##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1724317 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52411708519953 31.0 31.0 34.0 30.0 34.0 2 31.701521819943782 31.0 31.0 34.0 30.0 34.0 3 31.79984422817846 31.0 31.0 34.0 30.0 34.0 4 35.5297755575106 37.0 35.0 37.0 33.0 37.0 5 35.40176951221846 37.0 35.0 37.0 33.0 37.0 6 35.42280450752385 37.0 35.0 37.0 33.0 37.0 7 35.30017972333393 37.0 35.0 37.0 32.0 37.0 8 35.31683907309387 37.0 35.0 37.0 32.0 37.0 9 36.84005609177431 39.0 37.0 39.0 33.0 39.0 10 36.68237278876216 39.0 35.0 39.0 32.0 39.0 11 36.77400327202017 39.0 35.0 39.0 32.0 39.0 12 36.658293689617395 39.0 35.0 39.0 32.0 39.0 13 36.678671033226486 39.0 35.0 39.0 32.0 39.0 14 37.69000595598141 39.0 37.0 41.0 32.0 41.0 15 37.6954144742527 39.0 37.0 41.0 32.0 41.0 16 37.57700701205173 39.0 36.0 41.0 32.0 41.0 17 37.585711328021475 39.0 36.0 41.0 32.0 41.0 18 37.5652249557361 39.0 36.0 41.0 32.0 41.0 19 37.5907324465281 39.0 37.0 41.0 32.0 41.0 20 37.513101709256475 39.0 36.0 41.0 32.0 41.0 21 37.43081927511009 39.0 36.0 41.0 32.0 41.0 22 37.35815978152509 39.0 36.0 41.0 32.0 41.0 23 37.158628604833105 39.0 36.0 40.0 31.0 41.0 24 37.034707075323155 39.0 36.0 40.0 31.0 41.0 25 36.94024126654206 39.0 36.0 40.0 31.0 41.0 26 37.04477482968619 39.0 36.0 40.0 31.0 41.0 27 36.951882397494195 39.0 36.0 40.0 31.0 41.0 28 36.872987971469286 39.0 36.0 40.0 30.0 41.0 29 36.779468044448905 39.0 35.0 40.0 30.0 41.0 30 36.62438635123356 39.0 35.0 40.0 30.0 41.0 31 36.49685991612911 39.0 35.0 40.0 30.0 41.0 32 36.36073761379143 38.0 35.0 40.0 30.0 41.0 33 36.19957641199385 38.0 35.0 40.0 30.0 41.0 34 36.07858473818909 38.0 35.0 40.0 29.0 41.0 35 35.90416147378933 38.0 35.0 40.0 29.0 41.0 36 35.80848533071355 38.0 35.0 40.0 28.0 41.0 37 35.6782859532209 38.0 35.0 40.0 27.0 41.0 38 35.590209920797626 38.0 34.0 40.0 27.0 41.0 39 35.52608424089074 38.0 34.0 40.0 26.0 41.0 40 35.360241765290255 38.0 34.0 40.0 25.0 41.0 41 35.24443823264516 38.0 34.0 40.0 25.0 41.0 42 35.08755350669279 38.0 34.0 40.0 24.0 41.0 43 34.775759329636024 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 3.0 14 5.0 15 13.0 16 23.0 17 52.0 18 108.0 19 238.0 20 524.0 21 1038.0 22 1948.0 23 3565.0 24 5887.0 25 9201.0 26 13611.0 27 19609.0 28 26718.0 29 35808.0 30 46656.0 31 59043.0 32 73481.0 33 90811.0 34 111845.0 35 138267.0 36 175559.0 37 236243.0 38 324001.0 39 350058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.41101491199124 22.672919190612863 13.494096503137184 23.421969394258713 2 17.628835069189712 22.712935034567312 36.29837205107877 23.3598578451642 3 19.379731221115374 26.072642095391974 31.84356472736742 22.704061956125237 4 13.202386800106941 16.089732920338893 36.312464587427954 34.395415692126214 5 11.42881500327376 40.404461592618986 35.1754346793542 12.991288724753048 6 31.47240327619573 37.410812513012395 15.798603157076105 15.31818105371576 7 25.508128725750545 34.29862374493785 22.01654336180644 18.17670416750516 8 27.26714403442059 34.88320303053325 20.147629467203537 17.70202346784263 9 25.57302398572884 14.09050655998868 22.485076699933945 37.85139275434853 10 15.625607124444056 28.166688607721202 34.435605518010895 21.772098749823844 11 32.232182365539515 22.29798813095272 24.418537890654676 21.051291612853092 12 19.604979826795187 27.25589320293194 32.28327505905237 20.855851911220498 13 30.30365066284216 21.191637036577383 27.905715712366113 20.598996588214348 14 20.671663041076556 22.30581731781337 28.102373287510357 28.920146353599712 15 23.115587215111837 29.23899723774689 25.932296671667682 21.713118875473594 16 22.04339457303964 28.878912636133613 26.358726382677894 22.718966408148848 17 20.027291965456467 27.665446666709197 27.83931260899243 24.467948758841906 18 20.95183194273443 