##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088129_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 670065 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.451002514681413 31.0 31.0 34.0 30.0 34.0 2 31.638991739607352 31.0 31.0 34.0 30.0 34.0 3 31.733900442494384 31.0 31.0 34.0 30.0 34.0 4 35.47875952332983 37.0 35.0 37.0 33.0 37.0 5 35.37012528635282 37.0 35.0 37.0 33.0 37.0 6 35.3814958250319 37.0 35.0 37.0 33.0 37.0 7 35.23085820032385 37.0 35.0 37.0 32.0 37.0 8 35.26292523859625 37.0 35.0 37.0 32.0 37.0 9 36.75524016326774 39.0 36.0 39.0 32.0 39.0 10 36.625849730996244 39.0 35.0 39.0 32.0 39.0 11 36.71184138852201 39.0 35.0 39.0 32.0 39.0 12 36.58898315835031 39.0 35.0 39.0 32.0 39.0 13 36.59709878892346 39.0 35.0 39.0 32.0 39.0 14 37.55234193697626 39.0 36.0 41.0 32.0 41.0 15 37.563500555916214 39.0 36.0 41.0 32.0 41.0 16 37.437460544872515 39.0 36.0 41.0 32.0 41.0 17 37.48653339601382 39.0 36.0 41.0 32.0 41.0 18 37.474509189406994 39.0 36.0 41.0 32.0 41.0 19 37.53198271809451 39.0 36.0 41.0 32.0 41.0 20 37.44353607485841 39.0 36.0 41.0 32.0 41.0 21 37.33902681083178 39.0 36.0 41.0 31.0 41.0 22 37.28064292270153 39.0 36.0 41.0 31.0 41.0 23 37.043222672427305 39.0 36.0 40.0 31.0 41.0 24 36.9160797833046 39.0 36.0 40.0 31.0 41.0 25 36.8140807235119 39.0 35.0 40.0 30.0 41.0 26 36.8799026960071 39.0 36.0 40.0 31.0 41.0 27 36.78295389253282 39.0 35.0 40.0 30.0 41.0 28 36.65949124338684 39.0 35.0 40.0 30.0 41.0 29 36.561090341981746 39.0 35.0 40.0 30.0 41.0 30 36.386893808809596 38.0 35.0 40.0 30.0 41.0 31 36.20952295672808 38.0 35.0 40.0 30.0 41.0 32 36.07624633431085 38.0 35.0 40.0 30.0 41.0 33 35.866462208890184 38.0 35.0 40.0 29.0 41.0 34 35.712778611030274 38.0 34.0 40.0 28.0 41.0 35 35.4905912113004 38.0 34.0 40.0 27.0 41.0 36 35.38417019244402 38.0 34.0 40.0 26.0 41.0 37 35.236108437241164 38.0 34.0 40.0 26.0 41.0 38 35.102355741607155 38.0 34.0 40.0 25.0 41.0 39 35.0169595487005 38.0 34.0 40.0 25.0 41.0 40 34.78348070709558 38.0 33.0 40.0 24.0 41.0 41 34.651139814794085 38.0 33.0 40.0 23.0 41.0 42 34.4268839590189 38.0 33.0 40.0 22.0 41.0 43 34.09529075537448 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 1.0 15 6.0 16 7.0 17 26.0 18 53.0 19 121.0 20 265.0 21 535.0 22 905.0 23 1625.0 24 2571.0 25 4132.0 26 6113.0 27 8653.0 28 11790.0 29 15675.0 30 19819.0 31 24447.0 32 30085.0 33 36734.0 34 45608.0 35 54969.0 36 69626.0 37 93533.0 38 119451.0 39 123313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.508756613164394 22.906732928894957 14.01923693969988 22.565273518240765 2 17.89751740502787 22.65377239521539 36.12649519076507 23.322215008991666 3 19.843746502205008 25.755710266914406 32.10927298097946 22.291270249901128 4 13.209166274913628 15.390894913180064 35.16658831605889 36.23335049584742 5 11.230253781349571 40.87857148187116 34.30562706603091 13.58554767074836 6 31.89287606426242 36.10246767104684 15.364181086909479 16.640475177781262 7 25.17218478804295 35.025706461313455 20.91215031377553 18.889958436868064 8 28.325460962742422 33.80089991269504 19.830016490937446 18.043622633625095 9 25.51200256691515 13.747770738659682 23.145963451306965 37.594263243118206 10 16.48974353234388 27.80297433831046 33.070075291203096 22.637206838142568 11 31.873027243625618 21.596113809854266 24.80968264272869 21.721176303791424 12 19.91582906135972 27.40555020781566 31.645735861446276 21.032884869378343 13 31.26980218337027 20.79275891144889 28.440822905240537 19.496615999940303 14 20.79887772081813 22.18784744763568 27.896995067642692 29.116279763903503 15 23.170289449531015 28.748554244737452 26.56279614664249 21.518360159089045 16 22.11472021371061 28.56872094498295 26.194324431211896 23.122234410094546 17 19.683314305328587 26.789639811063104 27.449725026676518 26.07732085693179 18 20.88200398468805 26.713229313574054 31.604396588390678 20.800370113347213 19 20.210875064359428 24.514039682717346 32.65190690455403 22.623178348369187 