##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088144_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3293634 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.426880460913384 31.0 31.0 34.0 30.0 34.0 2 31.609517025874762 31.0 31.0 34.0 30.0 34.0 3 31.697626998021033 31.0 31.0 34.0 30.0 34.0 4 35.43002561911858 37.0 35.0 37.0 33.0 37.0 5 35.32368623836164 37.0 35.0 37.0 33.0 37.0 6 35.345164641851525 37.0 35.0 37.0 33.0 37.0 7 35.20161286894658 37.0 35.0 37.0 32.0 37.0 8 35.26315492249594 37.0 35.0 37.0 32.0 37.0 9 36.72016259244349 39.0 35.0 39.0 32.0 39.0 10 36.576367319501806 38.0 35.0 39.0 32.0 39.0 11 36.6538650013936 39.0 35.0 39.0 32.0 39.0 12 36.53080427272733 38.0 35.0 39.0 32.0 39.0 13 36.55305962957633 38.0 35.0 39.0 32.0 39.0 14 37.496771954625196 39.0 36.0 41.0 32.0 41.0 15 37.50906202692831 39.0 36.0 41.0 32.0 41.0 16 37.374543437431115 39.0 36.0 41.0 32.0 41.0 17 37.42231802319262 39.0 36.0 41.0 32.0 41.0 18 37.399040694867736 39.0 36.0 41.0 32.0 41.0 19 37.44763625830921 39.0 36.0 41.0 32.0 41.0 20 37.35795446610036 39.0 36.0 41.0 31.0 41.0 21 37.278253442853696 39.0 36.0 41.0 31.0 41.0 22 37.174240671550024 39.0 36.0 40.0 31.0 41.0 23 36.94233239030202 39.0 36.0 40.0 31.0 41.0 24 36.79101078018991 39.0 35.0 40.0 30.0 41.0 25 36.68604344016366 39.0 35.0 40.0 30.0 41.0 26 36.80762646972918 39.0 36.0 40.0 30.0 41.0 27 36.70131137825271 39.0 35.0 40.0 30.0 41.0 28 36.60024003881427 39.0 35.0 40.0 30.0 41.0 29 36.51385855258963 39.0 35.0 40.0 30.0 41.0 30 36.31014466088217 38.0 35.0 40.0 30.0 41.0 31 36.118933372681965 38.0 35.0 40.0 30.0 41.0 32 35.963661718333 38.0 35.0 40.0 29.0 41.0 33 35.74739209031726 38.0 34.0 40.0 28.0 41.0 34 35.59933799566072 38.0 34.0 40.0 27.0 41.0 35 35.37951484591184 38.0 34.0 40.0 27.0 41.0 36 35.28007787143319 38.0 34.0 40.0 26.0 41.0 37 35.11192743334566 38.0 34.0 40.0 25.0 41.0 38 34.97765841620532 38.0 33.0 40.0 25.0 41.0 39 34.85619227880208 38.0 33.0 40.0 24.0 41.0 40 34.63540939885853 38.0 33.0 40.0 23.0 41.0 41 34.4698910079262 38.0 33.0 40.0 23.0 41.0 42 34.23444043873727 38.0 33.0 40.0 21.0 41.0 43 33.906958393069786 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 7.0 14 18.0 15 26.0 16 68.0 17 113.0 18 325.0 19 711.0 20 1390.0 21 2879.0 22 5200.0 23 9115.0 24 14665.0 25 22338.0 26 32316.0 27 44711.0 28 60791.0 29 78354.0 30 99272.0 31 122344.0 32 148835.0 33 182588.0 34 221737.0 35 269455.0 36 345357.0 37 463609.0 38 605466.0 39 561939.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.14878398753474 23.46478084693078 14.13994390390675 22.246491261627735 2 18.287642160604367 23.165931612316363 35.57893803622382 22.967488190855452 3 20.17327972689133 25.974288582155758 32.08847734751342 21.763954343439494 4 13.58818253637168 15.925145295439627 34.958863067359644 35.52780910082905 5 11.185790528030742 41.26836800931737 34.089215741639784 13.456625721012111 6 31.905457619152582 36.54379934139616 15.040560062229137 16.510182977222122 7 25.164605417602566 35.169177874651524 20.80962851367213 18.85658819407378 8 28.423649986610535 34.06015968987447 19.503381371457788 18.01280895205721 9 25.521445309345243 13.641801123014883 23.00237366993418 37.834379897705695 10 16.596075945293254 28.34097534820202 32.779446653756914 22.283502052747817 11 32.15700348004666 21.694001215678487 24.274251480279837 21.874743823995015 12 19.977295595078264 27.715829992039186 31.35469818443701 20.95217622844554 13 31.35806832210258 20.77134253532724 28.302871539460668 19.567717603109514 14 20.867497724398035 22.333234354515408 28.028584839724147 28.770683081362407 15 23.43733395999677 28.953824256125603 26.145679817490347 21.46316196638728 16 22.142867118811623 28.34777634673434 26.411040206653198 23.09831632780084 17 19.774449741531694 26.966961113469196 27.639379481751767 25.619209663247343 18 20.85586923137179 26.34970977345995 31.675650664281456 21.118770330886797 19 20.25477026287681 24.486327260405982 32.89485109760222 22.364051379114983 20 24.76705061946774 23.80407173353202 31.512912485115223 19.91596516188502 21 24.031480121956477 24.616821419744877 30.29413711420273 