##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088128_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 636956 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.700217911441293 31.0 31.0 34.0 30.0 34.0 2 31.871297232461895 31.0 31.0 34.0 30.0 34.0 3 31.975109740704223 31.0 31.0 34.0 30.0 34.0 4 35.66366279617431 37.0 35.0 37.0 35.0 37.0 5 35.579997676448606 37.0 35.0 37.0 33.0 37.0 6 35.60811107831624 37.0 35.0 37.0 33.0 37.0 7 35.46374474845986 37.0 35.0 37.0 33.0 37.0 8 35.519203838255706 37.0 35.0 37.0 33.0 37.0 9 37.04142672335295 39.0 37.0 39.0 33.0 39.0 10 36.92020013941308 39.0 37.0 39.0 33.0 39.0 11 36.99033057228443 39.0 37.0 39.0 33.0 39.0 12 36.86734719509668 39.0 37.0 39.0 33.0 39.0 13 36.86790139350285 39.0 37.0 39.0 32.0 39.0 14 37.8769789436005 40.0 37.0 41.0 33.0 41.0 15 37.883398539302554 40.0 37.0 41.0 33.0 41.0 16 37.77731114865077 40.0 37.0 41.0 32.0 41.0 17 37.807901958691026 40.0 37.0 41.0 32.0 41.0 18 37.79789969793832 40.0 37.0 41.0 32.0 41.0 19 37.85159414465049 40.0 37.0 41.0 32.0 41.0 20 37.75912778904665 40.0 37.0 41.0 32.0 41.0 21 37.675877140650215 40.0 37.0 41.0 32.0 41.0 22 37.57471159703339 39.0 36.0 41.0 32.0 41.0 23 37.345956392592264 39.0 36.0 41.0 31.0 41.0 24 37.19374179692161 39.0 36.0 41.0 31.0 41.0 25 37.100515577214125 39.0 36.0 41.0 31.0 41.0 26 37.244462725839774 39.0 36.0 41.0 31.0 41.0 27 37.160800746048395 39.0 36.0 41.0 31.0 41.0 28 37.07290770477081 39.0 36.0 41.0 31.0 41.0 29 36.98541971501956 39.0 36.0 41.0 31.0 41.0 30 36.78364753609355 39.0 35.0 41.0 30.0 41.0 31 36.593017414075696 39.0 35.0 40.0 30.0 41.0 32 36.43939769780016 38.0 35.0 40.0 30.0 41.0 33 36.21908577672555 38.0 35.0 40.0 30.0 41.0 34 36.08607658927775 38.0 35.0 40.0 30.0 41.0 35 35.860244663681634 38.0 35.0 40.0 29.0 41.0 36 35.76630881881951 38.0 35.0 40.0 28.0 41.0 37 35.60566506948675 38.0 35.0 40.0 27.0 41.0 38 35.474057862709515 38.0 34.0 40.0 26.0 41.0 39 35.35083742048116 38.0 34.0 40.0 25.0 41.0 40 35.129340174203556 38.0 34.0 40.0 24.0 41.0 41 34.968754513655576 38.0 34.0 40.0 24.0 41.0 42 34.74010763694824 38.0 33.0 40.0 23.0 41.0 43 34.416595494822246 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 2.0 15 3.0 16 9.0 17 16.0 18 38.0 19 90.0 20 178.0 21 364.0 22 754.0 23 1369.0 24 2174.0 25 3296.0 26 4989.0 27 7076.0 28 9593.0 29 12753.0 30 16161.0 31 20169.0 32 25327.0 33 31813.0 34 39765.0 35 49554.0 36 64616.0 37 90685.0 38 119182.0 39 136979.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.98571957874641 22.642537318119306 13.860769032711836 22.510974070422446 2 17.727912132078195 22.813977731585855 36.436111756542054 23.021998379793896 3 19.711408637331306 25.88781642688035 32.25717317993708 22.143601755851268 4 12.878126589591746 15.556490558217522 35.45472528714699 36.11065756504374 5 11.051783796682974 41.04993123543855 34.42325686546637 13.475028102412098 6 31.733903126746586 36.507388265437484 15.420060412336174 16.338648195479752 7 25.25684662676857 35.10760554889192 20.83095221647963 18.804595607859884 8 28.348111957497853 33.823058421617816 19.739668046144473 18.089161574739858 9 25.63772065888382 13.861240022858723 23.07208033207945 37.42895898617801 10 16.34116014292981 28.12454863444257 32.93524199473747 22.599049227890152 11 31.880224065712547 21.852058854928753 24.604054283184396 21.663662796174304 12 20.077524978177458 27.55370857641658 31.718517448614975 20.65024899679099 13 31.321158761358713 20.898617800915606 28.26113577703954 19.51908766068614 14 20.746173990040127 22.349267453324874 28.02925162805594 28.875306928579054 15 23.080558154723406 29.00922512701034 26.519885204001532 21.39033151426472 16 21.94358794014029 28.893518547591984 26.190820088043758 22.972073424223964 17 19.588480208994028 27.13703929313799 27.52937408549413 25.745106412373854 18 20.93080212761949 26.790704538461057 