##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088130_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 716611 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.570546642460137 31.0 31.0 34.0 30.0 34.0 2 31.763771418524136 31.0 31.0 34.0 30.0 34.0 3 31.85606137779074 31.0 31.0 34.0 30.0 34.0 4 35.569956364052466 37.0 35.0 37.0 33.0 37.0 5 35.45362965402429 37.0 35.0 37.0 33.0 37.0 6 35.47121520601833 37.0 35.0 37.0 33.0 37.0 7 35.33198764741261 37.0 35.0 37.0 32.0 37.0 8 35.37839776391934 37.0 35.0 37.0 33.0 37.0 9 36.89979779824758 39.0 37.0 39.0 33.0 39.0 10 36.75178723184545 39.0 35.0 39.0 32.0 39.0 11 36.81272824447294 39.0 37.0 39.0 32.0 39.0 12 36.68983172181281 39.0 35.0 39.0 32.0 39.0 13 36.70477148690154 39.0 35.0 39.0 32.0 39.0 14 37.70795731575429 39.0 37.0 41.0 32.0 41.0 15 37.713396808031135 39.0 37.0 41.0 32.0 41.0 16 37.5978543449654 39.0 36.0 41.0 32.0 41.0 17 37.60884077972568 39.0 36.0 41.0 32.0 41.0 18 37.58833593120954 39.0 36.0 41.0 32.0 41.0 19 37.62376798569935 39.0 37.0 41.0 32.0 41.0 20 37.52831592035288 39.0 36.0 41.0 32.0 41.0 21 37.45690897851136 39.0 36.0 41.0 32.0 41.0 22 37.34301455043252 39.0 36.0 41.0 31.0 41.0 23 37.125346945553446 39.0 36.0 41.0 31.0 41.0 24 36.9724606515948 39.0 36.0 40.0 31.0 41.0 25 36.865934237682644 39.0 36.0 40.0 30.0 41.0 26 37.004659431686086 39.0 36.0 40.0 31.0 41.0 27 36.90283710409134 39.0 36.0 41.0 31.0 41.0 28 36.83493415535067 39.0 35.0 41.0 30.0 41.0 29 36.73607019708042 39.0 35.0 40.0 30.0 41.0 30 36.55186147017001 39.0 35.0 40.0 30.0 41.0 31 36.376050604860936 38.0 35.0 40.0 30.0 41.0 32 36.220458519336155 38.0 35.0 40.0 30.0 41.0 33 36.014483450575 38.0 35.0 40.0 29.0 41.0 34 35.89075663086388 38.0 35.0 40.0 29.0 41.0 35 35.68556022723625 38.0 35.0 40.0 27.0 41.0 36 35.60078061877365 38.0 34.0 40.0 27.0 41.0 37 35.440223496429724 38.0 34.0 40.0 26.0 41.0 38 35.33299377207439 38.0 34.0 40.0 25.0 41.0 39 35.23421493669508 38.0 34.0 40.0 25.0 41.0 40 35.05660672247565 38.0 34.0 40.0 24.0 41.0 41 34.908079836898956 38.0 34.0 40.0 24.0 41.0 42 34.7095760461394 38.0 33.0 40.0 23.0 41.0 43 34.391841598859074 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 0.0 14 1.0 15 0.0 16 18.0 17 24.0 18 63.0 19 116.0 20 274.0 21 566.0 22 1023.0 23 1779.0 24 2825.0 25 4363.0 26 6238.0 27 8848.0 28 11838.0 29 15559.0 30 19819.0 31 24999.0 32 29874.0 33 37511.0 34 45743.0 35 56240.0 36 72506.0 37 99110.0 38 132451.0 39 144819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.72517865341169 22.91717542711457 14.366790350692357 22.99085556878139 2 18.05316971132176 22.66376039441203 36.32626348186115 22.956806412405058 3 19.535145288029348 25.4086247629467 32.13570542456088 22.92052452446306 4 13.641989866189608 16.12757828166188 35.402889433737414 34.827542418411106 5 11.677744271299211 40.21386777484577 34.6118047308791 13.496583222975925 6 31.93210821491716 37.04352849732979 15.159410056502063 15.864953231250986 7 25.350713287962368 34.51314590482145 21.44747987401812 18.68866093319807 8 27.26597833413107 34.896896642669454 19.780327123083513 18.05679790011596 9 25.24005352973929 14.488195129575182 22.745255096558665 37.52649624412687 10 16.753301302938414 27.913749579618507 33.27216579148241 22.060783325960667 11 32.35590857522421 22.372109833647542 23.873342720108955 21.398638871019283 12 19.973877040681764 27.666195467275827 31.174374939820908 21.1855525522215 13 30.78964738191292 21.194483478484145 27.638286322705063 20.37758281689787 14 20.868086032729057 22.605430282259135 27.717548293286036 28.808935391725775 15 23.28808795846003 29.302229522014034 25.52779681026387 21.881885709262068 16 