8.024957618192579E-5 0.0 7 0.0 0.0 0.0 8.024957618192579E-5 0.0 8 0.0 0.0 0.0 8.024957618192579E-5 0.0 9 0.0 0.0 0.0 8.024957618192579E-5 0.0 10 0.0 0.0 0.0 2.0062394045481448E-4 0.0 11 0.0 0.0 0.0 4.0124788090962896E-4 0.0 12 0.0 0.0 0.0 6.018718213644434E-4 0.0 13 0.0 0.0 0.0 6.419966094554063E-4 0.0 14 0.0 0.0 0.0 8.426205499102207E-4 0.0 15 0.0 0.0 0.0 0.0015648667355475528 0.0 16 0.0 0.0 0.0 0.0024074872854577736 0.0 17 0.0 0.0 0.0 0.0034908565639137717 0.0 18 0.0 0.0 0.0 0.004333477113823992 0.0 19 0.0 0.0 0.0 0.005416846392279991 0.0 20 0.0 0.0 0.0 0.006540340458826952 0.0 21 0.0 0.0 0.0 0.009028077320466652 0.0 22 0.0 4.0124788090962895E-5 0.0 0.014605422865110494 0.0 23 0.0 4.0124788090962895E-5 0.0 0.025840363530580106 0.0 24 0.0 4.0124788090962895E-5 0.0 0.04052603597187252 0.0 25 0.0 4.0124788090962895E-5 0.0 0.0468256277021537 0.0 26 0.0 4.0124788090962895E-5 0.0 0.05436908786325472 0.0 27 0.0 4.0124788090962895E-5 0.0 0.11130616216433106 0.0 28 0.0 4.0124788090962895E-5 0.0 0.1717340930293212 0.0 29 4.0124788090962895E-5 4.0124788090962895E-5 0.0 0.24584457663332965 0.0 30 4.0124788090962895E-5 4.0124788090962895E-5 0.0 0.39538966184834834 0.0 31 4.0124788090962895E-5 4.0124788090962895E-5 0.0 0.6003069546288958 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7690 0.0 30.985697 1 GTATTGG 850 0.0 24.594118 1 ATTGGAC 885 0.0 24.039547 3 TATATCG 60 3.7285354E-5 21.583334 5 TATTGGA 1075 0.0 20.651161 2 TAATACG 45 0.0038270438 20.555555 4 GGACCCT 1490 0.0 20.114094 6 TTGGACC 1555 0.0 19.273314 4 CGACGAG 110 3.856985E-8 18.5 24 TGGACCC 1590 0.0 18.267294 5 CGTCTGT 670 0.0 18.223879 34 GACCCTC 1535 0.0 18.198696 7 AGCCGTC 150 2.5102054E-10 17.266666 12 GTATCAA 14105 0.0 16.945763 2 TATACCG 165 5.4569682E-11 16.818182 5 CTGGTCG 70 0.002593633 15.857143 9 ACGTGCG 95 7.064969E-5 15.578948 9 GCGTTAT 110 1.4531432E-5 15.136364 1 CGAATTA 135 3.9772567E-7 15.074073 15 CCGAATT 135 3.9772567E-7 15.074073 14 >>END_MODULE