21.057561344095912 22 22.371429248058526 24.07520082680711 31.433941961978775 22.11942796315559 23 21.28581985733691 26.193408253618948 32.41817396832799 20.102597920716146 24 20.194381039301877 25.16068877112636 30.802845732100163 23.842084457471596 25 21.233688989122655 26.246996478661565 31.728419126108122 20.790895406107662 26 22.77599757592981 25.11778782949168 30.422323791896734 21.68389080268178 27 21.282176465266026 26.71927117585014 30.076748053973212 21.921804304910626 28 21.24741243258966 26.01041888685871 30.25120581096746 22.490962869584173 29 20.14686513437741 25.94665952561821 31.41706091205034 22.489414427954046 30 19.559762863754745 26.101351880627906 33.13574003668896 21.203145218928395 31 20.973095371252544 25.500617251340007 32.151386583937374 21.37490079347007 32 21.987446085387752 25.62467475135367 30.20156459400164 22.186314569256936 33 22.988468056863635 25.70151996244877 29.7121659540799 21.59784602660769 34 21.210826703877846 28.336997978524632 29.874084370030186 20.578090947567336 35 20.00434778120459 29.129526838744074 30.09293078708806 20.77319459296327 36 20.910003965225037 25.409653895970223 32.2592309892356 21.42111114956914 37 20.903901283506304 25.918605406672384 31.438374755665023 21.73911855415629 38 21.14570107061076 25.29509957694146 32.2794821768296 21.279717175618178 39 22.21415615699862 24.830627811104694 32.113039882391305 20.842176149505377 40 20.51029349344827 25.564740951787602 31.176566673771283 22.74839888099285 41 21.469811156916645 25.191779050131252 30.991239463765556 22.347170329186547 42 19.152279822226756 26.894214718453842 31.36280473179473 22.590700727524673 43 19.853997135079368 26.544600887651754 30.884670245692142 22.716731731576733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 256.0 1 395.5 2 535.0 3 982.0 4 1429.0 5 1429.0 6 2734.5 7 4040.0 8 4658.5 9 5277.0 10 8794.5 11 12312.0 12 12312.0 13 24947.0 14 37582.0 15 60008.0 16 82434.0 17 76413.0 18 70392.0 19 70392.0 20 78047.5 21 85703.0 22 68157.5 23 50612.0 24 56193.5 25 61775.0 26 61775.0 27 67038.0 28 72301.0 29 77385.5 30 82470.0 31 88937.5 32 95405.0 33 95405.0 34 105312.0 35 115219.0 36 126524.5 37 137830.0 38 144359.5 39 150889.0 40 150889.0 41 160118.0 42 169347.0 43 192833.0 44 216319.0 45 272966.5 46 329614.0 47 329614.0 48 336019.5 49 342425.0 50 311717.5 51 281010.0 52 264173.0 53 247336.0 54 247336.0 55 215985.5 56 184635.0 57 155431.5 58 126228.0 59 111207.0 60 96186.0 61 96186.0 62 85171.5 63 74157.0 64 64191.5 65 54226.0 66 46114.0 67 38002.0 68 38002.0 69 31998.5 70 25995.0 71 21593.0 72 17191.0 73 13992.5 74 10794.0 75 10794.0 76 8258.5 77 5723.0 78 4532.5 79 3342.0 80 2640.0 81 1938.0 82 1938.0 83 1529.0 84 1120.0 85 849.0 86 578.0 87 486.5 88 395.0 89 395.0 90 385.0 91 375.0 92 243.5 93 112.0 94 108.0 95 104.0 96 104.0 97 56.5 98 9.0 99 10.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3293634.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.45153140935224 #Duplication Level Percentage of deduplicated Percentage of total 1 72.76890102383341 29.436134853896416 2 13.806670356572399 11.170019191749219 3 5.480656209423362 6.651028103980517 4 2.656093250056482 4.29772158123313 5 1.418420825248249 2.868864728210444 6 0.8601845048923423 2.087746831049442 7 0.5596711173241705 1.5847687646942161 8 0.37055385698657967 1.1991576787799396 9 0.28292179060122774 1.030015772900617 >10 1.5120041276711123 11.554465828961257 >50 0.15935554230242258 4.481451346254532 >100 0.10892685924276195 8.185905660668102 >500 0.008196242342245908 2.221936230125501 >1k 0.006165980477531709 5.300763347517095 >5k 6.015590709787033E-4 1.77428214649945 >10k+ 6.767539548510412E-4 6.155737933480075 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 42367 1.2863299322268351 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 41638 1.2641963253962036 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32060 0.9733929149383326 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 22601 0.6862025349507566 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16659 0.5057939042407261 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 