##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088137_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1272207 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.006329158698232 31.0 31.0 33.0 30.0 34.0 2 31.18540143231408 31.0 31.0 34.0 28.0 34.0 3 31.207036276329244 31.0 31.0 34.0 28.0 34.0 4 34.98456619087931 35.0 35.0 37.0 32.0 37.0 5 34.844820850694894 35.0 35.0 37.0 32.0 37.0 6 34.95286616093136 35.0 35.0 37.0 32.0 37.0 7 34.777682405457604 35.0 35.0 37.0 32.0 37.0 8 34.892223513940735 35.0 35.0 37.0 32.0 37.0 9 36.22601982224591 38.0 35.0 39.0 32.0 39.0 10 36.031017751042086 37.0 35.0 39.0 31.0 39.0 11 36.19306999568467 38.0 35.0 39.0 32.0 39.0 12 36.00534740022653 37.0 35.0 39.0 30.0 39.0 13 36.08483996708083 38.0 35.0 39.0 31.0 39.0 14 36.854374327448284 38.0 36.0 40.0 31.0 41.0 15 36.92334502168279 38.0 36.0 40.0 31.0 41.0 16 36.7317244756553 38.0 36.0 40.0 31.0 41.0 17 36.828406855173725 38.0 36.0 40.0 31.0 41.0 18 36.83170348850462 38.0 36.0 40.0 31.0 41.0 19 36.90155611468888 39.0 36.0 40.0 31.0 41.0 20 36.828498035304 39.0 36.0 40.0 31.0 41.0 21 36.77757864875763 39.0 36.0 40.0 30.0 41.0 22 36.66453808224605 38.0 35.0 40.0 30.0 41.0 23 36.41765058673628 38.0 35.0 40.0 30.0 41.0 24 36.26098347202932 38.0 35.0 40.0 30.0 41.0 25 36.13928236521258 38.0 34.0 40.0 29.0 41.0 26 36.19215819438189 38.0 35.0 40.0 30.0 41.0 27 36.037075727456305 38.0 35.0 40.0 29.0 41.0 28 35.90070405209215 38.0 34.0 40.0 29.0 41.0 29 35.80546797808847 38.0 34.0 40.0 29.0 41.0 30 35.565126587104146 38.0 34.0 40.0 27.0 41.0 31 35.318118042111074 38.0 34.0 40.0 27.0 41.0 32 35.15369118390325 37.0 34.0 40.0 27.0 41.0 33 34.90171017766763 37.0 33.0 40.0 26.0 41.0 34 34.730535989819266 37.0 33.0 40.0 25.0 41.0 35 34.46223688440639 37.0 33.0 40.0 24.0 41.0 36 34.349380250226574 37.0 33.0 40.0 24.0 41.0 37 34.14368259253408 37.0 33.0 40.0 24.0 41.0 38 33.96902626695184 37.0 33.0 40.0 23.0 41.0 39 33.798486409837395 37.0 33.0 40.0 21.0 41.0 40 33.52376303541798 37.0 32.0 40.0 20.0 41.0 41 33.30618602161441 37.0 32.0 40.0 18.0 41.0 42 33.017340731500454 37.0 31.0 40.0 16.0 41.0 43 32.63929219065765 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 4.0 14 6.0 15 14.0 16 30.0 17 71.0 18 190.0 19 482.0 20 902.0 21 1756.0 22 3086.0 23 5170.0 24 8101.0 25 11779.0 26 16816.0 27 22638.0 28 30018.0 29 38115.0 30 46865.0 31 56973.0 32 67896.0 33 81546.0 34 97808.0 35 115999.0 36 147755.0 37 187545.0 38 214496.0 39 116141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.99342402612154 25.897829519881594 16.173311418660642 19.93543503533623 2 19.952020386619473 24.954429585751374 33.33050360515231 21.763046422476844 3 22.175557908422135 25.634271781243147 32.56789186036549 19.622278449969226 4 15.248933546191775 17.36211166893438 32.82382505362728 34.565129731246564 5 10.578860201209395 42.778730190920186 33.348818234768395 13.293591373102018 6 32.20262111433124 36.912860878772086 13.793431414856231 17.091086592040448 7 23.428891681935408 37.05442589138403 20.211962361471052 19.304720065209512 8 28.65398476820203 34.78828523974479 19.244745548483856 17.312984443569324 9 24.82779924965041 13.648093431336253 23.83338560470112 37.69072171431221 10 16.866673426572877 29.813858908180823 32.24019361629043 21.07927404895587 11 32.082043252395245 21.700556591812497 23.86915022476688 22.34824993102538 12 19.18194130357717 29.32415872574196 31.25615564133824 20.23774432934263 13 31.85228504480796 20.8844944258285 29.40189764715962 17.86132288220392 14 20.33277603408879 23.034616222045624 29.34553889422083 27.28706884964475 15 23.43580879526681 29.592747092257788 26.925492470957952 20.045951641517455 16 21.22657712149045 28.26513295399255 27.80766023139316 22.70062969312384 17 18.971047950530064 27.597474310391313 28.878948158593687 24.552529580484936 18 19.78923241264983 25.718220383946957 33.82460558698388 20.66794161641934 19 19.333567571943874 24.338256274332714 35.478581708794245 20.849594444929167 20 23.879604498324568 23.307134766590657 34.224540503235716 18.588720231849063 21 23.50238601108153 23.84525474234932 32.496598430915725 20.15576081565343 22 21.338901609565113 23.740004574727223 33.57896946015861 21.342124355549057 23 