##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088140_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 663601 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.580805333325298 31.0 31.0 34.0 30.0 34.0 2 31.759245389925574 31.0 31.0 34.0 30.0 34.0 3 31.85426332992265 31.0 31.0 34.0 30.0 34.0 4 35.58130412702814 37.0 35.0 37.0 33.0 37.0 5 35.46501436857389 37.0 35.0 37.0 33.0 37.0 6 35.4939293340426 37.0 35.0 37.0 33.0 37.0 7 35.3573321920853 37.0 35.0 37.0 33.0 37.0 8 35.38213474663239 37.0 35.0 37.0 33.0 37.0 9 36.90221684415786 39.0 37.0 39.0 33.0 39.0 10 36.76655399856239 39.0 35.0 39.0 32.0 39.0 11 36.847287752730935 39.0 37.0 39.0 33.0 39.0 12 36.727721929291846 39.0 35.0 39.0 32.0 39.0 13 36.74139128783712 39.0 35.0 39.0 32.0 39.0 14 37.744358432250706 39.0 37.0 41.0 32.0 41.0 15 37.75622851683467 39.0 37.0 41.0 32.0 41.0 16 37.63214793226653 39.0 36.0 41.0 32.0 41.0 17 37.64977448798299 39.0 37.0 41.0 32.0 41.0 18 37.631894768091065 39.0 36.0 41.0 32.0 41.0 19 37.6646463763617 39.0 37.0 41.0 32.0 41.0 20 37.589553059745235 39.0 36.0 41.0 32.0 41.0 21 37.50469634614776 39.0 36.0 41.0 32.0 41.0 22 37.41716332555255 39.0 36.0 41.0 32.0 41.0 23 37.20184870125271 39.0 36.0 41.0 31.0 41.0 24 37.05548062766633 39.0 36.0 41.0 31.0 41.0 25 36.95736444037908 39.0 36.0 40.0 31.0 41.0 26 37.05286459785323 39.0 36.0 41.0 31.0 41.0 27 36.97868297365435 39.0 36.0 41.0 31.0 41.0 28 36.88401916211699 39.0 35.0 41.0 30.0 41.0 29 36.79012689854295 39.0 35.0 40.0 30.0 41.0 30 36.62281853101487 39.0 35.0 40.0 30.0 41.0 31 36.478600845990286 39.0 35.0 40.0 30.0 41.0 32 36.332259897136986 38.0 35.0 40.0 30.0 41.0 33 36.157367152852395 38.0 35.0 40.0 30.0 41.0 34 36.01038425198274 38.0 35.0 40.0 29.0 41.0 35 35.81667598451479 38.0 35.0 40.0 28.0 41.0 36 35.71195492472133 38.0 35.0 40.0 27.0 41.0 37 35.57586863190381 38.0 34.0 40.0 27.0 41.0 38 35.47079344365063 38.0 34.0 40.0 26.0 41.0 39 35.38528422952949 38.0 34.0 40.0 26.0 41.0 40 35.18741080860336 38.0 34.0 40.0 25.0 41.0 41 35.06240647618072 38.0 34.0 40.0 24.0 41.0 42 34.87560296021254 38.0 34.0 40.0 24.0 41.0 43 34.553100432338105 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 0.0 15 1.0 16 2.0 17 22.0 18 52.0 19 99.0 20 209.0 21 429.0 22 849.0 23 1391.0 24 2257.0 25 3557.0 26 5312.0 27 7441.0 28 10117.0 29 13925.0 30 17742.0 31 22503.0 32 27981.0 33 34499.0 34 42946.0 35 53468.0 36 68188.0 37 92722.0 38 123822.0 39 134062.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.594875535148375 22.77226827566565 13.656851029458966 22.976005159727006 2 17.63047373346333 22.579230591876744 36.63195203141647 23.158343643243455 3 19.39885563764973 26.090376596780295 32.031446607223316 22.479321158346657 4 13.259473689762372 15.778005156713146 35.820922512172224 35.14159864135225 5 11.337083578837284 40.5219401417418 34.94283462502317 13.19814165439775 6 31.691784671813334 36.80253646392938 15.59702290985095 15.908655954406337 7 25.29788231181086 34.55555371375269 21.626549688743687 18.520014285692756 8 27.475696992620563 34.56715707179465 19.962748699896473 17.99439723568831 9 25.395531350917196 13.935030236542742 22.876849191004837 37.79258922153523 10 16.150970236633157 27.93998200726039 33.755524780704064 22.15352297540239 11 32.15200097649039 21.97359557927128 24.496949220992736 21.377454223245596 12 19.726763522056174 27.30059177126014 31.983224859516486 20.9894198471672 13 30.704143001592826 21.228418884239176 28.108908817195875 19.958529296972127 14 20.743790319785536 22.194511460953194 27.860717509467285 29.20098070979399 15 23.103190019303767 29.243325431999047 25.933957302656264 21.719527246040922 16 22.17235959560037 28.63527933200824 26.26261865187063 22.929742420520764 17 19.88107311471803 27.23036885116207 27.59278542377121 25.29577261034869 18 20.983392128703844 26.937421733843074 