##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088142_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2921069 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60750464983881 31.0 31.0 34.0 30.0 34.0 2 31.77114474187361 31.0 31.0 34.0 30.0 34.0 3 31.859881776157977 31.0 31.0 34.0 30.0 34.0 4 35.565460453005386 37.0 35.0 37.0 33.0 37.0 5 35.46713480578514 37.0 35.0 37.0 33.0 37.0 6 35.49321258758352 37.0 35.0 37.0 33.0 37.0 7 35.349086584397696 37.0 35.0 37.0 33.0 37.0 8 35.413049469218286 37.0 35.0 37.0 33.0 37.0 9 36.90724662786124 39.0 37.0 39.0 33.0 39.0 10 36.78806286328738 39.0 37.0 39.0 32.0 39.0 11 36.85592466319693 39.0 37.0 39.0 33.0 39.0 12 36.7425391183844 39.0 35.0 39.0 32.0 39.0 13 36.76522533360218 39.0 37.0 39.0 32.0 39.0 14 37.76273172595375 40.0 37.0 41.0 32.0 41.0 15 37.7699735952831 40.0 37.0 41.0 32.0 41.0 16 37.6457502373275 39.0 36.0 41.0 32.0 41.0 17 37.68256929226937 39.0 37.0 41.0 32.0 41.0 18 37.66903589062771 39.0 37.0 41.0 32.0 41.0 19 37.70733796428636 39.0 37.0 41.0 32.0 41.0 20 37.62775442825897 39.0 37.0 41.0 32.0 41.0 21 37.555515121347696 39.0 36.0 41.0 32.0 41.0 22 37.453593187973304 39.0 36.0 41.0 32.0 41.0 23 37.236521629581496 39.0 36.0 41.0 31.0 41.0 24 37.088311505137334 39.0 36.0 41.0 31.0 41.0 25 36.983146238585945 39.0 36.0 40.0 31.0 41.0 26 37.09921299359926 39.0 36.0 41.0 31.0 41.0 27 36.996830954695014 39.0 36.0 41.0 31.0 41.0 28 36.90848863891952 39.0 35.0 41.0 31.0 41.0 29 36.821875484625664 39.0 35.0 41.0 30.0 41.0 30 36.62595987975635 39.0 35.0 40.0 30.0 41.0 31 36.44439244673782 39.0 35.0 40.0 30.0 41.0 32 36.297537648032275 38.0 35.0 40.0 30.0 41.0 33 36.071509094786876 38.0 35.0 40.0 30.0 41.0 34 35.93801618517057 38.0 35.0 40.0 29.0 41.0 35 35.71652124616023 38.0 35.0 40.0 27.0 41.0 36 35.62369666721327 38.0 35.0 40.0 27.0 41.0 37 35.453734232227994 38.0 34.0 40.0 26.0 41.0 38 35.31729308688018 38.0 34.0 40.0 25.0 41.0 39 35.191130028082185 38.0 34.0 40.0 25.0 41.0 40 34.979974112217135 38.0 34.0 40.0 24.0 41.0 41 34.812607644667075 38.0 33.0 40.0 23.0 41.0 42 34.58569585312774 38.0 33.0 40.0 23.0 41.0 43 34.265263504559464 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 7.0 13 10.0 14 11.0 15 16.0 16 31.0 17 101.0 18 215.0 19 542.0 20 1036.0 21 2066.0 22 3866.0 23 6837.0 24 10973.0 25 16866.0 26 25151.0 27 35230.0 28 47796.0 29 63404.0 30 79693.0 31 99774.0 32 122431.0 33 151548.0 34 186511.0 35 227475.0 36 292599.0 37 403859.0 38 533459.0 39 609560.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.848744072803484 22.71952494104042 13.839145874335731 22.592585111820366 2 17.93757696240657 22.66920089871208 36.06573483885523 23.32748730002612 3 19.708709380024917 25.91181516081955 32.05083481424095 22.328640644914586 4 13.037692707703927 15.500318547764532 35.06685394970129 36.39513479483025 5 11.041984971940067 41.2369238795797 34.21695961307316 13.50413153540707 6 31.835160347119494 36.313281199451296 15.325519527268955 16.526038926160254 7 25.393580226964858 35.147440885511436 20.78246011990816 18.676518767615555 8 28.483544894009693 33.96215563548824 19.570848891279187 17.983450579222882 9 25.63653922587929 13.6862908750187 22.837632387321214 37.83953751178079 10 16.35794977797512 28.168660172012373 32.88398870413537 22.589401345877143 11 31.970692920982007 21.729955711419347 24.585143315683403 21.71420805191524 12 20.058410123143275 27.449984919904324 31.654541539415877 20.837063417536523 13 31.33712349828094 20.718373992534925 28.39713817099151 19.547364338192626 14 20.82295899206763 22.203172879517737 28.14099906575298 28.832869062661647 15 23.402699491179426 28.716747190840064 26.568971838734377 21.311581479246126 16 22.132000305367658 28.381219341275404 26.444770732906342 23.042009620450596 17 19.7214102097554 26.98067043263956 27.574562600198764 25.72335675740628 18 20.829566162250874 26.35898022265136 31.743789687953278 21.06766392714448 19 20.21787229264355 24.489356465047557 32.87546442757771 22.417306814731184 20 24.926764824795306 23.43679659741006 31.652179390490264 19.984259187304374 21 23.838635787103968 24.697978719434563 30.43567269379806 21.027712799663412 22 22.33261179383301 23.919701999507716 31.72927445397558 22.018411752683694 23 21.085979139828602 26.002980415731365 