20.280268855618623 26.26074215909832 34.676668183715385 18.78232080156767 24 19.060656009595924 24.879441788954157 33.1665365777739 22.893365623676022 25 20.115358585513206 26.135133669284947 34.0685124354763 19.680995309725542 26 21.613542450245912 24.721527235740727 32.82099532544625 20.84393498856711 27 20.66754859861642 26.287781783939252 32.34984558330523 20.6948240341391 28 20.31729113265373 26.05204970574757 32.49887793417266 21.13178122742604 29 19.02984341384696 25.558497948840085 33.62055074370759 21.791107893605364 30 18.402822811067697 25.878807458220244 35.63075820208504 20.087611528627022 31 19.785538045302374 24.994989023012764 34.391808880158656 20.827664051526206 32 20.956102269520606 25.787155706579195 32.341828020125654 20.91491400377454 33 22.26720966006318 25.665477394795026 31.50304942513286 20.56426352000893 34 20.457362677614572 28.464235772952044 31.840494510720347 19.23790703871304 35 18.891658354340134 28.954171766072662 32.10035788201134 20.053811997575867 36 19.87121592633903 24.978718085971856 34.67179476295917 20.478271224729937 37 19.660322573291925 25.76781923067551 33.76101530647135 20.81084288956121 38 20.511284720175254 25.01055252800841 34.21416483323861 20.26399791857772 39 21.6017519161583 24.858061620475283 33.716368484059586 19.823817979306828 40 19.891259834287975 25.55724029187074 32.642015017996286 21.909484855844997 41 20.43951966936198 25.338014961401722 32.61481818603419 21.607647183202104 42 18.18194680582641 26.933274223455772 32.73885460463588 22.145924366081935 43 18.967274979622026 26.731498883436423 32.30716384990807 21.99406228703348 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 97.0 1 150.0 2 203.0 3 316.0 4 429.0 5 429.0 6 1027.0 7 1625.0 8 2022.0 9 2419.0 10 4072.0 11 5725.0 12 5725.0 13 12256.5 14 18788.0 15 32011.5 16 45235.0 17 40248.0 18 35261.0 19 35261.0 20 39885.0 21 44509.0 22 34157.5 23 23806.0 24 25271.5 25 26737.0 26 26737.0 27 28421.0 28 30105.0 29 31353.5 30 32602.0 31 34626.5 32 36651.0 33 36651.0 34 40110.5 35 43570.0 36 47150.0 37 50730.0 38 52979.5 39 55229.0 40 55229.0 41 58948.5 42 62668.0 43 72828.0 44 82988.0 45 107819.0 46 132650.0 47 132650.0 48 134582.5 49 136515.0 50 121974.0 51 107433.0 52 98343.0 53 89253.0 54 89253.0 55 76381.0 56 63509.0 57 52274.5 58 41040.0 59 36194.5 60 31349.0 61 31349.0 62 27318.0 63 23287.0 64 19990.0 65 16693.0 66 14106.5 67 11520.0 68 11520.0 69 9592.0 70 7664.0 71 6294.0 72 4924.0 73 4031.5 74 3139.0 75 3139.0 76 2432.0 77 1725.0 78 1299.5 79 874.0 80 705.0 81 536.0 82 536.0 83 420.5 84 305.0 85 237.5 86 170.0 87 137.0 88 104.0 89 104.0 90 96.5 91 89.0 92 56.5 93 24.0 94 19.5 95 15.0 96 15.0 97 10.5 98 6.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1272207.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.665630836053836 #Duplication Level Percentage of deduplicated Percentage of total 1 79.76401387012761 38.0200203913538 2 11.541453867474512 11.002613587167719 3 3.6389027107244205 5.203517797731174 4 1.5530562031037574 2.9610961457914855 5 0.8130808130260998 1.9378004936790292 6 0.503367611324106 1.4396000841720642 7 0.33731849881799175 1.125494932718118 8 0.24560285038176055 0.9365451838863651 9 0.1937386664868216 0.8311208179887175 >10 1.2307288124436802 11.232167864293778 >50 0.10021414174324016 3.292836264398253 >100 0.06265225671293309 5.626174425676968 >500 0.00859608621795314 3.008657918850955 >1k 0.005785827262083844 5.374500152659191 >5k 9.91856102071516E-4 3.0970667443741133 >10k+ 4.95928051035758E-4 4.91078719525831 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23908 1.87925392644436 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23118 1.817157113582931 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15297 1.202398666254784 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8473 0.6660079688289721 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8146 0.6403046045179754 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6354 0.4994470239512909 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6121 0.4811323943351986 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5165 0.40598739041681114 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5046 