##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088125_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2855097 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.466901825051828 31.0 31.0 34.0 30.0 34.0 2 31.639349205998954 31.0 31.0 34.0 30.0 34.0 3 31.713318321584172 31.0 31.0 34.0 30.0 34.0 4 35.45060535596514 37.0 35.0 37.0 33.0 37.0 5 35.343033529158554 37.0 35.0 37.0 33.0 37.0 6 35.37156075607939 37.0 35.0 37.0 33.0 37.0 7 35.22881219096934 37.0 35.0 37.0 32.0 37.0 8 35.26744450363683 37.0 35.0 37.0 32.0 37.0 9 36.73530076211071 39.0 35.0 39.0 32.0 39.0 10 36.60205274987155 39.0 35.0 39.0 32.0 39.0 11 36.69248680517685 39.0 35.0 39.0 32.0 39.0 12 36.57909766288151 38.0 35.0 39.0 32.0 39.0 13 36.59996560537173 39.0 35.0 39.0 32.0 39.0 14 37.529226502637215 39.0 36.0 41.0 32.0 41.0 15 37.54997185734845 39.0 36.0 41.0 32.0 41.0 16 37.40870380235768 39.0 36.0 41.0 32.0 41.0 17 37.48178082916272 39.0 36.0 41.0 32.0 41.0 18 37.48005619423788 39.0 36.0 41.0 32.0 41.0 19 37.53236965329024 39.0 36.0 41.0 32.0 41.0 20 37.449598384923526 39.0 36.0 41.0 32.0 41.0 21 37.376054824056766 39.0 36.0 41.0 31.0 41.0 22 37.30604354247859 39.0 36.0 41.0 31.0 41.0 23 37.08559954355316 39.0 36.0 40.0 31.0 41.0 24 36.945243891888786 39.0 36.0 40.0 31.0 41.0 25 36.84925450869095 39.0 35.0 40.0 30.0 41.0 26 36.90594154944648 39.0 36.0 40.0 31.0 41.0 27 36.79222457240507 39.0 35.0 40.0 30.0 41.0 28 36.675673015662866 39.0 35.0 40.0 30.0 41.0 29 36.561458682489594 39.0 35.0 40.0 30.0 41.0 30 36.36965118873369 38.0 35.0 40.0 30.0 41.0 31 36.18356889450691 38.0 35.0 40.0 30.0 41.0 32 36.02642256988116 38.0 35.0 40.0 30.0 41.0 33 35.809294045000925 38.0 35.0 40.0 29.0 41.0 34 35.65504009145749 38.0 34.0 40.0 28.0 41.0 35 35.44480870527341 38.0 34.0 40.0 27.0 41.0 36 35.3298549926675 38.0 34.0 40.0 26.0 41.0 37 35.16633935729679 38.0 34.0 40.0 25.0 41.0 38 35.00658366423277 38.0 34.0 40.0 25.0 41.0 39 34.88880517894839 38.0 33.0 40.0 24.0 41.0 40 34.65852403613607 38.0 33.0 40.0 23.0 41.0 41 34.48863698851563 38.0 33.0 40.0 23.0 41.0 42 34.25490937786002 38.0 33.0 40.0 21.0 41.0 43 33.90375458346949 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 13.0 14 13.0 15 16.0 16 42.0 17 96.0 18 254.0 19 508.0 20 1168.0 21 2168.0 22 4182.0 23 7183.0 24 11655.0 25 18390.0 26 26703.0 27 37667.0 28 51513.0 29 67432.0 30 85250.0 31 105565.0 32 129559.0 33 158251.0 34 193073.0 35 234574.0 36 295856.0 37 396188.0 38 496022.0 39 531751.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.31407689476049 23.135501175616803 14.47302841199441 22.077393517628295 2 17.99399459983321 22.93785465082272 36.015273736759205 23.05287701258486 3 19.952772182521294 25.583193845953396 32.52092660949873 21.943107362026577 4 13.234716718906572 15.741916999667612 34.672762431539105 36.35060384988671 5 10.9793817863281 41.17502837907083 34.11162562953203 13.733964205069041 6 31.702950897990505 36.09446544197973 15.080713544933849 17.121870115095913 7 24.692506068970687 35.659979328197956 20.666268081259588 18.98124652157177 8 28.409262452379025 33.90756951515132 19.61975372465454 18.063414307815112 9 25.300471402547792 13.839915071186724 23.502564010960047 37.357049515305434 10 16.69999303000914 28.365551152903034 32.69275965054778 22.241696166540052 11 31.64887217492085 21.795021325019782 24.596011974374253 21.96009452568512 12 19.958621370832585 27.908754063347057 31.442574455438816 20.690050110381538 13 31.444851085619856 20.963911208620935 28.66081257484422 18.93042513091499 14 20.617338044907054 22.68378272261853 28.476195379701636 28.22268385277278 15 23.25017328658186 29.04097478999838 26.719967832966795 20.98888409045297 16 21.920761361172666 28.43910382029052 26.79429105210786 22.845843766428953 17 19.28782104425874 27.267199678329668 27.887493839964105 25.557485437447486 18 20.41419258259877 26.586452229118663 32.31004060457491 20.689314583707663 19 19.819746929789076 24.76858054209717 33.653217386309464 21.75845514180429 20 24.70248821668756 23.557553386102118 32.32552168980599 19.414436707404338 21 23.663294101741553 24.693311645803977 30.88073715183757 20.762657100616895 22 21.912915743318003 24.057606449097875 32.16370582155352 21.865771986030598 23 20.83344278670742 26.414514112830496 33.22153327890436 19.530509821557725 24 19.478287427712612 25.312870280764542 31.493605996573848 