31.4539779827806 20.824515351138853 19 20.092910656309073 24.717562908583954 32.722825438491824 22.466700996615153 20 25.0043959080376 23.939487185928073 31.289602421517344 19.766514484516982 21 23.897726059570836 24.945365142961208 30.064871042897785 21.092037754570175 22 22.275008006832497 24.332763958577985 31.353029094631342 22.039198939958176 23 21.1714780926783 26.465407343678372 32.361575995830165 20.001538567813164 24 19.93701291768976 25.43613687601655 30.789410885524276 23.83743932076941 25 21.119669176520826 26.64249963890755 31.615056613015657 20.62277457155596 26 22.805813902373163 25.347590728401965 30.382475398614663 21.464119970610216 27 21.2349047657923 26.957592047174373 29.92530096270386 21.88220222432947 28 21.080576994329277 26.095052091510247 30.1333216109119 22.691049303248576 29 19.975791106450053 26.16146170222119 31.385527414766486 22.477219776562272 30 19.398985173230177 26.53495688870189 33.214382155125314 20.85167578294262 31 20.751511878371502 25.92298369118118 32.05339144305101 21.272112987396305 32 22.10576554738475 25.896451246239927 30.01133516286839 21.98644804350693 33 23.045547887138202 25.734273638995468 29.668297339219663 21.551881134646663 34 20.986064971520797 28.6644603394897 29.88322584291537 20.46624884607414 35 19.77703326446411 29.46247464503043 30.146038344877823 20.614453745627642 36 20.668617612519547 25.7163760134138 32.27978070698761 21.335225667079044 37 20.829225252607717 26.231011247244705 31.383015467316422 21.556748032831152 38 21.06801725707898 25.563932202538325 32.238961560924146 21.129088979458547 39 22.01659141290764 25.084778226439504 32.17349393050697 20.72513643014588 40 20.32809173632088 25.784983578143546 31.14893336431402 22.73799132122156 41 21.329102795169526 25.392020798924886 31.025376949114225 22.253499456791364 42 19.013558236361693 27.018349776122687 31.676913318973366 22.291178668542255 43 19.78770904112686 26.820062924283622 30.85456452251019 22.537663512079327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 30.0 1 59.0 2 88.0 3 202.5 4 317.0 5 317.0 6 535.5 7 754.0 8 915.5 9 1077.0 10 1712.0 11 2347.0 12 2347.0 13 4699.0 14 7051.0 15 11356.0 16 15661.0 17 14594.5 18 13528.0 19 13528.0 20 14725.0 21 15922.0 22 12923.5 23 9925.0 24 11291.0 25 12657.0 26 12657.0 27 13850.0 28 15043.0 29 16097.5 30 17152.0 31 18329.5 32 19507.0 33 19507.0 34 21286.5 35 23066.0 36 24844.0 37 26622.0 38 28202.5 39 29783.0 40 29783.0 41 31144.0 42 32505.0 43 37186.5 44 41868.0 45 53244.0 46 64620.0 47 64620.0 48 65416.5 49 66213.0 50 59933.5 51 53654.0 52 50466.5 53 47279.0 54 47279.0 55 40996.0 56 34713.0 57 29315.5 58 23918.0 59 20964.5 60 18011.0 61 18011.0 62 15827.0 63 13643.0 64 11908.5 65 10174.0 66 8567.5 67 6961.0 68 6961.0 69 5883.0 70 4805.0 71 4043.0 72 3281.0 73 2657.0 74 2033.0 75 2033.0 76 1581.0 77 1129.0 78 883.0 79 637.0 80 534.0 81 431.0 82 431.0 83 326.5 84 222.0 85 175.0 86 128.0 87 110.0 88 92.0 89 92.0 90 78.5 91 65.0 92 44.0 93 23.0 94 19.5 95 16.0 96 16.0 97 9.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 636956.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.52027288325275 #Duplication Level Percentage of deduplicated Percentage of total 1 84.58440786393612 48.65318222001956 2 9.288697564522758 10.685768372827086 3 2.5421218221013078 4.3867062272921675 4 1.0210939452888133 2.349344094897988 5 0.5506143837291282 1.583574480277175 6 0.36774378808936287 1.2691633825212736 7 0.25875359249901825 1.0418504075045858 8 0.2089848316331997 0.9616691635201825 9 0.14062934400736596 0.7280134418426865 >10 0.9124764717558015 9.87725469139947 >50 0.07206529060692698 2.864280655137397 >100 0.042584020237026066 5.310112970827193 >500 0.004913540796578667 2.060045600912036 >1k 0.0040946173304822215 4.7913331944992965 >5k 8.189234660964445E-4 3.43770109652196 