30.938018477970953 21.14116765948213 19 20.401114525143875 25.350172769480455 31.86809543686643 22.38061726850924 20 24.50267555353292 24.499360308378076 30.698718054975803 20.299246083113196 21 23.81024139505516 25.308882898006484 29.564452133134218 21.316423573804137 22 22.305120094755733 24.897340419921008 30.66044204273351 22.13709744258975 23 21.316724959727306 26.63091224998154 31.735636323634232 20.316726466656924 24 20.43381489780757 25.727206559363232 30.203390290249715 23.63558825257949 25 21.458979115462455 26.589471685545984 30.864932391602785 21.08661680738878 26 22.77588490674366 25.816266099659284 29.77557297231318 21.632276021283875 27 21.47058247350441 27.131363575401483 29.466200322181553 21.931853628912553 28 21.33480811511737 26.391009055140064 29.793656127703244 22.480526702039327 29 20.512627316715918 26.22750719182159 30.850767253213906 22.409098238248585 30 19.960337612511132 26.55842893545971 32.13195881259974 21.349274639429417 31 21.10665897127943 25.94360165219763 31.495733128792754 21.454006247730188 32 21.984746858428483 26.075608686545078 29.731419934569114 22.208224520457325 33 22.850779308650832 26.090979368626634 29.40426551497059 21.653975807751948 34 21.270311527559482 28.312495008295645 29.56294520351838 20.85424826062649 35 20.422211539765613 28.982626608459 29.656374839700362 20.93878701207503 36 21.038244366720363 25.895379904490802 31.396125081185833 21.670250647603005 37 21.104097190932503 26.151256553260165 30.821984897551392 21.92266135825594 38 21.186375547957283 25.66029888442001 31.685907646311563 21.46741792131115 39 22.11358934058267 25.04064942638724 31.76532283706625 21.080438395963842 40 20.70551430754324 25.768496430837207 30.864329619756447 22.661659641863107 41 21.50509116170711 25.35981711902182 30.726596252868816 22.40849546640225 42 19.379566938567 26.996644067745528 30.974636867635823 22.64915212605165 43 20.015641929412403 26.52768757129661 30.626234740453977 22.830435758837012 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35.0 1 58.0 2 81.0 3 179.5 4 278.0 5 278.0 6 517.5 7 757.0 8 833.0 9 909.0 10 1569.5 11 2230.0 12 2230.0 13 4288.5 14 6347.0 15 9773.5 16 13200.0 17 12849.5 18 12499.0 19 12499.0 20 13781.5 21 15064.0 22 12629.5 23 10195.0 24 11491.0 25 12787.0 26 12787.0 27 14426.5 28 16066.0 29 17336.0 30 18606.0 31 20110.5 32 21615.0 33 21615.0 34 23662.0 35 25709.0 36 27744.0 37 29779.0 38 31738.5 39 33698.0 40 33698.0 41 35259.5 42 36821.0 43 41176.0 44 45531.0 45 55465.0 46 65399.0 47 65399.0 48 65868.0 49 66337.0 50 60688.5 51 55040.0 52 51715.0 53 48390.0 54 48390.0 55 42381.5 56 36373.0 57 30530.0 58 24687.0 59 21893.5 60 19100.0 61 19100.0 62 16658.5 63 14217.0 64 12326.0 65 10435.0 66 8907.5 67 7380.0 68 7380.0 69 6223.0 70 5066.0 71 4354.5 72 3643.0 73 2964.0 74 2285.0 75 2285.0 76 1781.5 77 1278.0 78 1018.0 79 758.0 80 603.5 81 449.0 82 449.0 83 330.5 84 212.0 85 178.5 86 145.0 87 114.5 88 84.0 89 84.0 90 78.0 91 72.0 92 49.0 93 26.0 94 19.0 95 12.0 96 12.0 97 7.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 663601.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.48726398457789 #Duplication Level Percentage of deduplicated Percentage of total 1 82.21152756529045 46.43904260155964 2 10.37619720968419 11.722459818789426 3 3.0454846739394292 5.16093290213408 4 1.2869507786113825 2.9078531346631693 5 0.7165613166368722 2.0238294127001852 6 0.453357940507972 1.5365369798987025 7 0.3097685218302364 1.224858338671593 8 0.23439069954305325 1.0592071456494663 9 0.17473891882763312 0.8883471092576615 >10 1.0649915177192433 11.20463877670182 >50 0.0767958923889878 2.990491885789777 >100 0.04013719974510884 4.521482349111143 >500 0.005084045301039362 2.01648378750565 >1k 0.003210975979603808 3.5099907438315125 >5k 8.02743994900952E-4 2.7938450137361843 