##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088132_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2563704 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.471397634048238 31.0 31.0 34.0 30.0 34.0 2 31.64881905243351 31.0 31.0 34.0 30.0 34.0 3 31.734793096238878 31.0 31.0 34.0 30.0 34.0 4 35.46229166861697 37.0 35.0 37.0 33.0 37.0 5 35.356453787176676 37.0 35.0 37.0 33.0 37.0 6 35.39007779369225 37.0 35.0 37.0 33.0 37.0 7 35.24749230020314 37.0 35.0 37.0 32.0 37.0 8 35.31023784337037 37.0 35.0 37.0 32.0 37.0 9 36.77546978902401 39.0 37.0 39.0 32.0 39.0 10 36.629076913715465 38.0 35.0 39.0 32.0 39.0 11 36.709187566115276 39.0 35.0 39.0 32.0 39.0 12 36.58428703157619 38.0 35.0 39.0 32.0 39.0 13 36.597046694938264 38.0 35.0 39.0 32.0 39.0 14 37.55271942470738 39.0 36.0 41.0 32.0 41.0 15 37.56764548481416 39.0 36.0 41.0 32.0 41.0 16 37.439796091904526 39.0 36.0 41.0 32.0 41.0 17 37.48181420319975 39.0 36.0 41.0 32.0 41.0 18 37.46420296570899 39.0 36.0 41.0 32.0 41.0 19 37.50948510436462 39.0 36.0 41.0 32.0 41.0 20 37.430245847414525 39.0 36.0 41.0 32.0 41.0 21 37.35198330228451 39.0 36.0 41.0 31.0 41.0 22 37.23893202959468 39.0 36.0 41.0 31.0 41.0 23 37.018513447730314 39.0 36.0 40.0 31.0 41.0 24 36.85615266036953 39.0 36.0 40.0 30.0 41.0 25 36.75396262595058 39.0 35.0 40.0 30.0 41.0 26 36.877009202310404 39.0 36.0 40.0 31.0 41.0 27 36.7639431073166 39.0 35.0 40.0 30.0 41.0 28 36.66916071434144 39.0 35.0 40.0 30.0 41.0 29 36.579906650689786 39.0 35.0 40.0 30.0 41.0 30 36.37221457703385 38.0 35.0 40.0 30.0 41.0 31 36.1859321512936 38.0 35.0 40.0 30.0 41.0 32 36.024687717458804 38.0 35.0 40.0 29.0 41.0 33 35.80175324452433 38.0 35.0 40.0 29.0 41.0 34 35.65961866112468 38.0 34.0 40.0 27.0 41.0 35 35.439973959552276 38.0 34.0 40.0 27.0 41.0 36 35.34054672458287 38.0 34.0 40.0 26.0 41.0 37 35.17379346445612 38.0 34.0 40.0 25.0 41.0 38 35.03835232148485 38.0 34.0 40.0 25.0 41.0 39 34.91688159007436 38.0 33.0 40.0 24.0 41.0 40 34.69261935075188 38.0 33.0 40.0 24.0 41.0 41 34.51419664672677 38.0 33.0 40.0 23.0 41.0 42 34.29605796925074 38.0 33.0 40.0 22.0 41.0 43 33.96156849620705 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 10.0 13 13.0 14 8.0 15 16.0 16 53.0 17 129.0 18 252.0 19 576.0 20 1165.0 21 2224.0 22 4063.0 23 6629.0 24 11042.0 25 16895.0 26 24182.0 27 34203.0 28 45913.0 29 59789.0 30 75076.0 31 93302.0 32 113708.0 33 139440.0 34 170685.0 35 207683.0 36 267550.0 37 360938.0 38 475442.0 39 452714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.078924868081494 23.393613303251858 14.27075824666186 22.256703582004786 2 18.174172993450103 23.318682656032053 35.70065030908404 22.8064940414338 3 19.953278537615887 26.028355847632955 32.29389976377928 21.724465850971875 4 13.538341399787182 16.08610042344982 35.1377148063895 35.23784337037349 5 11.116962020576478 41.20916455253805 34.26655339305942 13.407320033826059 6 31.627247139295335 36.8102167800963 15.193095614782361 16.369440465826006 7 24.874088428305296 35.29639147109027 21.011122968954293 18.818397131650144 8 28.18004730655333 34.296080982827974 19.729071686903012 17.794800023715688 9 25.47450875764129 13.90913303563906 23.016853739745304 37.599504466974345 10 16.6129943238377 28.379368289006845 32.83464081656853 22.172996570586932 11 32.106631654824426 21.97738116412815 24.305224004019184 21.610763177028236 12 19.926949445021734 27.816939865132635 31.38895909980247 20.867151590043157 13 31.13514664719484 21.000669344042837 28.335642492269 19.528541516493323 14 20.716900234972524 22.579361735988243 28.075160002870845 28.628578026168388 15 23.35413916739218 29.230324561649862 26.114091174332138 21.30144509662582 16 21.98065767342876 28.600025587977395 26.458709741842274 22.960606996751576 17 19.716706764899534 27.286457406939334 27.70690376112063 25.2899320670405 18 20.783795633193222 26.601588950986542 31.64702321328827 