32.712784258091816 20.198256186348218 24 19.98549161283078 25.06869916458666 31.04082786130694 23.904981361275617 25 21.215863096695077 26.18490011704619 31.97541721883324 20.623819567425485 26 22.7310960473717 24.981299654338873 30.62625360784014 21.661350690449286 27 21.40302060649714 26.619843625741126 30.13927435469686 21.837861413064875 28 21.00392014019525 25.751120565792867 30.530980267840302 22.713979026171582 29 19.99689154895006 25.705726225570157 31.93207692115455 22.36530530432523 30 19.426038891926208 25.891514373676213 33.62710706251718 21.055339671880397 31 20.801460013440284 25.493201290349525 32.31204055775471 21.393298138455478 32 22.183454071095206 25.527058758283356 30.411058417312294 21.878428753309148 33 23.144472109354485 25.404877460956932 29.95430782360841 21.49634260608017 34 21.18337499045726 28.147948576360232 30.16601114181144 20.50266529137107 35 20.048482250847208 28.925437913311875 30.345260587819052 20.680819248021873 36 20.766438588064847 25.256712525448734 32.63507298184329 21.34177590464313 37 21.01870924651215 25.632773481215267 31.6573829649351 21.691134307337485 38 21.088101650457418 25.090540483638012 32.59940110966225 21.22195675624232 39 22.183145964713603 24.5990423368979 32.345179110798135 20.872632587590363 40 20.54710107840657 25.228914483019743 31.34510003016019 22.878884408413494 41 21.44393028716542 24.994650930874965 31.199571115916807 22.36184766604281 42 19.10892895717287 26.74055285924434 31.63567858205335 22.51483960152944 43 20.04598316575199 26.312524627114254 31.038020669830118 22.603471537303637 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 190.0 1 328.0 2 466.0 3 942.5 4 1419.0 5 1419.0 6 2651.0 7 3883.0 8 4576.5 9 5270.0 10 8599.5 11 11929.0 12 11929.0 13 23430.0 14 34931.0 15 53774.5 16 72618.0 17 68363.5 18 64109.0 19 64109.0 20 69051.0 21 73993.0 22 58986.5 23 43980.0 24 48780.5 25 53581.0 26 53581.0 27 58994.0 28 64407.0 29 68941.5 30 73476.0 31 79006.0 32 84536.0 33 84536.0 34 93010.5 35 101485.0 36 110545.5 37 119606.0 38 126406.0 39 133206.0 40 133206.0 41 141170.0 42 149134.0 43 171394.5 44 193655.0 45 247827.0 46 301999.0 47 301999.0 48 302885.0 49 303771.0 50 275216.0 51 246661.0 52 230752.5 53 214844.0 54 214844.0 55 188201.0 56 161558.0 57 136176.0 58 110794.0 59 98962.5 60 87131.0 61 87131.0 62 76332.0 63 65533.0 64 56919.5 65 48306.0 66 40804.0 67 33302.0 68 33302.0 69 28007.0 70 22712.0 71 19259.5 72 15807.0 73 12889.5 74 9972.0 75 9972.0 76 7724.0 77 5476.0 78 4265.0 79 3054.0 80 2424.0 81 1794.0 82 1794.0 83 1386.5 84 979.0 85 750.5 86 522.0 87 458.5 88 395.0 89 395.0 90 375.5 91 356.0 92 235.0 93 114.0 94 95.0 95 76.0 96 76.0 97 46.5 98 17.0 99 19.5 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2921069.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.872163639060034 #Duplication Level Percentage of deduplicated Percentage of total 1 74.02745968535545 30.996899057291227 2 13.442191607212376 11.25707293289592 3 5.100286578025513 6.406801026035574 4 2.4282363141945327 4.067020332090458 5 1.282247363943994 2.684523572440814 6 0.8062450412108423 2.0255534579256653 7 0.5158701005898986 1.5120418087879013 8 0.3705255916477275 1.2411766564746545 9 0.2661091954105119 1.0028310998478802 >10 1.500915052756501 11.875813414282888 >50 0.1512239015368052 4.399499639152413 >100 0.09416347405006732 7.363417202769934 >500 0.007139944540788394 1.9828591000878533 >1k 0.006155124604122765 5.316524209762091 >5k 5.744782963847914E-4 1.864063496658617 >10k+ 6.565466244397615E-4 6.003902993496302 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36932 1.2643316539253266 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36771 1.2588199730988894 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29782 1.0195582507636758 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 23228 0.7951883368725629 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15873 0.5433969550188646 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11699 0.400504062040301 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 10422 0.3567871898952062 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10009 0.34264853038391085 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9046 0.3096811475524885 