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6711 1.0113004651891724 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6426 0.9683529711377771 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5347 0.8057552655888102 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4056 0.6112106521840684 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2648 0.3990349622740171 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2373 0.35759439783846014 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2076 0.3128385882480587 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1911 0.2879742495867246 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1890 0.28480969739346385 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1582 0.2383962652256401 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1582 0.2383962652256401 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1406 0.21187430398688367 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1329 0.20027094594492773 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1282 0.1931883767504871 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1087 0.16380324924163767 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 993 0.1496381108527564 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 922 0.13893891058030353 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 816 0.12296545665241614 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 796 0.11995159742073927 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 794 0.11965021149757159 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 774 0.11663635226589472 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 771 0.11618427338114319 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 770 0.11603358041955933 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 705 0.10623853791660953 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 695 0.10473160830077109 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 691 0.10412883645443571 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 1.506929615838433E-4 0.0 7 0.0 0.0 0.0 1.506929615838433E-4 0.0 8 0.0 0.0 0.0 1.506929615838433E-4 0.0 9 0.0 0.0 0.0 4.520788847515299E-4 0.0 10 0.0 0.0 0.0 7.534648079192165E-4 0.0 11 0.0 0.0 0.0 7.534648079192165E-4 0.0 12 0.0 0.0 0.0 0.0012055436926707464 0.0 13 0.0 0.0 0.0 0.0013562366542545898 0.0 14 0.0 0.0 0.0 0.001506929615838433 0.0 15 0.0 0.0 0.0 0.002561780346925336 0.0 16 0.0 0.0 0.0 0.0036166310780122394 0.0 17 0.0 0.0 0.0 0.0061784114249375756 0.0 18 0.0 0.0 0.0 0.006781183271272949 0.0 19 0.0 0.0 0.0 0.008589498810279069 0.0 20 0.0 0.0 0.0 0.010397814349285188 0.0 21 0.0 0.0 0.0 0.014315831350465115 0.0 22 0.0 0.0 0.0 0.024562952738166458 0.0 23 0.0 0.0 0.0 0.03797462631912851 0.0 24 0.0 0.0 0.0 0.05861956205611504 0.0 25 0.0 0.0 0.0 0.06690767494322643 0.0 26 0.0 0.0 0.0 0.07474370894558628 0.0 27 0.0 0.0 0.0 0.11949951853598774 0.0 28 0.0 0.0 0.0 0.19831193744433778 0.0 29 0.0 0.0 0.0 0.29249503843423985 0.0 30 0.0 0.0 0.0 0.4638329357550697 0.0 31 0.0 0.0 0.0 0.6796252567431333 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1695 0.0 27.831856 1 AAGACCG 40 0.0019303311 23.125002 5 ATTGGAC 315 0.0 22.90476 3 GTATTGG 285 0.0 22.7193 1 ATTACGT 50 2.700435E-4 22.199999 17 GTGTTAC 45 0.0038241292 20.555557 1 CTGTGCG 45 0.0038241292 20.555557 9 ACGTTAA 55 5.139947E-4 20.181818 20 AATTACG 55 5.139947E-4 20.181818 16 CCGCTAG 65 6.8965135E-5 19.923077 36 CTTAACG 60 9.2312077E-4 18.5 30 CACCTCG 50 0.0070318263 18.499998 31 ACCGTGG 50 0.0070318263 18.499998 8 TAGTACT 100 2.8703835E-7 18.499998 4 TAGCACT 85 2.7203074E-5 17.411764 4 TATTGGA 385 0.0 17.2987 2 TACCCTA 75 2.0656086E-4 17.266666 5 GCCGCTA 75 2.0656086E-4 17.266666 35 TAAACAG 140 1.8644641E-9 17.178572 5 TTGGACC 485 0.0 17.16495 4 >>END_MODULE