##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088135_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1558073 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.590750240842375 31.0 31.0 34.0 30.0 34.0 2 31.759810355483985 31.0 31.0 34.0 30.0 34.0 3 31.852372128905387 31.0 31.0 34.0 30.0 34.0 4 35.5590880529988 37.0 35.0 37.0 33.0 37.0 5 35.47701808580214 37.0 35.0 37.0 33.0 37.0 6 35.51325451374871 37.0 35.0 37.0 33.0 37.0 7 35.35828873229945 37.0 35.0 37.0 33.0 37.0 8 35.435801146672844 37.0 35.0 37.0 33.0 37.0 9 36.907200111933136 39.0 37.0 39.0 33.0 39.0 10 36.798933682824874 39.0 37.0 39.0 32.0 39.0 11 36.876844024638125 39.0 37.0 39.0 33.0 39.0 12 36.75186400123743 39.0 35.0 39.0 32.0 39.0 13 36.75511994624129 39.0 35.0 39.0 32.0 39.0 14 37.71683419197945 39.0 37.0 41.0 32.0 41.0 15 37.70950077435396 39.0 37.0 41.0 32.0 41.0 16 37.59346577471017 39.0 36.0 41.0 32.0 41.0 17 37.66601629063593 39.0 37.0 41.0 32.0 41.0 18 37.6643520553915 39.0 37.0 41.0 32.0 41.0 19 37.724614957065555 39.0 37.0 41.0 32.0 41.0 20 37.65064281326998 39.0 37.0 41.0 32.0 41.0 21 37.57326967350053 39.0 36.0 41.0 32.0 41.0 22 37.48629685515377 39.0 36.0 41.0 32.0 41.0 23 37.25156202565605 39.0 36.0 41.0 31.0 41.0 24 37.09485948347735 39.0 36.0 41.0 31.0 41.0 25 36.99861174668966 39.0 36.0 41.0 31.0 41.0 26 37.12238001685415 39.0 36.0 41.0 31.0 41.0 27 37.010169613362145 39.0 36.0 41.0 31.0 41.0 28 36.92150688703289 39.0 35.0 41.0 31.0 41.0 29 36.82982761398215 39.0 35.0 40.0 30.0 41.0 30 36.62066026431368 39.0 35.0 40.0 30.0 41.0 31 36.40366080408299 38.0 35.0 40.0 30.0 41.0 32 36.24439612264637 38.0 35.0 40.0 30.0 41.0 33 36.015179006375185 38.0 35.0 40.0 30.0 41.0 34 35.87046434923139 38.0 35.0 40.0 29.0 41.0 35 35.64048218536615 38.0 35.0 40.0 27.0 41.0 36 35.53422272255536 38.0 34.0 40.0 27.0 41.0 37 35.36175583557382 38.0 34.0 40.0 26.0 41.0 38 35.20953703709647 38.0 34.0 40.0 25.0 41.0 39 35.07182847016796 38.0 34.0 40.0 25.0 41.0 40 34.817975794458924 38.0 33.0 40.0 24.0 41.0 41 34.61930731101816 38.0 33.0 40.0 23.0 41.0 42 34.357738052068164 38.0 33.0 40.0 21.0 41.0 43 34.01482279713466 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 5.0 14 6.0 15 7.0 16 15.0 17 45.0 18 105.0 19 236.0 20 543.0 21 1065.0 22 2027.0 23 3557.0 24 5808.0 25 8841.0 26 13290.0 27 18914.0 28 25385.0 29 33543.0 30 42510.0 31 52887.0 32 65501.0 33 81748.0 34 101414.0 35 124599.0 36 161746.0 37 224590.0 38 286053.0 39 303631.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.53937139017235 23.403717284106715 14.359853485683919 21.697057840037022 2 17.828368760642153 23.035441856703763 36.451886400701376 22.684302981952705 3 19.754851024310156 26.090626048972034 32.82779433312816 21.326728593589646 4 12.815253200588161 15.528476521960139 35.21503806304326 36.44123221440844 5 10.485773131297442 41.9377654320433 34.147116341788866 13.429345094870396 6 31.264838040322886 36.63948993404032 15.139983813338656 16.95568821229814 7 24.654878173230653 36.025205494222675 20.39269020129352 18.927226131253157 8 28.788766636736536 33.634560126515254 19.46526253904663 18.111410697701583 9 25.423840859831344 13.643070639180577 23.6223206486474 37.31076785234068 10 16.464440369610408 28.59320455460046 32.662975354813284 22.279379720975847 11 31.282680593271305 21.826448439835616 24.974824671244544 21.916046295648535 12 20.09854480502518 28.19476365998256 31.484211587005227 20.222479947987033 13 31.701659678333428 21.009991187832664 28.7280506112358 18.560298522598107 14 20.741005074858496 22.780383204124583 28.525685253515082 27.952926467501843 15 23.083257331331716 29.176168253990664 27.0371799010701 20.703394513607513 16 21.56811651315439 28.88856940592642 26.79508598120884 22.748228099710346 17 19.017209078136904 27.30597346850886 27.838939510536413 25.837877942817826 18 20.243082320276393 26.623720454689863 32.70989228360931 20.42330494142444 19 19.412633426033313 24.597563785522244 34.04461793510317 21.945184853341274 20 24.917895374606967 23.551848982685662 32.50297001488377 19.027285627823602 21 23.836944738789516 24.636907256591954 31.12299616256748 20.403151842051045 