22.300243786377827 28.36420317299065 26.18938308231383 23.146169958317692 17 20.229524804949968 27.412640888850436 27.535580670684652 24.822253635514947 18 21.162527507950617 26.652395790742816 30.83011564154053 21.354961059766037 19 20.91469430416223 25.29922091622931 31.671436804626218 22.114647974982244 20 24.252767540548497 24.568280419920992 30.653590302130446 20.52536173740007 21 23.875435905951765 25.273823594669913 29.395306519157533 21.45543398022079 22 22.468675473862387 24.932215665123756 30.387197517202498 22.211911343811355 23 21.63475023408795 26.550527413059527 31.185259506203504 20.62946284664902 24 20.818407755393093 25.68352983696873 29.824409616933035 23.673652790705138 25 21.718617213523096 26.322230610470676 30.838069747743198 21.121082428263033 26 22.717345951987898 25.6476665861953 29.862505599272133 21.77248186254467 27 21.63544796270222 26.903717637602547 29.360140996998375 22.100693402696862 28 21.62233066475396 26.271017330183323 29.58327460784163 22.523377397221086 29 20.651929708028486 26.104260191373 30.588980632449125 22.654829468149387 30 20.332788639861793 26.481452280246888 31.72809236810487 21.457666711786448 31 21.446642599681 25.65785342396363 31.1813522259636 21.714151750391775 32 22.16893126117238 25.89494160709227 29.497872625455095 22.438254506280256 33 22.804143391602977 25.74297631490446 29.53694542785416 21.915934865638402 34 21.64451843468772 27.6267040277082 29.562203203690707 21.16657433391338 35 20.63825422718881 28.20847014628578 29.7154244073842 21.43785121914121 36 21.067078233518604 25.48663082202199 31.343783447365446 22.10250749709396 37 21.237603106845974 25.607756509459108 30.874212089962338 22.280428293732584 38 21.26160497117683 25.182560691923513 31.743302851895937 21.81253148500372 39 21.974544069237005 24.986498951313894 31.638643559755568 21.40031341969353 40 20.64913879357141 25.41336931752373 31.102090255382624 22.83540163352223 41 21.172156162827534 25.27312586605564 31.01347872137045 22.541239249746376 42 19.441091470825874 26.670397188990957 31.137674414710354 22.750836925472818 43 19.88680050962098 26.483964103258252 30.73675955295132 22.892475834169446 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 59.0 1 90.0 2 121.0 3 189.5 4 258.0 5 258.0 6 525.0 7 792.0 8 958.0 9 1124.0 10 1785.0 11 2446.0 12 2446.0 13 4700.5 14 6955.0 15 11147.0 16 15339.0 17 14341.0 18 13343.0 19 13343.0 20 14810.5 21 16278.0 22 13493.0 23 10708.0 24 11954.0 25 13200.0 26 13200.0 27 14715.0 28 16230.0 29 17625.0 30 19020.0 31 20776.5 32 22533.0 33 22533.0 34 24995.0 35 27457.0 36 29867.0 37 32277.0 38 34155.5 39 36034.0 40 36034.0 41 37914.0 42 39794.0 43 44596.0 44 49398.0 45 58707.0 46 68016.0 47 68016.0 48 68795.5 49 69575.0 50 63774.0 51 57973.0 52 54421.0 53 50869.0 54 50869.0 55 45178.0 56 39487.0 57 34215.0 58 28943.0 59 26023.5 60 23104.0 61 23104.0 62 20479.0 63 17854.0 64 15483.5 65 13113.0 66 10906.5 67 8700.0 68 8700.0 69 7329.0 70 5958.0 71 4952.5 72 3947.0 73 3184.5 74 2422.0 75 2422.0 76 1873.5 77 1325.0 78 1085.0 79 845.0 80 644.0 81 443.0 82 443.0 83 353.5 84 264.0 85 211.5 86 159.0 87 130.0 88 101.0 89 101.0 90 97.5 91 94.0 92 59.0 93 24.0 94 21.5 95 19.0 96 19.0 97 12.0 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 716611.