##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088148_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3411381 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63158556608013 31.0 31.0 34.0 30.0 34.0 2 31.801738357574248 31.0 31.0 34.0 30.0 34.0 3 31.897871272660545 31.0 31.0 34.0 30.0 34.0 4 35.598564921361756 37.0 35.0 37.0 33.0 37.0 5 35.49483860055503 37.0 35.0 37.0 33.0 37.0 6 35.51705306443343 37.0 35.0 37.0 33.0 37.0 7 35.380980898938 37.0 35.0 37.0 33.0 37.0 8 35.43597123862741 37.0 35.0 37.0 33.0 37.0 9 36.94933576753813 39.0 37.0 39.0 33.0 39.0 10 36.81946226469574 39.0 37.0 39.0 32.0 39.0 11 36.8892545277118 39.0 37.0 39.0 33.0 39.0 12 36.77855449156808 39.0 37.0 39.0 32.0 39.0 13 36.79479864606152 39.0 37.0 39.0 32.0 39.0 14 37.81607272831736 40.0 37.0 41.0 32.0 41.0 15 37.82176455810711 40.0 37.0 41.0 32.0 41.0 16 37.700966265568105 39.0 37.0 41.0 32.0 41.0 17 37.71633364904125 39.0 37.0 41.0 32.0 41.0 18 37.695022924733415 39.0 37.0 41.0 32.0 41.0 19 37.73131262676318 40.0 37.0 41.0 32.0 41.0 20 37.646846541034265 39.0 37.0 41.0 32.0 41.0 21 37.56150896074053 39.0 36.0 41.0 32.0 41.0 22 37.46272404049856 39.0 36.0 41.0 32.0 41.0 23 37.24130315552558 39.0 36.0 41.0 31.0 41.0 24 37.102440331349676 39.0 36.0 41.0 31.0 41.0 25 36.992242731023005 39.0 36.0 40.0 31.0 41.0 26 37.13083176578635 39.0 36.0 41.0 31.0 41.0 27 37.042517971460825 39.0 36.0 41.0 31.0 41.0 28 36.96132328813463 39.0 36.0 41.0 31.0 41.0 29 36.88085763507506 39.0 35.0 41.0 30.0 41.0 30 36.69313307425937 39.0 35.0 40.0 30.0 41.0 31 36.518050314520714 39.0 35.0 40.0 30.0 41.0 32 36.37405584424607 38.0 35.0 40.0 30.0 41.0 33 36.17229737751368 38.0 35.0 40.0 30.0 41.0 34 36.031763089493666 38.0 35.0 40.0 29.0 41.0 35 35.819737226653956 38.0 35.0 40.0 28.0 41.0 36 35.73045930665616 38.0 35.0 40.0 27.0 41.0 37 35.573746233563476 38.0 34.0 40.0 27.0 41.0 38 35.46416597852893 38.0 34.0 40.0 26.0 41.0 39 35.35960070129956 38.0 34.0 40.0 25.0 41.0 40 35.15922056199528 38.0 34.0 40.0 25.0 41.0 41 35.00936688103733 38.0 34.0 40.0 24.0 41.0 42 34.792785385156336 38.0 33.0 40.0 23.0 41.0 43 34.47583867061463 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 11.0 14 12.0 15 29.0 16 54.0 17 106.0 18 229.0 19 571.0 20 1131.0 21 2297.0 22 4339.0 23 7478.0 24 12391.0 25 19151.0 26 27787.0 27 39129.0 28 54091.0 29 70798.0 30 91098.0 31 113069.0 32 139801.0 33 173302.0 34 215021.0 35 264572.0 36 341996.0 37 471121.0 38 637928.0 39 723862.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.90598499551941 22.536650113253252 13.51948082023087 23.037884070996466 2 17.830432895065076 22.533718749093108 36.20354923709782 23.432299118743995 3 19.708206148770834 25.75769167970391 31.89116079382514 22.642941377700115 4 13.246717385129367 15.55710136158934 35.30033731207391 35.89584394120739 5 11.326292782893496 40.70955428314809 34.516519849292706 13.44763308466571 6 32.076686831520725 36.31130618362475 15.32986201189489 16.28214497295963 7 25.651810806239467 34.598773927626375 21.05156240244054 18.69785286369362 8 28.005901422327206 34.21661198206826 19.72224738309793 18.055239212506606 9 25.68147621154014 13.80370588919854 22.6223925149375 37.89242538432382 10 16.325734358020988 27.90104652631881 33.39829236312215 22.374926752538048 11 32.20730841849679 21.74655953116934 24.411081611816446 21.63505043851742 12 20.06281327122359 27.136839889768982 31.786745602440767 21.013601236566657 13 31.097464633824252 20.768920270119345 28.075638575697052 20.05797652035935 14 20.96239030468892 22.103365176742205 27.738091992656344 29.196152525912527 15 23.401783617836884 28.770166686160238 26.019638381054477 21.808411314948405 16 22.318234169680842 28.407322430417477 26.152136041093033 23.122307358808648 17 20.045371654470724 26.90329810713022 27.44348989456176 25.60784034383729 18 21.144486646317137 26.529461235786915 31.045403606340074 21.280648511555878 19 20.58096120017084 24.724942772443185 32.03327332830897 22.660822699077002 20 24.872302448773677 23.92925328481339 30.869961461355388 