22 21.875932642437164 24.051568828931636 32.395016151361325 21.67748237726987 23 20.686963961252136 26.45864474899443 33.63218539824514 19.222205891508292 24 19.18080860139416 25.40586994319265 31.665846208746316 23.747475246666877 25 20.568227547746478 26.630973003190476 32.88972981368652 19.911069635376517 26 22.45190052070731 25.202926948865684 31.199565103817346 21.145607426609665 27 20.631639210743014 27.112593569107478 30.839633316282356 21.41613390386715 28 20.460081138688622 26.28952558705529 31.094242695945567 22.156150578310516 29 19.24640244712539 26.230735016908707 32.46927454618621 22.053587989779682 30 18.58609962434366 26.42026400560179 34.5983788949555 20.39525747509905 31 20.139236094842797 25.930363981661962 33.215452677762855 20.714947245732386 32 21.588911430979167 26.077404588873566 30.926920625670302 21.406763354476972 33 22.807724670153455 25.960529448876912 30.364110025653485 20.86763585531615 34 20.429594762247984 29.293813576128976 30.515258270953925 19.761333390669115 35 18.95411832436606 30.197814864900423 30.847527683234354 20.000539127499163 36 20.0979029865738 25.78768773991976 33.45677641548246 20.657632858023984 37 20.190517389108212 26.37649198721754 32.37807214424485 21.054918479429396 38 20.537484443925287 25.711888980811555 33.304922169885494 20.44570440537767 39 21.752639317926693 25.31068826685271 33.00962150040467 19.92705091481593 40 19.738933926715884 26.07708367964787 31.897093396779226 22.286888996857016 41 20.869304583289743 25.596040750337117 31.878416479844013 21.656238186529126 42 18.12642924946392 27.525475378881474 32.32197721159407 22.026118160060538 43 19.031008174841617 27.222986342745177 31.780603347853404 21.965402134559806 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 165.0 2 245.0 3 520.5 4 796.0 5 796.0 6 1521.5 7 2247.0 8 2620.0 9 2993.0 10 4883.5 11 6774.0 12 6774.0 13 13439.0 14 20104.0 15 33084.0 16 46064.0 17 42967.5 18 39871.0 19 39871.0 20 43115.0 21 46359.0 22 36623.5 23 26888.0 24 30005.0 25 33122.0 26 33122.0 27 35466.0 28 37810.0 29 39484.5 30 41159.0 31 43712.5 32 46266.0 33 46266.0 34 50602.5 35 54939.0 36 58844.0 37 62749.0 38 65623.0 39 68497.0 40 68497.0 41 72056.5 42 75616.0 43 87787.5 44 99959.0 45 131801.0 46 163643.0 47 163643.0 48 165806.5 49 167970.0 50 151080.5 51 134191.0 52 125082.5 53 115974.0 54 115974.0 55 99821.5 56 83669.0 57 68200.0 58 52731.0 59 45692.0 60 38653.0 61 38653.0 62 33715.0 63 28777.0 64 24825.0 65 20873.0 66 17522.0 67 14171.0 68 14171.0 69 11866.0 70 9561.0 71 7913.0 72 6265.0 73 5149.0 74 4033.0 75 4033.0 76 3138.5 77 2244.0 78 1678.0 79 1112.0 80 883.0 81 654.0 82 654.0 83 534.0 84 414.0 85 314.5 86 215.0 87 169.0 88 123.0 89 123.0 90 142.0 91 161.0 92 107.0 93 53.0 94 41.5 95 30.0 96 30.0 97 18.0 98 6.0 99 6.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1558073.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.57850577586831 #Duplication Level Percentage of deduplicated Percentage of total 1 77.7488804992784 34.65928918404377 2 12.374415413091292 11.032658979309678 3 4.0638840046741365 5.434856297244744 4 1.7839050372500518 3.1809528402660803 5 0.9736457915561717 2.1701837271268336 6 0.5758975777136898 1.5403592096650973 7 0.3934409979852103 1.2277308260802962 8 0.2698905867851695 0.9625055265484131 9 0.20827495141766458 0.8356127512266948 >10 1.376469528607106 11.95881039138257 >50 0.13743743040430448 4.2084757191744915 >100 0.07809467180689074 6.560971229014079 >500 0.007086348275821195 2.3088335413644305 >1k 0.007086348275821195 5.852509113591796 >5k 0.0010123354679744566 2.96616095844068 >10k+ 5.784774102711181E-4 5.100089705520306 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24298 1.559490473167817 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22718 1.4580831578494717 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18978 1.2180430570326295 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13115 0.8417448989874031 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9034 0.5798187889784369 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6976 0.44773255168403536 