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8030 1.2606836264985337 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7513 1.1795163245184912 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6351 0.9970861409579312 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4922 0.7727378343245059 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3142 0.49328368050540383 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2537 0.39830066755003485 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2380 0.37365218319632754 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2188 0.34350881379561543 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2062 0.32372722762639805 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2040 0.3202732998825665 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1795 0.2818091045535327 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1734 0.27223230490018147 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1584 0.24868279755587513 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1435 0.2252902869271975 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1325 0.2080206482080395 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1220 0.19153599306702504 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1135 0.17819127223858477 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1016 0.1595086630787684 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 986 0.15479876160990713 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 943 0.1480479028378726 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 901 0.14145404078146684 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 831 0.13046427068745722 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 822 0.12905130024679884 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 820 0.1287373068155414 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 808 0.1268533462279969 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 766 0.12025948417159113 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 744 0.11680555642775953 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 721 0.11319463196829924 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 641 0.1006348947180025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 3.139934312574181E-4 0.0 11 0.0 0.0 0.0 3.139934312574181E-4 0.0 12 0.0 0.0 0.0 9.419802937722543E-4 0.0 13 0.0 0.0 0.0 0.0012559737250296724 0.0 14 0.0 0.0 0.0 0.0015699671562870905 0.0 15 0.0 0.0 0.0 0.002040957303173218 0.0 16 0.0 0.0 0.0 0.004081914606346436 0.0 17 0.0 0.0 0.0 0.005965875193890944 0.0 18 0.0 0.0 0.0 0.006750858772034489 0.0 19 0.0 0.0 0.0 0.007535842350178034 0.0 20 0.0 0.0 0.0 0.00989079308460867 0.0 21 0.0 0.0 0.0 0.015856668278499613 0.0 22 0.0 0.0 0.0 0.025276471216222157 0.0 23 0.0 0.0 0.0 0.03956317233843468 0.0 24 0.0 0.0 0.0 0.0573038012044788 0.0 25 0.0 0.0 0.0 0.06499664027028555 0.0 26 0.0 0.0 0.0 0.0726894793360923 0.0 27 0.0 0.0 0.0 0.11806153015278921 0.0 28 0.0 0.0 0.0 0.18494213101061927 0.0 29 0.0 0.0 0.0 0.28180910455353275 0.0 30 0.0 0.0 0.0 0.45089456728565236 0.0 31 0.0 0.0 0.0 0.6427445537839348 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1755 0.0 28.566952 1 TCGTATA 35 8.865037E-4 26.42857 13 CGCAAGA 50 2.7002697E-4 22.2 2 CGGACCA 50 2.7002697E-4 22.2 9 ACTTCGA 60 3.72293E-5 21.583332 7 GCGCAAG 60 3.72293E-5 21.583332 1 TATAGTG 70 5.0960316E-6 21.142857 5 AAGACGG 90 9.461655E-8 20.555555 5 CGTCTGT 105 2.2546374E-8 19.380953 34 GTATTGG 330 0.0 18.500002 1 TAGACAG 60 9.230654E-4 18.5 5 ATTACTC 90 2.1491524E-6 18.5 3 GTCTAAC 60 9.230654E-4 18.5 1 GACGGAC 60 9.230654E-4 18.5 7 CCGAATT 80 1.6148266E-5 18.5 14 ATAGTGT 70 1.2181148E-4 18.5 6 TAAGCTA 50 0.0070315227 18.5 33 TAGTAGT 50 0.0070315227 18.5 4 CGAAGCT 60 9.230654E-4 18.5 11 ATTGGAC 335 0.0 18.223883 3 >>END_MODULE