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.81137497448202 #Duplication Level Percentage of deduplicated Percentage of total 1 84.71549490394888 50.66950231848908 2 9.073173018968216 10.853579072917222 3 2.424416439019821 4.350230421855389 4 1.1208147284936552 2.681498800114251 5 0.5966995043718942 1.7844708901537474 6 0.3910233002963449 1.4032584742670502 7 0.27205514530349467 1.139039461663916 8 0.20654997431681674 0.9883230371866206 9 0.1515165893058702 0.8156173984045197 >10 0.937957004464493 10.433582553611174 >50 0.06846985007564431 2.8112019450676 >100 0.034351634586426844 4.318612403175557 >500 0.003972638013284998 1.7056128925889935 >1k 0.0028042150682011744 3.1199451764624695 >5k 7.010537670502936E-4 2.925525154042467 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7679 1.0715716057944966 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7405 1.0333360777325495 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5847 0.8159238415262954 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3382 0.47194363469162487 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2842 0.3965889443505612 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2158 0.3011396699185472 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2042 0.28495236606750385 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2026 0.28271963450184273 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1980 0.2763005312505669 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1692 0.23611136306866629 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1444 0.2015040238009185 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1440 0.2009458409095032 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1210 0.16885032465312422 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1100 0.15350029513920385 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1006 0.1403829971909446 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 973 0.1357779883367685 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 910 0.12698660779697774 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 875 0.12210250749709395 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 851 0.11875341014860223 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 833 0.11624158713723345 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 783 0.10926430099454237 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 772 0.10772929804315032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.7909144570764335E-4 0.0 11 0.0 0.0 0.0 8.3727433712293E-4 0.0 12 0.0 0.0 0.0 0.0022327315656611468 0.0 13 0.0 0.0 0.0 0.0027909144570764334 0.0 14 0.0 0.0 0.0 0.0032095516256378984 0.0 15 0.0 0.0 0.0 0.005163191745591402 0.0 16 0.0 0.0 0.0 0.0073959233112525485 0.0 17 0.0 0.0 0.0 0.01339638939396688 0.0 18 0.0 0.0 0.0 0.015210483791066562 0.0 19 0.0 0.0 0.0 0.01660594101960478 0.0 20 0.0 0.0 0.0 0.023164589993734396 0.0 21 0.0 0.0 0.0 0.02944414752215637 0.0 22 0.0 0.0 0.0 0.05302737468445223 0.0 23 0.0 0.0 0.0 0.07870378768955542 0.0 24 0.0 0.0 0.0 0.11442749274013377 0.0 25 0.0 0.0 0.0 0.12475387623131658 0.0 26 0.0 0.0 0.0 0.1384293570709911 0.0 27 0.0 0.0 0.0 0.18657263145555958 0.0 28 0.0 0.0 0.0 0.28885964630741084 0.0 29 0.0 0.0 0.0 0.4256144547041561 0.0 30 0.0 0.0 0.0 0.7023336231232845 0.0 31 0.0 0.0 0.0 1.0565006677262838 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1655 0.0 30.293053 1 TTCCGCC 35 8.8661216E-4 26.428572 31 ATTGGAC 195 0.0 21.820513 3 TATACTC 70 5.0974995E-6 21.142859 5 TGCGGCG 45 0.0038244224 20.555557 36 GTATTGG 215 0.0 19.790697 1 TTGGACC 375 0.0 19.733335 4 GTATTAG 110 3.8455255E-8 18.5 1 GGACCCT 390 0.0 18.5 6 GTATCAA 2785 0.0 18.001797 2 GACCCTC 395 0.0 17.797468 7 TGCGCAG 75 2.065898E-4 17.266666 10 GACGGAC 65 0.0015791494 17.076923 7 ACTGGTC 65 0.0015791494 17.076923 8 TATTGGA 265 0.0 16.754717 2 TGGACCC 410 0.0 16.695122 5 GCTTCGG 80 3.3803433E-4 16.1875 33 TTTTTAC 300 0.0 16.033333 1 CGCGCGT 70 0.002591216 15.857143 7 ACGGACC 70 0.002591216 15.857143 8 >>END_MODULE