0.39663356670730476 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4536 0.35654575080942014 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4350 0.3419254885407799 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3559 0.27975007211876685 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3291 0.25868431788223145 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3082 0.24225617372015718 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2861 0.22488478683107388 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2446 0.19226430918867762 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2414 0.18974899524998684 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2284 0.17953053237405547 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2027 0.15932941730394504 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2016 0.15846477813752008 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1991 0.1564996891229179 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1981 0.155713653517077 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1931 0.15178347548787263 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1921 0.1509974398820318 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1902 0.14950397223093412 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1902 0.14950397223093412 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1758 0.13818505950682552 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1751 0.13763483458273693 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1492 0.11727651239145831 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1471 0.11562583761919247 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1449 0.11389655928634254 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 1412 0.11098822754473131 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1365 0.10729386019727923 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1351 0.10619341034910199 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1320 0.10375669997099528 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1298 0.10202742163814536 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 7.860356058408734E-5 0.0 0.0 7.860356058408734E-5 0.0 10 7.860356058408734E-5 0.0 0.0 3.930178029204367E-4 0.0 11 7.860356058408734E-5 0.0 0.0 7.074320452567861E-4 0.0 12 7.860356058408734E-5 0.0 0.0 9.432427270090481E-4 0.0 13 7.860356058408734E-5 0.0 0.0 0.0011004498481772228 0.0 14 1.5720712116817467E-4 0.0 0.0 0.0015720712116817468 0.0 15 1.5720712116817467E-4 0.0 0.0 0.0018078818934340087 0.0 16 1.5720712116817467E-4 0.0 0.0 0.0025153139386907947 0.0 17 1.5720712116817467E-4 0.0 0.0 0.003930178029204367 0.0 18 1.5720712116817467E-4 0.0 0.0 0.004716213635045241 0.0 19 1.5720712116817467E-4 0.0 0.0 0.006052474164974725 0.0 20 1.5720712116817467E-4 0.0 0.0 0.007545941816072385 0.0 21 1.5720712116817467E-4 0.0 0.0 0.009982652194179093 0.0 22 1.5720712116817467E-4 0.0 0.0 0.01855044029784461 0.0 23 1.5720712116817467E-4 0.0 0.0 0.03018376726428954 0.0 24 1.5720712116817467E-4 0.0 0.0 0.044411011730009345 0.0 25 1.5720712116817467E-4 0.0 0.0 0.0496774502891432 0.0 26 1.5720712116817467E-4 0.0 0.0 0.057223392105215584 0.0 27 1.5720712116817467E-4 0.0 0.0 0.09888327921478188 0.0 28 1.5720712116817467E-4 0.0 0.0 0.17127715851272632 0.0 29 1.5720712116817467E-4 0.0 0.0 0.256483418185877 0.0 30 1.5720712116817467E-4 0.0 0.0 0.4448961529059343 0.0 31 1.5720712116817467E-4 0.0 0.0 0.6627852228450244 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4675 0.0 31.064173 1 GTATTGG 360 0.0 24.152777 1 ATTGGAC 385 0.0 23.545454 3 TACGTTG 65 6.902873E-5 19.923077 5 GTATCAA 7450 0.0 19.41879 2 TTGGACC 660 0.0 19.340908 4 TATTGGA 465 0.0 19.096773 2 ATAGGCG 60 9.2375564E-4 18.5 5 TTTTTAC 910 0.0 18.296705 1 CGTCTGT 340 0.0 17.955883 34 GGACCCT 665 0.0 17.80451 6 CCTAGTA 85 2.7234853E-5 17.411764 2 GTGCTAG 65 0.0015800596 17.076923 1 GTACTCA 65 0.0015800596 17.076923 6 CGTCAAT 65 0.0015800596 17.076923 24 TGGACCC 695 0.0 17.03597 5 ACAGTCC 110 7.8092125E-7 16.818182 8 CGTGTCT 110 7.8092125E-7 16.818182 35 AGCACCG 80 3.3829213E-4 16.1875 5 CCGTATA 70 0.0025926982 15.857142 2 >>END_MODULE