20.96759220253196 19 20.17584713367846 25.009517479396997 32.71668648174672 22.097948905177823 20 24.604010447383942 24.07879380770947 31.453514134237025 19.863681610669563 21 23.891720729070126 24.912314370145697 30.27408780420829 20.92187709657589 22 22.287401353666414 24.397941416013705 31.295773615050727 22.018883615269157 23 21.153651123530643 26.407572793114966 32.31262267406846 20.12615340928594 24 20.098303080230792 25.590941856002097 30.808821923279755 23.501933140487356 25 21.2008094538215 26.550998087142663 31.540146600387565 20.70804585864827 26 22.55252556457376 25.50212505031782 30.415718819333275 21.529630565775143 27 21.37235811934607 26.913910498247844 29.98665212520634 21.727079257199737 28 21.01853412094376 26.340716400957366 30.275023949722744 22.36572552837613 29 20.033396991228315 26.190777094391553 31.47106686263313 22.304759051747002 30 19.502953539098115 26.403048089795078 33.07152463778969 21.022473733317106 31 20.816989792893406 25.805904269759694 32.09719218755364 21.279913749793266 32 21.93736094338504 26.03955058774336 30.0831921313849 21.9398963374867 33 22.805011811035907 25.92733014419761 29.765799795920277 21.5018582488462 34 21.137931680100355 28.44848703282438 29.953301941253745 20.460279345821515 35 20.009135219978592 29.06926852709985 30.209220721268913 20.71237553165264 36 20.587556129724803 25.6436000411904 32.36754321091671 21.401300618168086 37 20.768115195826038 26.032022417564587 31.526260441923093 21.673601944686283 38 21.019782314963038 25.332253645506658 32.38064924811913 21.267314791411177 39 22.051804732527625 24.936459123206113 32.27876541129553 20.73297073297073 40 20.41257493064722 25.541521174051297 31.45402121305736 22.591882682244126 41 21.145225813900513 25.325700626905444 31.26020008550129 22.26887347369275 42 19.071429462995727 26.8239235106705 31.660909371752744 22.443737654581028 43 19.654453088188028 26.54561525043453 31.135068635068635 22.664863026308808 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 149.0 1 259.0 2 369.0 3 747.0 4 1125.0 5 1125.0 6 2131.0 7 3137.0 8 3832.0 9 4527.0 10 7238.5 11 9950.0 12 9950.0 13 19636.0 14 29322.0 15 47016.5 16 64711.0 17 59917.0 18 55123.0 19 55123.0 20 60689.0 21 66255.0 22 53719.5 23 41184.0 24 45817.0 25 50450.0 26 50450.0 27 55644.0 28 60838.0 29 64524.0 30 68210.0 31 73518.0 32 78826.0 33 78826.0 34 84737.5 35 90649.0 36 99284.0 37 107919.0 38 114426.5 39 120934.0 40 120934.0 41 127437.0 42 133940.0 43 151260.0 44 168580.0 45 211651.5 46 254723.0 47 254723.0 48 258819.0 49 262915.0 50 239284.5 51 215654.0 52 202907.5 53 190161.0 54 190161.0 55 165203.5 56 140246.0 57 117985.5 58 95725.0 59 84417.5 60 73110.0 61 73110.0 62 64129.0 63 55148.0 64 47664.5 65 40181.0 66 34225.5 67 28270.0 68 28270.0 69 23775.5 70 19281.0 71 16164.0 72 13047.0 73 10530.5 74 8014.0 75 8014.0 76 6236.0 77 4458.0 78 3538.5 79 2619.0 80 2089.5 81 1560.0 82 1560.0 83 1240.5 84 921.0 85 700.5 86 480.0 87 435.5 88 391.0 89 391.0 90 376.5 91 362.0 92 241.5 93 121.0 94 97.5 95 74.0 96 74.0 97 47.0 98 20.0 99 22.5 100 25.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2563704.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.98520440003989 #Duplication Level Percentage of deduplicated Percentage of total 1 75.88346511300857 33.37749723578978 2 12.883439621549744 11.33361450258876 3 4.689826913404343 6.188489861606948 4 2.1800386171073183 3.835577766937828 5 1.1314069137763807 2.4882582181036206 6 0.6759395629094198 1.7838803901986673 7 0.4405045131184612 1.3562976734058902 8 0.3153381656391145 1.109617093661607 9 0.2144445182494373 0.8489147370902626 >10 1.3323187576637283 11.17280070961642 >50 0.14367085823742076 4.449541378049413 >100 0.0964348676207285 7.996415635821838 >500 0.006229800270784798 1.9333608973863419 >1k 0.005784814537157265 5.121024369719568 >5k 7.11977173803971E-4 2.401267978041108 >10k+ 4.4498573362748185E-4 