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8870 0.30365595609004786 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8670 0.2968091476100017 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7846 0.26860029667221147 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7562 0.25887782863054587 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6237 0.21351772245023995 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6014 0.2058835309949885 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4849 0.1660008715987195 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4759 0.16291980778269874 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4246 0.1453577440313803 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4077 0.13957219086574127 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3958 0.1354983398201138 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3819 0.1307398079264817 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3683 0.1260839781600503 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3604 0.12337948881043206 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3559 0.12183895690242169 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3486 0.11933987180720483 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3477 0.11903176542560276 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3458 0.11838131861999837 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3100 0.10612553144071571 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3099 0.10609129739831548 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2982 0.10208591443748848 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.423404240023087E-5 0.0 3 0.0 0.0 0.0 3.423404240023087E-5 0.0 4 0.0 0.0 0.0 3.423404240023087E-5 0.0 5 0.0 0.0 0.0 3.423404240023087E-5 0.0 6 3.423404240023087E-5 0.0 0.0 3.423404240023087E-5 0.0 7 3.423404240023087E-5 0.0 0.0 3.423404240023087E-5 0.0 8 3.423404240023087E-5 0.0 0.0 3.423404240023087E-5 0.0 9 3.423404240023087E-5 0.0 0.0 1.0270212720069263E-4 0.0 10 3.423404240023087E-5 0.0 0.0 3.4234042400230875E-4 0.0 11 3.423404240023087E-5 0.0 0.0 6.846808480046175E-4 0.0 12 3.423404240023087E-5 0.0 0.0 9.585531872064645E-4 0.0 13 3.423404240023087E-5 0.0 0.0 0.0012666595688085424 0.0 14 3.423404240023087E-5 0.0 3.423404240023087E-5 0.0016089999928108512 0.0 15 3.423404240023087E-5 0.0 3.423404240023087E-5 0.002464851052816623 0.0 16 3.423404240023087E-5 0.0 3.423404240023087E-5 0.00390268083362632 0.0 17 3.423404240023087E-5 0.0 3.423404240023087E-5 0.0066756382680450204 0.0 18 3.423404240023087E-5 0.0 3.423404240023087E-5 0.007599957412851254 0.0 19 3.423404240023087E-5 0.0 3.423404240023087E-5 0.009106255278461413 0.0 20 3.423404240023087E-5 0.0 3.423404240023087E-5 0.01174227654327919 0.0 21 3.423404240023087E-5 0.0 3.423404240023087E-5 0.01643234035211082 0.0 22 3.423404240023087E-5 0.0 3.423404240023087E-5 0.02711336158098285 0.0 23 3.423404240023087E-5 0.0 3.423404240023087E-5 0.044743893417101756 0.0 24 3.423404240023087E-5 0.0 3.423404240023087E-5 0.06867348905486313 0.0 25 3.423404240023087E-5 0.0 3.423404240023087E-5 0.07644461667971554 0.0 26 3.423404240023087E-5 0.0 3.423404240023087E-5 0.08318872303256103 0.0 27 6.846808480046175E-5 0.0 3.423404240023087E-5 0.1233110207256316 0.0 28 6.846808480046175E-5 0.0 3.423404240023087E-5 0.20040608421095155 0.0 29 6.846808480046175E-5 0.0 3.423404240023087E-5 0.29547401995639266 0.0 30 6.846808480046175E-5 0.0 3.423404240023087E-5 0.47674327446561515 0.0 31 6.846808480046175E-5 0.0 3.423404240023087E-5 0.694985294767087 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8820 0.0 28.589 1 GTATTGG 1285 0.0 22.459145 1 ATTGGAC 1325 0.0 21.362265 3 TTGGACC 2020 0.0 18.957922 4 ACGTTTA 130 6.9849193E-10 18.5 26 TATTGGA 1635 0.0 18.330276 2 TGGACCC 2055 0.0 18.274939 5 GGACCCT 2025 0.0 18.271605 6 ACGGACC 280 0.0 17.839287 8 TATACCG 160 3.45608E-11 17.34375 5 GTATCAA 14870 0.0 16.944855 2 CGGTATA 210 0.0 15.857142 26 GACCCTC 2380 0.0 15.546219 7 CGGACCA 275 0.0 15.472728 9 TATTCCG 85 5.3676654E-4 15.235295 5 GACGGAC 305 0.0 15.163934 7 TTTTTAC 1715 0.0 14.994169 1 CGTCTGT 790 0.0 14.987342 34 TCTATAC 285 0.0 14.929824 3 CTAACGG 100 1.09428074E-4 14.799999 27 >>END_MODULE