##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088133_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1260668 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.55549835484045 31.0 31.0 34.0 30.0 34.0 2 31.7204712105011 31.0 31.0 34.0 30.0 34.0 3 31.811738697262086 31.0 31.0 34.0 30.0 34.0 4 35.5285761199618 37.0 35.0 37.0 33.0 37.0 5 35.430456710252024 37.0 35.0 37.0 33.0 37.0 6 35.45796990167118 37.0 35.0 37.0 33.0 37.0 7 35.31216228221864 37.0 35.0 37.0 32.0 37.0 8 35.37802498358013 37.0 35.0 37.0 33.0 37.0 9 36.85909930290925 39.0 37.0 39.0 33.0 39.0 10 36.72890404134951 39.0 35.0 39.0 32.0 39.0 11 36.805393648446696 39.0 37.0 39.0 32.0 39.0 12 36.673210551866156 39.0 35.0 39.0 32.0 39.0 13 36.693069071317744 39.0 35.0 39.0 32.0 39.0 14 37.66685122490616 39.0 36.0 41.0 32.0 41.0 15 37.67124810021354 39.0 36.0 41.0 32.0 41.0 16 37.54430984208372 39.0 36.0 41.0 32.0 41.0 17 37.59523760419079 39.0 36.0 41.0 32.0 41.0 18 37.576833869028164 39.0 36.0 41.0 32.0 41.0 19 37.623325887545334 39.0 37.0 41.0 32.0 41.0 20 37.53744998683238 39.0 36.0 41.0 32.0 41.0 21 37.454260756995495 39.0 36.0 41.0 32.0 41.0 22 37.36293377796533 39.0 36.0 41.0 31.0 41.0 23 37.129850206398515 39.0 36.0 41.0 31.0 41.0 24 36.98156453562714 39.0 36.0 40.0 31.0 41.0 25 36.866160638645546 39.0 36.0 40.0 30.0 41.0 26 36.99607113054349 39.0 36.0 40.0 31.0 41.0 27 36.90249930988968 39.0 35.0 40.0 31.0 41.0 28 36.81497904285664 39.0 35.0 40.0 30.0 41.0 29 36.74144025231068 39.0 35.0 40.0 30.0 41.0 30 36.531930690713175 39.0 35.0 40.0 30.0 41.0 31 36.340835176271625 38.0 35.0 40.0 30.0 41.0 32 36.180370248154155 38.0 35.0 40.0 30.0 41.0 33 35.97216237740626 38.0 35.0 40.0 29.0 41.0 34 35.82740340835176 38.0 35.0 40.0 29.0 41.0 35 35.60622146354155 38.0 34.0 40.0 27.0 41.0 36 35.51381410490311 38.0 34.0 40.0 27.0 41.0 37 35.34132777226042 38.0 34.0 40.0 26.0 41.0 38 35.21341860029762 38.0 34.0 40.0 25.0 41.0 39 35.08952000050767 38.0 34.0 40.0 25.0 41.0 40 34.87016803789737 38.0 33.0 40.0 24.0 41.0 41 34.69468488134862 38.0 33.0 40.0 23.0 41.0 42 34.4599053834951 38.0 33.0 40.0 22.0 41.0 43 34.1281169982898 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 4.0 15 4.0 16 19.0 17 43.0 18 85.0 19 215.0 20 488.0 21 984.0 22 1706.0 23 3024.0 24 4817.0 25 7519.0 26 11201.0 27 15655.0 28 21360.0 29 27864.0 30 35565.0 31 44064.0 32 54412.0 33 66785.0 34 82384.0 35 100688.0 36 130281.0 37 177574.0 38 231111.0 39 242810.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.59387562784175 22.922291991230047 13.927378183629632 22.556454197298574 2 18.016876766920394 22.806718342973724 35.973626680458295 23.202778209647583 3 19.796250876519434 25.99447277157824 32.097110420824514 22.11216593107781 4 13.161276402669062 15.686762890784886 35.045229989180335 36.106730717365714 5 11.017968251752245 41.2891419469678 34.17910187297528 13.513787928304676 6 31.754196981282938 36.46035276535932 15.217170579407108 16.568279673950638 7 25.37456332674423 35.20427265544933 20.63588510218392 18.78527891562251 8 28.59484019583269 34.01593440937661 19.440169814733142 17.949055580057557 9 25.72985115827482 13.7032113133672 22.75047831784419 37.81645921051379 10 16.505217868622033 28.19933559033782 32.75263590413971 22.542810636900438 11 32.05126171204473 21.682314455510888 24.540719681946396 21.72570415049799 12 20.187630684684628 27.591086630262684 31.493779488334756 20.72750319671793 13 31.65163230922019 20.71163859160382 28.28230747508464 19.354421624091355 14 20.8941608734417 22.211637005143306 27.99261978570091 28.90158233571408 15 23.543549927498756 28.61601944366003 26.509993114761382 21.330437514079836 16 22.03569853442778 28.497352197406457 26.424165601094025 23.042783667071742 17 19.758572439373413 27.101425593415556 27.43323380937725 25.706768157833782 18 20.827767501039133 26.483102609092956 31.621965497656795 21.06716439221111 19 20.277265703579374 24.65764182163742 32.783730530163375 22.28136194461984 20 24.994764680312343 23.581387010695916 31.528840265636948 19.895008043354792 21 23.92215872854709 24.79534659402793 30.2944946647333 