27.136715580719788 30.775025705830195 21.136426770715595 19 20.605201943726126 25.860790098340384 31.57273285596558 21.96127510196791 20 23.989440456714163 25.044292899739435 30.77258995880688 20.193676684739522 21 23.197938662090557 25.86606755022423 29.681897238152843 21.254096549532367 22 22.099996694343325 25.3225480001647 30.72816657261977 21.849288732872203 23 21.34827876776718 26.80191635296758 31.230974351003905 20.618830528261334 24 20.532187527003444 26.215597248069816 29.942638157600953 23.309577067325787 25 21.542674577818346 26.8684934382715 30.587589172988494 21.001242810921656 26 22.35685201734948 26.193965494743715 29.716635630223443 21.73254685768336 27 21.42564273274578 27.42111804268009 29.355275161121764 21.79796406345237 28 21.441533082374065 26.581945199171614 29.665832906594318 22.31068881186 29 20.522618520840425 26.64121504340559 30.762151042992674 22.07401539276131 30 20.29725392720712 26.721826671081946 31.858585167344522 21.12233423436642 31 21.155390801111395 26.54030552386829 30.908411852345015 21.3958918226753 32 21.817276057708646 26.51014865596059 29.806004348388377 21.866570937942384 33 22.54388259235396 26.432784690981993 29.419996439169825 21.60333627749422 34 21.33528811697617 28.223522704931863 29.519862067125707 20.921327110966256 35 20.467292267025147 28.80671013508537 29.775093558782984 20.9509040391065 36 21.24632535664846 26.25822282097781 31.056122511115998 21.439329311257733 37 21.33714392423203 26.31354907479309 30.58271767894187 21.766589322033013 38 21.302057568300956 26.075599788205995 31.273831899818884 21.34851074367416 39 21.966842523735487 25.75500908475646 31.24715467051592 21.03099372099214 40 20.83972958568523 26.11944323462565 30.549835094127126 22.490992085561995 41 21.49714930607307 25.81190117594387 30.474210948450892 22.21673856953217 42 19.76092563026404 27.14495072541766 30.74533278973646 22.348790854581843 43 20.475759387630003 26.73011980975656 30.33340157291264 22.460719229700803 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 146.5 2 196.0 3 398.0 4 600.0 5 600.0 6 1199.5 7 1799.0 8 2043.0 9 2287.0 10 3639.0 11 4991.0 12 4991.0 13 9802.0 14 14613.0 15 22614.0 16 30615.0 17 30104.0 18 29593.0 19 29593.0 20 33329.0 21 37065.0 22 32650.5 23 28236.0 24 32208.5 25 36181.0 26 36181.0 27 40397.0 28 44613.0 29 48747.5 30 52882.0 31 57836.5 32 62791.0 33 62791.0 34 68649.0 35 74507.0 36 80970.5 37 87434.0 38 90362.0 39 93290.0 40 93290.0 41 96863.5 42 100437.0 43 108689.5 44 116942.0 45 137580.5 46 158219.0 47 158219.0 48 160679.0 49 163139.0 50 149504.0 51 135869.0 52 126420.5 53 116972.0 54 116972.0 55 104364.0 56 91756.0 57 79042.5 58 66329.0 59 58856.5 60 51384.0 61 51384.0 62 45403.0 63 39422.0 64 33782.5 65 28143.0 66 23970.0 67 19797.0 68 19797.0 69 16575.0 70 13353.0 71 11039.0 72 8725.0 73 6996.0 74 5267.0 75 5267.0 76 3996.5 77 2726.0 78 2251.0 79 1776.0 80 1394.0 81 1012.0 82 1012.0 83 763.5 84 515.0 85 410.0 86 305.0 87 251.5 88 198.0 89 198.0 90 173.0 91 148.0 92 96.0 93 44.0 94 38.5 95 33.0 96 33.0 97 21.5 98 10.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1724317.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.98654867914297 #Duplication Level Percentage of deduplicated Percentage of total 1 80.76504027148529 46.02520899003938 2 11.75018366717448 13.392048270766185 3 3.480489430408394 5.950232410596316 4 1.374930195523622 3.1341010607052175 5 0.6913470337166809 1.9698740695538368 6 0.38872786274431675 1.3291355563930927 7 0.25422148408075784 1.0141043484496455 8 0.18440317336805756 0.8406800332581803 9 0.1336447699603108 0.6854358770150504 >10 0.8517147319314393 9.289534486197116 >50 0.07586940063577614 2.9791254612027087 >100 0.04086767720743389 4.3534997530901265 >500 0.004993509362014158 1.947281102882322 >1k 