20.32848280505754 21 23.926615057069263 24.92207701221294 29.731155798780613 21.420152131937183 22 22.455128875959616 24.370423590915234 30.888722191980317 22.285725341144833 23 21.45814261145266 26.22386652209179 31.915285920863134 20.402704945592415 24 20.473790526475934 25.336220140758243 30.184315384297445 24.005673948468377 25 21.53479778424046 26.335170419252496 31.044641451658432 21.085390344848612 26 23.0002160415386 25.236846895729325 29.888394172330795 21.874542890401276 27 21.614120498413985 26.76473252328016 29.415770328790597 22.205376649515255 28 21.499533473393914 25.913552312098826 29.804733039200254 22.78218117530701 29 20.554256472671916 25.80462281990783 30.929292271956722 22.711828435463527 30 19.911027235011275 26.067507557789643 32.575048052387 21.446417154812085 31 21.303220015588995 25.51221924493336 31.544966686511998 21.639594052965645 32 22.24571222035885 25.616898259092142 29.788405340828245 22.348984179720762 33 23.200985172866943 25.543995232429328 29.407357313650984 21.847662281052745 34 21.44530323643123 28.05494314472643 29.578666235169866 20.921087383672475 35 20.389425865946958 28.917291853357924 29.676808307251523 21.0164739734436 36 21.222285051127386 25.44298042347073 31.680073260653092 21.654661264748793 37 21.256347502668273 25.87389095501206 30.916570151501695 21.95319139081797 38 21.39925150547535 25.298288288525967 31.81726110334788 21.485199102650803 39 22.358511113241235 24.726555022731265 31.731254878889224 21.183678985138275 40 20.816349742230493 25.407774739907385 30.838449296633826 22.937426221228293 41 21.77379190421709 25.083096845529713 30.601683013418906 22.54142823683429 42 19.503626244034308 26.743568074043917 31.011575663931996 22.741230017989782 43 20.269093367173003 26.35662800490476 30.559207546738403 22.815071081183838 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 205.0 1 382.5 2 560.0 3 1076.0 4 1592.0 5 1592.0 6 2991.0 7 4390.0 8 4932.5 9 5475.0 10 8964.0 11 12453.0 12 12453.0 13 24010.0 14 35567.0 15 54354.5 16 73142.0 17 69778.5 18 66415.0 19 66415.0 20 72751.0 21 79087.0 22 64598.5 23 50110.0 24 56243.0 25 62376.0 26 62376.0 27 69167.0 28 75958.0 29 81718.5 30 87479.0 31 94684.0 32 101889.0 33 101889.0 34 112061.0 35 122233.0 36 132768.0 37 143303.0 38 151283.0 39 159263.0 40 159263.0 41 168414.0 42 177565.0 43 201101.0 44 224637.0 45 280723.0 46 336809.0 47 336809.0 48 340747.0 49 344685.0 50 318668.5 51 292652.0 52 274638.5 53 256625.0 54 256625.0 55 226614.0 56 196603.0 57 166690.0 58 136777.0 59 121472.5 60 106168.0 61 106168.0 62 93956.0 63 81744.0 64 70723.5 65 59703.0 66 50870.0 67 42037.0 68 42037.0 69 35421.0 70 28805.0 71 23748.5 72 18692.0 73 15153.0 74 11614.0 75 11614.0 76 8987.5 77 6361.0 78 4969.5 79 3578.0 80 2832.5 81 2087.0 82 2087.0 83 1614.5 84 1142.0 85 877.0 86 612.0 87 495.5 88 379.0 89 379.0 90 379.5 91 380.0 92 251.5 93 123.0 94 93.0 95 63.0 96 63.0 97 44.5 98 26.0 99 21.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3411381.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.07386468597982 #Duplication Level Percentage of deduplicated Percentage of total 1 73.60896099104576 31.706224254038723 2 13.599735389875997 11.715863238972995 3 5.36289396187576 6.930017065172842 4 2.5022370295541605 4.311240768930559 5 1.3440489332411831 2.8946690940883117 6 0.8208683502858432 2.1214783347129536 7 0.5133739531165675 1.5479100132894705 8 0.36325657938831124 1.2517491797491203 9 0.2617166472992264 1.0145832706651665 >10 1.381007496116762 11.228348939740536 >50 0.14000524836987918 4.237584680429615 >100 0.0893342146659973 7.313294935740286 >500 0.0061440677438479455 1.8218713495733938 >1k 0.0053248587108728745 4.852364100932525 >5k 4.778719355911554E-4 1.527023244784906 >10k+ 6.144067743314855E-4 5.525777529178609 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 37104 1.0876533579802432 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35981 1.0547341384618136 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29979 0.8787936615699038 