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6683 0.4289272710585447 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6326 0.40601435234420985 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6193 0.39747816694083016 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5674 0.36416778931410787 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5123 0.3288035926429635 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4849 0.3112177670750985 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4606 0.2956215787065176 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3716 0.2384997365335257 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3651 0.23432791659954316 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3313 0.2126344529428339 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3123 0.20043990236657716 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2764 0.17739861996196585 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2641 0.16950425300996808 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2451 0.15730970243371137 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2313 0.14845260780464073 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2270 0.14569278846369843 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2260 0.14505097001231648 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2234 0.14338224203872346 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2201 0.1412642411491631 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2196 0.14094333192347214 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2164 0.13888951287904996 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1937 0.12432023403268011 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1790 0.11488550279736573 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1780 0.1142436843459838 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1769 0.11353768404946366 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1679 0.10776131798702629 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1588 0.10192077007945072 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1577 0.10121476978293058 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.2836369027638628E-4 0.0 10 0.0 0.0 0.0 1.9254553541457942E-4 0.0 11 0.0 0.0 0.0 3.8509107082915884E-4 0.0 12 0.0 0.0 0.0 8.343639867965108E-4 0.0 13 0.0 0.0 0.0 0.0010269095222110902 0.0 14 6.418184513819314E-5 0.0 0.0 0.001283636902763863 0.0 15 6.418184513819314E-5 0.0 0.0 0.0020538190444221805 0.0 16 6.418184513819314E-5 0.0 0.0 0.003594183327738816 0.0 17 6.418184513819314E-5 0.0 0.0 0.006225638978404734 0.0 18 6.418184513819314E-5 0.0 0.0 0.006931639274924859 0.0 19 6.418184513819314E-5 0.0 0.0 0.008022730642274142 0.0 20 1.2836369027638628E-4 0.0 0.0 0.010461640757525481 0.0 21 1.2836369027638628E-4 0.0 0.0 0.014440915156093456 0.0 22 1.2836369027638628E-4 0.0 0.0 0.023618919010855076 0.0 23 1.2836369027638628E-4 0.0 0.0 0.03844492523777769 0.0 24 1.2836369027638628E-4 0.0 0.0 0.05923984306255227 0.0 25 1.2836369027638628E-4 0.0 0.0 0.06572220942150978 0.0 26 1.9254553541457942E-4 0.0 0.0 0.07380912190892211 0.0 27 1.9254553541457942E-4 0.0 0.0 0.11892895904107188 0.0 28 1.9254553541457942E-4 0.0 0.0 0.19690990088397656 0.0 29 1.9254553541457942E-4 0.0 0.0 0.29324685043640447 0.0 30 1.9254553541457942E-4 0.0 0.0 0.48001601978854647 0.0 31 1.9254553541457942E-4 0.0 0.0 0.7069630241971975 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCACG 25 0.0054969373 29.599998 17 GGTATCA 5510 0.0 28.53902 1 GTATTGG 740 0.0 20.75 1 CATACCG 50 0.0070359795 18.499998 17 CGTCTGT 445 0.0 18.292135 34 ATTGGAC 820 0.0 18.27439 3 TTGGACC 1155 0.0 17.939394 4 AGTACCG 75 2.0678605E-4 17.266666 5 GGACCCT 1160 0.0 17.224138 6 TTTTTAC 1110 0.0 17.0 1 CGGTATA 120 1.04188075E-7 16.958334 26 GTATCAA 9345 0.0 16.807384 2 TATTGGA 895 0.0 16.536314 2 GGACTTT 360 0.0 16.444445 3 AACGTGA 80 3.3835307E-4 16.1875 6 ACCGTGT 80 3.3835307E-4 16.1875 8 TGGACCC 1220 0.0 16.07377 5 TAAACGT 70 0.002593048 15.857143 4 GGCGTCG 95 7.0622504E-5 15.578948 8 GGTCGGT 145 5.3489202E-8 15.310345 23 >>END_MODULE