4.603441551981973 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32841 1.280998118347516 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31287 1.2203826962863107 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24452 0.9537762549810742 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16420 0.6404795561422068 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12598 0.491398382964648 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9753 0.3804261334381816 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9234 0.36018198668801077 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8569 0.33424295472488247 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7541 0.2941447218555652 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7357 0.2869676062447147 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6765 0.26387601688806506 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6107 0.2382100273666539 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6016 0.23466047562433107 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4897 0.191012691012691 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4789 0.18680003619762656 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4052 0.15805256769112191 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4038 0.15750648280768764 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3932 0.15337184011882807 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3572 0.13932965740194656 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3287 0.1282129294177487 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3274 0.12770585059741685 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3206 0.12505343830645035 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3041 0.11861743789454632 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2981 0.11627707410839941 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2965 0.11565297709876023 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2858 0.11147932834679823 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2849 0.11112827377887619 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2695 0.1051213400610991 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2575 0.10044061248880526 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 3.9006063102448646E-5 0.0 11 0.0 0.0 0.0 1.5602425240979459E-4 0.0 12 0.0 0.0 0.0 4.6807275722938373E-4 0.0 13 0.0 0.0 0.0 7.021091358440756E-4 0.0 14 0.0 0.0 0.0 8.971394513563188E-4 0.0 15 0.0 0.0 0.0 0.001755272839610189 0.0 16 0.0 0.0 0.0 0.0025744001647616107 0.0 17 0.0 0.0 0.0 0.004524703319884043 0.0 18 0.0 0.0 0.0 0.005226812455728118 0.0 19 0.0 0.0 0.0 0.006436000411904026 0.0 20 0.0 0.0 0.0 0.008269285377719112 0.0 21 0.0 0.0 0.0 0.011896849246246836 0.0 22 0.0 0.0 0.0 0.02106327407532227 0.0 23 0.0 0.0 0.0 0.033857262772925424 0.0 24 0.0 0.0 0.0 0.05070788203318324 0.0 25 0.0 0.0 0.0 0.05729990669749706 0.0 26 0.0 0.0 0.0 0.06572521632762597 0.0 27 0.0 0.0 0.0 0.11144032228369578 0.0 28 0.0 0.0 0.0 0.1913247395175106 0.0 29 0.0 0.0 0.0 0.292038394448033 0.0 30 0.0 0.0 0.0 0.4684628178604082 0.0 31 0.0 0.0 0.0 0.6980134992183185 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8075 0.0 27.56099 1 ATTGGAC 1035 0.0 21.270533 3 GTATTGG 1050 0.0 21.142857 1 CGCGATA 90 2.1543183E-6 18.5 14 GTATCAA 13025 0.0 17.029943 2 TATTGGA 1360 0.0 16.867645 2 TTGGACC 1715 0.0 16.720116 4 TGGACCC 1775 0.0 15.946478 5 GGACCCT 1770 0.0 15.677966 6 TGCGACG 190 2.7284841E-11 15.578948 22 TGCGTTA 95 7.0650916E-5 15.578948 37 ACGTGCG 120 1.937664E-6 15.416667 9 CAATGCG 195 4.1836756E-11 15.179487 19 CGTCTGT 710 0.0 14.852113 34 ATTCGTC 125 2.9620005E-6 14.800001 17 TACTAGG 330 0.0 14.575757 2 ACGTTTA 180 3.3360266E-9 14.388888 26 CGCGAAT 90 8.2789117E-4 14.388888 35 TTTTTAC 1460 0.0 14.065068 1 ATACACT 425 0.0 13.929412 4 >>END_MODULE