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 23735 0.6957592834104429 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15976 0.4683147382247834 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 12338 0.3616717100787042 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11933 0.34979968523011645 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 10484 0.3073242185496138 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10387 0.304480795314273 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 9214 0.27009589371577086 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8788 0.25760828239355266 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7793 0.22844120900010878 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7511 0.2201747620684995 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6835 0.20035874034591855 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6045 0.17720096348077216 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5744 0.16837755735873536 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4934 0.1446335076615599 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4721 0.13838970200045084 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4465 0.13088540975047935 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4283 0.12555032697901525 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4217 0.12361562663331946 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4137 0.12127053530520338 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3949 0.11575957068413055 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3804 0.11150909265192015 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3756 0.11010203785505049 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3683 0.10796214201814457 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3501 0.10262705924668045 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3442 0.10089755439219483 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 2.9313641601451142E-5 0.0 0.0 5.8627283202902284E-5 0.0 9 2.9313641601451142E-5 0.0 0.0 1.1725456640580457E-4 0.0 10 5.8627283202902284E-5 0.0 0.0 2.3450913281160914E-4 0.0 11 5.8627283202902284E-5 0.0 0.0 3.8107734081886484E-4 0.0 12 5.8627283202902284E-5 0.0 0.0 7.621546816377297E-4 0.0 13 5.8627283202902284E-5 0.0 0.0 8.794092480435342E-4 0.0 14 5.8627283202902284E-5 0.0 0.0 0.0011725456640580456 0.0 15 8.794092480435343E-5 0.0 0.0 0.001641563929681264 0.0 16 8.794092480435343E-5 0.0 0.0 0.002696855027333505 0.0 17 8.794092480435343E-5 0.0 0.0 0.0046901826562321825 0.0 18 8.794092480435343E-5 0.0 0.0 0.0050712599970510475 0.0 19 8.794092480435343E-5 0.0 0.0 0.005921355603493131 0.0 20 8.794092480435343E-5 0.0 0.0 0.007299096758761335 0.0 21 8.794092480435343E-5 0.0 0.0 0.010113206352500645 0.0 22 8.794092480435343E-5 0.0 0.0 0.018643476058522925 0.0 23 8.794092480435343E-5 0.0 0.0 0.029870600791878713 0.0 24 8.794092480435343E-5 0.0 0.0 0.04587584910627104 0.0 25 8.794092480435343E-5 0.0 0.0 0.05229553661698884 0.0 26 8.794092480435343E-5 0.0 0.0 0.05927218331813421 0.0 27 8.794092480435343E-5 0.0 0.0 0.09843520849767294 0.0 28 8.794092480435343E-5 0.0 0.0 0.16972598487240212 0.0 29 8.794092480435343E-5 0.0 0.0 0.25963092366405277 0.0 30 8.794092480435343E-5 0.0 0.0 0.42009379779039635 0.0 31 8.794092480435343E-5 0.0 0.0 0.6209215564019381 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9275 0.0 26.907278 1 CGCGTTA 45 0.0038273295 20.555555 35 GTATTGG 1575 0.0 20.320635 1 ATTGGAC 1550 0.0 19.812904 3 TTGGACC 2330 0.0 17.38841 4 TATTGGA 1870 0.0 16.917112 2 TATACCG 200 0.0 16.650002 5 GTATCAA 15115 0.0 16.547802 2 GTATCGT 80 3.385007E-4 16.1875 6 TGGACCC 2385 0.0 15.8239 5 CGTCTGT 855 0.0 15.578947 34 GGACCCT 2470 0.0 15.504049 6 ACCGTGT 195 4.1836756E-11 15.179487 8 GCGTTAT 165 1.6483682E-8 14.575757 1 TATACTG 550 0.0 14.463636 5 TGGACTG 520 0.0 14.230769 5 TAGACTG 360 0.0 13.875 5 TCGTAGA 95 0.0012459528 13.631579 2 TAGAACG 110 2.4585825E-4 13.454545 4 GACCCTC 2850 0.0 13.242105 7 >>END_MODULE