23.715236294948998 25 20.73754411846603 26.439416944503115 32.67020349921561 20.15283543781525 26 22.40522826369822 25.243590673101473 31.054811797987945 21.296369265212356 27 20.923772467275192 26.955371393686452 30.578891014911225 21.54196512412713 28 20.63936882004359 26.162963990365302 30.853067338867994 22.34459985072311 29 19.44799073376491 26.090321975050234 32.26643438033804 22.19525291084681 30 18.90531214876412 26.193575910030376 34.23526416090241 20.665847780303086 31 20.40704746633827 25.622597060625264 32.86697439701698 21.103381076019485 32 21.731976181544795 25.867282267467623 30.81506512738446 21.58567642360312 33 22.779471240381675 25.791452969899098 30.29525791943321 21.133817870286016 34 20.730118801567862 28.661688201836927 30.39963265696402 20.208560339631195 35 19.37090053332689 29.39917628017542 30.71097059049132 20.518952596006372 36 20.24792852922335 25.444984881424343 33.175650424486456 21.131436164865853 37 20.327680635719204 25.864830511888037 32.29659097396691 21.510897878425848 38 20.6415053499058 25.262399140904847 33.170046411733125 20.926049097456236 39 21.753761781123373 24.80644265326187 32.928338336665966 20.51145722894879 40 20.048250549806188 25.499133654653416 31.960805534803193 22.491810260737203 41 20.85417763389475 25.237286158753975 31.796713036369695 22.11182317098158 42 18.38049635441458 26.93337564362962 32.244683805839166 22.44144419611663 43 19.177492043177516 26.639199999159395 31.762423483335244 22.420884474327842 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 161.0 1 318.5 2 476.0 3 965.5 4 1455.0 5 1455.0 6 2809.5 7 4164.0 8 4835.5 9 5507.0 10 8821.0 11 12135.0 12 12135.0 13 23911.5 14 35688.0 15 57803.5 16 79919.0 17 74663.5 18 69408.0 19 69408.0 20 75523.0 21 81638.0 22 64240.0 23 46842.0 24 51049.5 25 55257.0 26 55257.0 27 59691.0 28 64125.0 29 67075.0 30 70025.0 31 75723.0 32 81421.0 33 81421.0 34 88797.5 35 96174.0 36 106243.0 37 116312.0 38 123349.5 39 130387.0 40 130387.0 41 138404.0 42 146421.0 43 169098.0 44 191775.0 45 247434.0 46 303093.0 47 303093.0 48 305026.5 49 306960.0 50 275872.5 51 244785.0 52 227170.0 53 209555.0 54 209555.0 55 180639.0 56 151723.0 57 124807.5 58 97892.0 59 85039.5 60 72187.0 61 72187.0 62 63707.0 63 55227.0 64 48267.0 65 41307.0 66 35164.0 67 29021.0 68 29021.0 69 24448.5 70 19876.0 71 16865.0 72 13854.0 73 11210.0 74 8566.0 75 8566.0 76 6701.5 77 4837.0 78 3807.0 79 2777.0 80 2287.0 81 1797.0 82 1797.0 83 1410.0 84 1023.0 85 778.5 86 534.0 87 431.5 88 329.0 89 329.0 90 302.5 91 276.0 92 187.5 93 99.0 94 76.5 95 54.0 96 54.0 97 35.0 98 16.0 99 17.5 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2855097.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.579781598208 #Duplication Level Percentage of deduplicated Percentage of total 1 74.55444953489328 30.25403279300589 2 12.998467938940506 10.54949980147029 3 4.991506522303253 6.076627335632902 4 2.330219458359269 3.782391867844547 5 1.296478483291813 2.6305406849378867 6 0.8031118120872905 1.955406116006599 7 0.5382850272661481 1.5290442190832008 8 0.36422608450824373 1.1824171969371984 9 0.2736831621687473 0.9995402653123234 >10 1.5776409979442907 12.136131739889395 >50 0.15874343567730248 4.489432023949093 >100 0.0963132370201799 7.273044354363302 >500 0.007961210818664882 2.157436749018593 >1k 0.0074420014174468845 6.210803826437102 >5k 7.788141018258368E-4 2.3744867269747916 >10k+ 6.92279201622966E-4 6.399164299136976 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40813 1.4294785781358743 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40112 1.4049259972603383 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31269 1.095199217399619 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 20998 0.7354566237154114 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15080 0.5281782020015432 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 12140 0.4252044676590672 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11078 0.38800783300882596 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10741 0.3762043811471204 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9610 0.33659101599700464 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9314 0.3262235924033404 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8835 0.3094465792230527 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8322 