12670 0.3846814794843628 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 12300 0.3734476872657982 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11116 0.3374995521663913 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10964 0.33288458887660255 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9509 0.2887084600171118 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 9282 0.2818163766830194 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7928 0.24070676948319092 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7811 0.2371544622140772 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6490 0.19704678783374233 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6342 0.19255327094631644 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5842 0.1773724706509588 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5127 0.15566392622859734 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4990 0.15150438694766935 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4642 0.14093854994210042 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4543 0.1379327514836196 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4319 0.1311317529512994 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4269 0.12961367292176362 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4179 0.12688112886859923 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4135 0.12554521844260777 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3914 0.11883530471205969 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3875 0.11765120228902179 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3795 0.11522227424176457 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3631 0.11024297174488724 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3544 0.10760151249349502 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3495 0.10611379406454999 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 6.07232011814306E-5 0.0 0.0 3.03616005907153E-5 0.0 7 6.07232011814306E-5 0.0 0.0 3.03616005907153E-5 0.0 8 6.07232011814306E-5 0.0 0.0 3.03616005907153E-5 0.0 9 6.07232011814306E-5 0.0 0.0 3.03616005907153E-5 0.0 10 6.07232011814306E-5 0.0 0.0 1.821696035442918E-4 0.0 11 6.07232011814306E-5 0.0 0.0 3.9470080767929893E-4 0.0 12 6.07232011814306E-5 0.0 0.0 6.375936124050213E-4 0.0 13 6.07232011814306E-5 0.0 0.0 6.983168135864519E-4 0.0 14 6.07232011814306E-5 0.0 0.0 8.501248165400285E-4 0.0 15 6.07232011814306E-5 0.0 0.0 0.0012751872248100427 0.0 16 6.07232011814306E-5 0.0 0.0 0.002307481644894363 0.0 17 6.07232011814306E-5 0.0 0.0 0.003825561674430128 0.0 18 6.07232011814306E-5 0.0 0.0 0.004645324890379441 0.0 19 6.07232011814306E-5 0.0 0.0 0.005465088106328754 0.0 20 6.07232011814306E-5 0.0 0.0 0.00704389133704595 0.0 21 6.07232011814306E-5 0.0 0.0 0.010292582600252486 0.0 22 6.07232011814306E-5 0.0 0.0 0.018368768357382756 0.0 23 6.07232011814306E-5 0.0 0.0 0.02869171255822596 0.0 24 6.07232011814306E-5 0.0 0.0 0.04451010646598863 0.0 25 6.07232011814306E-5 0.0 0.0 0.04976266336818238 0.0 26 6.07232011814306E-5 0.0 0.0 0.05659402350109332 0.0 27 6.07232011814306E-5 0.0 0.0 0.09700531388733538 0.0 28 6.07232011814306E-5 0.0 0.0 0.16793001286724632 0.0 29 6.07232011814306E-5 0.0 0.0 0.25807360502108007 0.0 30 6.07232011814306E-5 0.0 0.0 0.42579108668419136 0.0 31 6.07232011814306E-5 0.0 0.0 0.628667301831351 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9815 0.0 28.612328 1 GTATTGG 1525 0.0 19.288525 1 ATTGGAC 1585 0.0 18.441643 3 ACGTTTA 255 0.0 17.411764 26 GTATCAA 16320 0.0 17.20772 2 TTGGACC 2580 0.0 16.13372 4 CGAATTA 185 1.8189894E-11 16.0 15 CGTCTGT 880 0.0 15.767045 34 TATTGGA 1865 0.0 15.672923 2 TAGGGCG 75 0.0041065677 14.8 4 GGACCCT 2710 0.0 14.745388 6 TGGACCC 2810 0.0 14.418149 5 TGCGACG 155 1.2122291E-7 14.32258 22 CGCACTA 145 8.9237255E-7 14.034483 29 CGCGTAA 80 0.006301912 13.875 10 TTTTTAC 1955 0.0 13.721229 1 ATTCCGT 235 5.638867E-11 13.382979 29 CGCGCTA 265 1.8189894E-12 13.264152 24 CCGTCGT 170 3.737332E-7 13.058823 9 CGTTTAG 185 7.3965566E-8 13.0 26 >>END_MODULE