20.988000012691685 22 22.423032868288875 23.967690145224594 31.60253135639201 22.00674563009452 23 21.303784977488124 26.06094546700638 32.604857107501736 20.030412448003755 24 20.095219359894916 25.109148483185106 30.867603524480675 23.92802863243931 25 21.263964818651697 26.316603578420327 31.870405213743823 20.549026389184146 26 22.85867492472245 25.035536715455613 30.553880958349065 21.55190740147287 27 21.44910476033341 26.739395304711472 29.934606097719623 21.876893837235496 28 21.089216193319732 25.778000234796156 30.47931731431273 22.653466257571385 29 20.120920020179778 25.710972278189026 31.73460419396701 22.43350350766419 30 19.516795857434314 26.051268057886773 33.493988901122265 20.937947183556656 31 20.90399692861245 25.552484873099026 32.17167406486085 21.371844133427675 32 22.251695133056444 25.714700460390837 30.145526022711767 21.88807838384095 33 23.252672392731473 25.55621305530084 29.695605821675493 21.495508730292194 34 21.202965411987932 28.350207984973046 29.89970396646857 20.547122636570453 35 19.900402009093593 29.139075474272367 30.243648605342564 20.716873911291476 36 20.874488763100196 25.336329628419218 32.48381017048105 21.305371437999536 37 20.9787985417255 25.80742907728284 31.496159179101873 21.71761320188979 38 21.148153201318664 25.240904028657823 32.38965373912878 21.221289030894734 39 22.310394171978665 24.645029460571696 32.22942122747623 20.81515513997341 40 20.54974029641428 25.494420418381363 31.10517598606453 22.85066329913982 41 21.581653536061836 25.155076514990466 31.00491168174333 22.258358267204372 42 19.154924214781367 26.897803386775898 31.40826926676968 22.53900313167305 43 20.085779919852015 26.463113206649176 30.977307268844772 22.47379960465404 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 68.0 1 125.5 2 183.0 3 345.0 4 507.0 5 507.0 6 1051.0 7 1595.0 8 1784.5 9 1974.0 10 3368.0 11 4762.0 12 4762.0 13 9548.5 14 14335.0 15 22768.5 16 31202.0 17 29227.0 18 27252.0 19 27252.0 20 29692.5 21 32133.0 22 25329.5 23 18526.0 24 20659.5 25 22793.0 26 22793.0 27 24951.0 28 27109.0 29 29261.0 30 31413.0 31 34300.5 32 37188.0 33 37188.0 34 40909.0 35 44630.0 36 48484.0 37 52338.0 38 55554.5 39 58771.0 40 58771.0 41 61820.0 42 64869.0 43 74334.5 44 83800.0 45 107185.0 46 130570.0 47 130570.0 48 131172.5 49 131775.0 50 119727.0 51 107679.0 52 100622.0 53 93565.0 54 93565.0 55 81491.5 56 69418.0 57 58155.5 58 46893.0 59 41442.5 60 35992.0 61 35992.0 62 31830.5 63 27669.0 64 24178.5 65 20688.0 66 17766.0 67 14844.0 68 14844.0 69 12389.5 70 9935.0 71 8338.5 72 6742.0 73 5414.5 74 4087.0 75 4087.0 76 3168.0 77 2249.0 78 1789.5 79 1330.0 80 1045.5 81 761.0 82 761.0 83 604.5 84 448.0 85 341.0 86 234.0 87 192.5 88 151.0 89 151.0 90 136.0 91 121.0 92 79.5 93 38.0 94 28.0 95 18.0 96 18.0 97 13.0 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1260668.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.472210677242316 #Duplication Level Percentage of deduplicated Percentage of total 1 79.58402947463999 40.16781902187892 2 11.820940950668675 11.93258044130781 3 3.6441555727448947 5.517857634246809 4 1.5326726891538383 3.094295154649122 5 0.819843848856998 2.0689665730975806 6 0.4915396599918162 1.4885455965196204 7 0.33975856492634454 1.200385610785198 8 0.2446952777051976 0.9880249286450439 9 0.19235844396598906 0.8737880318458119 >10 1.1697715521086263 11.229775840590012 >50 0.0958781894197013 3.359194134730047 >100 0.05145315575376217 4.89537738781427 >500 0.007238055157974628 2.681374115497198 >1k 0.004720470755200845 5.158089252359906 >5k 3.1469805034672297E-4 0.9260878346359275 >10k+ 6.293961006934459E-4 4.417838441396739 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16337 1.2959002687464107 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16050 1.2731345604076567 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13053 1.035403452772657 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10188 0.8081429845129724 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6505 0.5159962813365613 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5156 0.4089895198418616 