20 25.191138173162305 23.699491840343846 31.178020042831665 19.931349943662184 21 24.118406423257447 24.745360524725214 29.833971331139512 21.302261720877823 22 22.201129741144516 24.193026049711595 31.272040772163894 22.33380343697999 23 21.223164916836428 26.336847917739327 32.445359778528946 19.9946273868953 24 19.96492877556655 25.238745494840053 30.611060121033034 24.185265608560364 25 21.092729809794573 26.584435838314192 31.5849954855126 20.737838866378635 26 22.934342190682994 25.29859043525628 30.07409728906897 21.692970084991757 27 21.240924387932512 27.051405460664263 29.695029586681887 22.012640564721334 28 21.123025378134958 26.14955265533941 29.986643086864706 22.74077887966093 29 20.0989456246782 25.960914239663317 31.209808003701134 22.730332131957347 30 19.36871796019789 26.217158036906866 33.240208039518556 21.17391596337669 31 20.91916455866222 25.743771126681743 31.96346623088805 21.37359808376799 32 22.209934857066106 25.6531829001664 29.818151970331236 22.31873027243626 33 23.12402528112944 25.749292979039346 29.47266309984852 21.654018639982688 34 21.128696469745474 28.726317596054113 29.52131509629663 20.623670837903784 35 19.77718579540791 29.531761844000208 29.75039734951087 20.940655011081013 36 20.741868326207157 25.566176415720864 32.203293710311684 21.488661547760294 37 20.946923059703163 26.127912963667704 31.111907053793285 21.813256922835844 38 21.050345861968616 25.462305895696684 32.24597613664346 21.24137210569124 39 22.25888533202003 24.83520255497601 31.956601225254268 20.949310887749697 40 20.502488564542247 25.586323714863486 30.95535507749248 22.95583264310179 41 21.385537224000657 25.261728339787933 30.852678471491572 22.500055964719838 42 19.089192839500647 27.09125234119078 31.254281301067806 22.565273518240765 43 19.78942341414639 26.66472655637886 30.874467402416183 22.67138262705857 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 40.0 1 57.0 2 74.0 3 201.5 4 329.0 5 329.0 6 594.0 7 859.0 8 995.5 9 1132.0 10 1876.0 11 2620.0 12 2620.0 13 4989.5 14 7359.0 15 11746.0 16 16133.0 17 15139.5 18 14146.0 19 14146.0 20 15233.5 21 16321.0 22 13157.5 23 9994.0 24 11025.5 25 12057.0 26 12057.0 27 13305.0 28 14553.0 29 15462.5 30 16372.0 31 17620.0 32 18868.0 33 18868.0 34 21026.0 35 23184.0 36 25566.0 37 27948.0 38 29712.5 39 31477.0 40 31477.0 41 32875.5 42 34274.0 43 39422.5 44 44571.0 45 57515.5 46 70460.0 47 70460.0 48 70938.0 49 71416.0 50 64785.0 51 58154.0 52 54591.0 53 51028.0 54 51028.0 55 44419.5 56 37811.0 57 31139.5 58 24468.0 59 21479.0 60 18490.0 61 18490.0 62 16360.0 63 14230.0 64 12532.5 65 10835.0 66 9180.0 67 7525.0 68 7525.0 69 6364.0 70 5203.0 71 4296.0 72 3389.0 73 2708.5 74 2028.0 75 2028.0 76 1601.5 77 1175.0 78 902.0 79 629.0 80 515.0 81 401.0 82 401.0 83 304.0 84 207.0 85 165.0 86 123.0 87 100.0 88 77.0 89 77.0 90 73.5 91 70.0 92 44.5 93 19.0 94 14.5 95 10.0 96 10.0 97 7.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 670065.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.09198130100591 #Duplication Level Percentage of deduplicated Percentage of total 1 84.22563990643565 47.243830186970456 2 9.28850733174073 10.420215591325146 3 2.611800403705033 4.395031782197472 4 1.103886649811825 2.4767675727869976 5 0.6204919702582827 1.7402311996575954 6 0.39988576456194463 1.3458230897008232 7 0.2692539953331954 1.0572093050015507 8 0.21215217617315132 0.9520028719097691 9 0.1539895866037468 0.7773822911094295 >10 0.9799524177437824 10.189608804577384 >50 0.07575577641121266 2.9558008974240093 >100 0.04721396252818586 5.461982671926253 >500 0.0064018932241545826 2.560346458894848 >1k 0.004001183265096614 4.329337586963676 >5k 0.001066982204025764 4.094429689554553 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8021 1.1970480475774739 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7698 1.1488437688880928 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6321 0.9433413176333638 