0.2914787133326819 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7900 0.2766981296957687 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6601 0.23120055115465427 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6192 0.2168752935539493 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5722 0.2004135060910365 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5123 0.17943348334574974 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4756 0.1665792790927944 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4426 0.1550210027890471 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4146 0.14521398047071607 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4140 0.1450038299924661 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4029 0.14111604614484202 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3998 0.14003026867388393 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3953 0.1384541400870093 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3886 0.1361074597465515 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3673 0.12864711776867827 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3616 0.12665068822530373 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3535 0.12381365676892939 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3222 0.11285080682022362 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3085 0.10805237090018306 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3059 0.10714171882776663 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2887 0.10111740511793468 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2887 0.10111740511793468 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.502507970832514E-5 0.0 0.0 0.0 6 3.502507970832514E-5 3.502507970832514E-5 0.0 0.0 0.0 7 3.502507970832514E-5 3.502507970832514E-5 0.0 0.0 0.0 8 1.0507523912497544E-4 3.502507970832514E-5 0.0 0.0 0.0 9 1.0507523912497544E-4 3.502507970832514E-5 0.0 1.7512539854162574E-4 0.0 10 1.0507523912497544E-4 3.502507970832514E-5 0.0 3.852758767915766E-4 0.0 11 1.0507523912497544E-4 3.502507970832514E-5 0.0 6.654765144581778E-4 0.0 12 1.0507523912497544E-4 3.502507970832514E-5 0.0 0.0010507523912497544 0.0 13 1.0507523912497544E-4 3.502507970832514E-5 0.0 0.0012959279492080304 0.0 14 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.0017862790651245824 0.0 15 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.0024867806592910853 0.0 16 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.0037476835287907906 0.0 17 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.005849188311290299 0.0 18 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.0065496899054568024 0.0 19 1.7512539854162574E-4 3.502507970832514E-5 0.0 0.007425316898164931 0.0 20 2.4517555795827603E-4 3.502507970832514E-5 0.0 0.009701947079206066 0.0 21 2.4517555795827603E-4 3.502507970832514E-5 0.0 0.01334455536887188 0.0 22 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.022240925614786466 0.0 23 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.03421950287503367 0.0 24 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.049700588106113386 0.0 25 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.05625027801157018 0.0 26 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.06504157301835979 0.0 27 2.8020063766660114E-4 3.502507970832514E-5 0.0 0.11940049672568043 0.0 28 2.8020063766660114E-4 7.005015941665029E-5 0.0 0.20997535285140925 0.0 29 2.8020063766660114E-4 7.005015941665029E-5 0.0 0.3201642536138002 0.0 30 3.152257173749263E-4 7.005015941665029E-5 0.0 0.5369694970083329 0.0 31 3.152257173749263E-4 7.005015941665029E-5 0.0 0.8062773348856449 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9295 0.0 29.635826 1 ATTGGAC 1125 0.0 20.555555 3 GTATTGG 1220 0.0 19.713116 1 TTGGACC 1660 0.0 19.28012 4 TATTGGA 1320 0.0 18.079546 2 GTATCAA 15310 0.0 17.980404 2 CTGTGCG 210 0.0 17.61905 9 TGGACCC 1830 0.0 17.286884 5 ACGTTTA 230 0.0 16.891304 26 ATCACGT 220 0.0 16.818182 23 GGACCCT 1845 0.0 16.644987 6 CACGGTA 80 3.384766E-4 16.1875 32 GCGCTTA 80 3.384766E-4 16.1875 18 CGTCTGT 850 0.0 16.105883 34 TCACGTT 230 0.0 16.086956 24 GACCCTC 1915 0.0 15.939947 7 CATACGC 70 0.0025937578 15.857142 12 TGCGACG 95 7.065541E-5 15.578948 22 TTTTTAC 1985 0.0 15.377834 1 CTAGCGG 110 1.4532909E-5 15.136364 29 >>END_MODULE