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4706 0.3732941583351049 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4580 0.363299457113213 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4099 0.32514508181376856 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4083 0.32387591340463945 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3780 0.2998410366567566 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3518 0.2790584039572671 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3428 0.27191933165591575 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2709 0.21488607627067557 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2611 0.20711241976475964 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2182 0.17308284179498487 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2049 0.16253287939409902 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1894 0.15023781043066056 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1799 0.14270212300145638 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1738 0.13786341844165156 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1683 0.13350065203527017 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1656 0.1313589303448648 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1620 0.12850330142432426 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1603 0.12715480998962456 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1589 0.12604428763163658 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1564 0.1240612119923723 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1462 0.11597026338417411 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1403 0.11129020487551043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.932302557057052E-5 0.0 5 0.0 0.0 0.0 7.932302557057052E-5 0.0 6 7.932302557057052E-5 0.0 0.0 7.932302557057052E-5 0.0 7 7.932302557057052E-5 0.0 0.0 7.932302557057052E-5 0.0 8 7.932302557057052E-5 0.0 0.0 7.932302557057052E-5 0.0 9 7.932302557057052E-5 0.0 0.0 7.932302557057052E-5 0.0 10 2.3796907671171157E-4 0.0 0.0 3.966151278528526E-4 0.0 11 2.3796907671171157E-4 0.0 0.0 4.7593815342342313E-4 0.0 12 2.3796907671171157E-4 0.0 0.0 9.518763068468463E-4 0.0 13 2.3796907671171157E-4 0.0 0.0 0.0010311993324174167 0.0 14 2.3796907671171157E-4 0.0 0.0 0.00150713748584084 0.0 15 2.3796907671171157E-4 0.0 0.0 0.0023796907671171158 0.0 16 2.3796907671171157E-4 0.0 0.0 0.0037281822018168146 0.0 17 2.3796907671171157E-4 0.0 0.0 0.00610787296893393 0.0 18 3.172921022822821E-4 0.0 0.0 0.0068217801990690646 0.0 19 3.172921022822821E-4 0.0 0.0 0.007456364403633629 0.0 20 3.172921022822821E-4 0.0 0.0 0.010074024247462456 0.0 21 3.172921022822821E-4 0.0 0.0 0.014436790653843835 0.0 22 3.172921022822821E-4 0.0 0.0 0.026335244489429414 0.0 23 3.172921022822821E-4 0.0 0.0 0.042993079859249224 0.0 24 3.172921022822821E-4 0.0 0.0 0.06425165071216213 0.0 25 4.7593815342342313E-4 0.0 0.0 0.07258056839707203 0.0 26 4.7593815342342313E-4 0.0 0.0 0.08114745515869365 0.0 27 4.7593815342342313E-4 0.0 0.0 0.12041235281612606 7.932302557057052E-5 28 4.7593815342342313E-4 0.0 0.0 0.19370682844333323 7.932302557057052E-5 29 4.7593815342342313E-4 0.0 0.0 0.2831038782613662 7.932302557057052E-5 30 4.7593815342342313E-4 0.0 0.0 0.4540449983659457 7.932302557057052E-5 31 4.7593815342342313E-4 0.0 0.0 0.6491003182439786 7.932302557057052E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3910 0.0 27.82097 1 CGTTTAG 35 8.869873E-4 26.428572 26 TACCGTC 110 7.4578566E-11 21.863636 7 GACGTTA 60 3.7266556E-5 21.583332 7 GTATTGG 515 0.0 21.553396 1 TACCCCG 70 5.102569E-6 21.142859 5 TTGGACC 750 0.0 19.486666 4 ATTGGAC 515 0.0 19.398058 3 CGTCTGT 355 0.0 18.760563 34 CGTATAC 80 1.6168728E-5 18.5 3 GGTCTAG 90 2.152552E-6 18.5 1 TGGACCC 815 0.0 18.386503 5 TCTCGAC 145 1.546141E-10 17.862068 11 GGACCCT 810 0.0 17.58642 6 ACGGACC 95 3.6069468E-6 17.526316 8 TGCGACG 65 0.0015800487 17.076923 22 GTATCAA 6375 0.0 17.03451 2 TAGTACT 230 0.0 16.891304 4 TATTGGA 665 0.0 16.691729 2 GTCTAAC 90 4.4465043E-5 16.444445 1 >>END_MODULE