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5325 0.7946990217366973 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3085 0.4604030952221053 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2906 0.4336892689515196 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2750 0.4104079454978249 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2408 0.35936812100318627 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2405 0.3589204032444614 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2101 0.31355167036033815 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1969 0.2938520889764426 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1868 0.27877892443270424 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1835 0.2738540290867304 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1495 0.2231126830979084 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1447 0.21594919895831002 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1248 0.18625058762955832 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1149 0.17147590159163661 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1143 0.17058046607418684 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1126 0.16804339877474572 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 984 0.14685142486176714 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 959 0.14312044353905964 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 895 0.13356913135292844 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 872 0.13013662853603755 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 853 0.12730108273077984 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 837 0.12491325468424704 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 799 0.11924216307373164 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 776 0.11580966025684075 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 772 0.11521270324520755 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 770 0.11491422473939095 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 760 0.11342183221030797 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 708 0.10566139105907636 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 693 0.10342280226545185 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 692 0.10327356301254356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.4923925290829995E-4 0.0 11 0.0 0.0 0.0 5.969570116331998E-4 0.0 12 0.0 0.0 0.0 5.969570116331998E-4 0.0 13 0.0 0.0 0.0 7.461962645414997E-4 0.0 14 0.0 0.0 0.0 0.0013431532761746996 0.0 15 0.0 0.0 0.0 0.0017908710348995994 0.0 16 0.0 0.0 0.0 0.0037309813227074987 0.0 17 0.0 0.0 0.0 0.006268048622148597 0.0 18 0.0 0.0 0.0 0.006715766380873497 0.0 19 0.0 0.0 0.0 0.006865005633781797 0.0 20 0.0 0.0 0.0 0.008954355174497997 0.0 21 0.0 0.0 0.0 0.011939140232663995 0.0 22 0.0 0.0 0.0 0.023729041212419692 0.0 23 0.0 0.0 0.0 0.039100684261974585 0.0 24 0.0 0.0 0.0 0.06044189742786148 0.0 25 0.0 0.0 0.0 0.06775462082036818 0.0 26 0.0 0.0 0.0 0.07805212927104087 0.0 27 0.0 0.0 0.0 0.12282390514353085 0.0 28 0.0 0.0 0.0 0.19654809608023102 0.0 29 0.0 0.0 0.0 0.2862408870781193 0.0 30 0.0 0.0 0.0 0.4750285420071187 0.0 31 0.0 0.0 0.0 0.689634587689254 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTCT 30 3.59789E-4 30.833334 15 GGTATCA 1890 0.0 29.36508 1 TTGACGG 35 8.865518E-4 26.428572 33 ATTGACG 35 8.865518E-4 26.428572 32 GTATTGG 215 0.0 24.953491 1 GCATTAT 40 0.001930351 23.125002 1 ATTGGAC 260 0.0 20.634615 3 CATGTGG 45 0.0038241674 20.555557 1 TCTATAC 75 9.256315E-6 19.733334 3 TATTGGA 275 0.0 18.836363 2 ACAACTA 120 5.162292E-9 18.5 8 AGTATGG 100 2.8704744E-7 18.5 2 CGATGCG 50 0.0070318943 18.5 33 CGCACAA 50 0.0070318943 18.5 33 ATACTCT 85 2.7203727E-5 17.411764 6 TTGGACC 415 0.0 17.385542 4 GTATCAA 3195 0.0 17.370893 2 TATACTC 75 2.0656452E-4 17.266666 5 TGTTAGT 65 0.0015790042 17.076923 8 ATACTGC 100 5.870432E-6 16.650002 6 >>END_MODULE