0.0030572506298045866 3.759772326554664 >5k 2.0381670865363914E-4 0.915305164251835 >10k+ 3.0572506298045865E-4 2.4146610890442894 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14965 0.867879861997533 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14439 0.8373750302293604 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12175 0.7060766668773781 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9514 0.5517546947574026 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6247 0.3622883727296083 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4739 0.2748334557972809 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4596 0.26654031712266363 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4121 0.23899317816851542 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3899 0.22611851533099772 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3825 0.22182696105182514 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3475 0.20152906919087385 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3132 0.18163713516714156 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2972 0.1723580988878495 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2655 0.15397400825950217 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2632 0.15264014679435392 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2111 0.12242528490990925 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1876 0.10879670037469907 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1784 0.10346125451410618 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.1598795349115041E-4 0.0 2 0.0 0.0 0.0 2.3197590698230083E-4 0.0 3 0.0 0.0 0.0 2.3197590698230083E-4 0.0 4 0.0 0.0 0.0 2.8996988372787604E-4 0.0 5 0.0 0.0 0.0 2.8996988372787604E-4 0.0 6 0.0 0.0 0.0 2.8996988372787604E-4 0.0 7 0.0 0.0 0.0 2.8996988372787604E-4 0.0 8 0.0 0.0 0.0 2.8996988372787604E-4 0.0 9 0.0 0.0 0.0 3.4796386047345124E-4 0.0 10 0.0 0.0 0.0 4.6395181396460166E-4 0.0 11 0.0 0.0 0.0 7.539216976924776E-4 0.0 12 0.0 0.0 0.0 0.001101885558165929 0.0 13 0.0 0.0 0.0 0.0013338614651482296 0.0 14 0.0 0.0 0.0 0.0016238313488761058 0.0 15 0.0 0.0 0.0 0.001971795209349557 0.0 16 5.799397674557521E-5 0.0 0.0 0.0031896687210066364 0.0 17 5.799397674557521E-5 0.0 0.0 0.004581524162900441 0.0 18 5.799397674557521E-5 0.0 0.0 0.005393439837338494 0.0 19 5.799397674557521E-5 0.0 0.0 0.005915385628048671 0.0 20 5.799397674557521E-5 0.0 0.0 0.007307241069942476 0.0 21 5.799397674557521E-5 0.0 0.0 0.010438915814203536 0.0 22 5.799397674557521E-5 0.0 0.0 0.016876247232962386 0.0 23 5.799397674557521E-5 0.0 0.0 0.026561241349473443 0.0 24 5.799397674557521E-5 0.0 0.0 0.03908794032651769 0.0 25 5.799397674557521E-5 0.0 0.0 0.044655362094092904 0.0 26 5.799397674557521E-5 0.0 0.0 0.04964284409421237 0.0 27 5.799397674557521E-5 0.0 0.0 0.07892980235072786 0.0 28 5.799397674557521E-5 0.0 0.0 0.1349519838869535 0.0 29 5.799397674557521E-5 0.0 0.0 0.20216700293507517 0.0 30 5.799397674557521E-5 0.0 0.0 0.3199527697053384 0.0 31 5.799397674557521E-5 0.0 0.0 0.4832058142441326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4320 0.0 24.623842 1 CGCGCTT 45 0.0038265728 20.555555 17 GCGCTTA 55 5.1445275E-4 20.181818 18 GCGTAAG 55 5.1445275E-4 20.181818 9 GCCGTCA 70 1.2196459E-4 18.5 13 ATTGGAC 530 0.0 17.801886 3 ATAACGC 105 4.800695E-7 17.619047 3 GTATCAA 6535 0.0 16.221119 2 TTGGACC 765 0.0 16.202614 4 TATACTG 330 0.0 15.69697 5 GGACCCT 795 0.0 15.591194 6 TATACCG 95 7.062949E-5 15.578948 5 TGGACCC 795 0.0 15.35849 5 TATTGGA 635 0.0 15.149607 2 ACCGACC 160 1.0973963E-8 15.031251 8 GTAATAC 235 0.0 14.957447 3 CACGGGT 75 0.004105514 14.8 18 GACCGTG 100 1.0938678E-4 14.799999 7 AAGACCG 115 2.2110004E-5 14.478261 5 CCCGTAT 90 8.2769745E-4 14.388888 1 >>END_MODULE