##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088124_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2056220 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.476939238019277 31.0 31.0 34.0 30.0 34.0 2 31.64030794370252 31.0 31.0 34.0 30.0 34.0 3 31.722572487379754 31.0 31.0 34.0 30.0 34.0 4 35.46030434486582 37.0 35.0 37.0 33.0 37.0 5 35.35598914513039 37.0 35.0 37.0 33.0 37.0 6 35.38729124315491 37.0 35.0 37.0 33.0 37.0 7 35.234568285494746 37.0 35.0 37.0 32.0 37.0 8 35.28107303693184 37.0 35.0 37.0 32.0 37.0 9 36.7456415169583 39.0 35.0 39.0 32.0 39.0 10 36.61985828364669 39.0 35.0 39.0 32.0 39.0 11 36.712848819678825 39.0 35.0 39.0 32.0 39.0 12 36.58562167472352 39.0 35.0 39.0 32.0 39.0 13 36.61346159457646 39.0 35.0 39.0 32.0 39.0 14 37.531029267296304 39.0 36.0 41.0 32.0 41.0 15 37.55072171265721 39.0 36.0 41.0 32.0 41.0 16 37.41552217175205 39.0 36.0 41.0 32.0 41.0 17 37.48471758858488 39.0 36.0 41.0 32.0 41.0 18 37.485140695061816 39.0 36.0 41.0 32.0 41.0 19 37.53710546536849 39.0 36.0 41.0 32.0 41.0 20 37.45646720681639 39.0 36.0 41.0 32.0 41.0 21 37.37478917625546 39.0 36.0 41.0 31.0 41.0 22 37.30575911137913 39.0 36.0 41.0 31.0 41.0 23 37.08313896372956 39.0 36.0 40.0 31.0 41.0 24 36.943574617502016 39.0 36.0 40.0 31.0 41.0 25 36.84267199035123 39.0 35.0 40.0 30.0 41.0 26 36.90325937886024 39.0 36.0 40.0 31.0 41.0 27 36.79192644755911 39.0 35.0 40.0 30.0 41.0 28 36.6832551964284 39.0 35.0 40.0 30.0 41.0 29 36.56809825796851 39.0 35.0 40.0 30.0 41.0 30 36.368825806577114 38.0 35.0 40.0 30.0 41.0 31 36.166838178794094 38.0 35.0 40.0 30.0 41.0 32 36.012629971501106 38.0 35.0 40.0 30.0 41.0 33 35.79072035093521 38.0 34.0 40.0 29.0 41.0 34 35.62990049702853 38.0 34.0 40.0 28.0 41.0 35 35.402080030346944 38.0 34.0 40.0 27.0 41.0 36 35.29146492106876 38.0 34.0 40.0 26.0 41.0 37 35.116918909455215 38.0 34.0 40.0 25.0 41.0 38 34.957442297030475 38.0 33.0 40.0 25.0 41.0 39 34.837105465368495 38.0 33.0 40.0 24.0 41.0 40 34.59318458141639 38.0 33.0 40.0 23.0 41.0 41 34.4249773856883 38.0 33.0 40.0 23.0 41.0 42 34.18040384783729 38.0 33.0 40.0 21.0 41.0 43 33.83107498224898 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 2.0 13 6.0 14 4.0 15 22.0 16 25.0 17 79.0 18 137.0 19 368.0 20 780.0 21 1564.0 22 2985.0 23 5123.0 24 8400.0 25 13334.0 26 19330.0 27 27075.0 28 37178.0 29 48818.0 30 61830.0 31 76181.0 32 92851.0 33 114037.0 34 140008.0 35 168490.0 36 214663.0 37 287810.0 38 359605.0 39 375514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.55830601783856 23.055023295172695 14.266955870480786 22.11971481650796 2 18.112507416521577 22.879458423709526 35.98792930717531 23.020104852593594 3 20.023732869050978 25.513952787153126 32.45693554191672 22.00537880187918 4 13.107255060256199 15.497806654929919 34.58579334896071 36.80914493585317 5 10.903697075215687 41.27928918111875 34.17800624446801 13.639007499197556 6 32.0084913092957 35.871210279055745 15.011428738170041 17.10886967347852 7 24.928995924560603 35.528931729095135 20.45350205717287 19.088570289171393 8 28.713950841835988 33.57301261538162 19.503506434136426 18.209530108645964 9 25.368297166645593 13.741671611014386 23.419235295834103 37.470795926505915 10 16.650017994183504 28.35756874264427 32.70724922430479 22.285164038867435 11 31.504216474890818 21.68133760006225 24.654317145052573 22.16012877999436 12 20.067210707025513 27.886267033683165 31.381418330723363 20.665103928567955 13 31.68245615741506 20.881569092801357 28.471467060917604 18.96450768886598 14 20.720788631566663 22.625740436334635 28.302564900642928 28.35090603145578 15 23.268327319061193 29.036922119228485 26.77782532997442 20.916925231735902 16 21.893377167812783 28.449582243145187 26.677349699934833 22.979690889107196 17 19.270214276682456 27.16552703504489 27.711042592718677 25.853216095553975 18 20.47499781151822 26.42217272470845 32.31434379589733 20.788485667876007 19 19.843499236463025 24.553209286944004 33.55360807695675 22.049683399636226 20 24.906041182363754 23.493011448191343 32.21313867193199 19.387808697512913 21 23.91558296291253 24.504090029277023 30.864498934938865 20.71582807287158 22 21.914046162375623 24.04518971705362 32.050558792347125 21.990205328223634 23 20.835124646195446 26.341587962377567 33.19056326657653 19.632724124850455 24 19.507056637908395 25.314703679567362 31.351995409051558 23.826244273472682 25 20.73513534543969 26.471389248232192 32.57632938109735 20.217146025230765 26 22.536304481038023 25.016437929793504 31.071042981782103 21.376214607386366 27 20.880401902520155 26.861084903366372 30.59862271546819 21.65989047864528 28 20.72399840483995 26.05338922877902 30.77496571378549 22.44764665259554 29 19.557878048068787 26.108636235422278 32.0829483226503 22.250537393858632 30 18.963535030298313 26.31770919454144 34.118917236482474 20.599838538677766 31 20.51954557391719 25.619632140529706 32.785596871930046 21.075225413623055 32 21.85977181430003 25.854966880975773 30.663401776074544 21.621859528649658 33 22.857038643724895 25.73216873680832 30.109424088862085 21.3013685306047 34 20.70580968962465 28.782669169641377 30.368005369075295 20.143515771658674 35 19.335187869002343 29.633696783418117 30.618756747818814 20.412358599760726 36 20.366935444650863 25.523387575259456 33.03950939101847 21.07016758907121 37 20.390376516131543 26.07838655396796 32.1227786909961 21.408458238904398 38 20.716168503370262 25.430255517405726 32.979496357393664 20.87407962183035 39 21.809339467566698 24.907694701928783 32.86457674762428 20.418389082880235 40 20.044304597757048 25.604312768089017 31.81303557012382 22.538347064030116 41 20.94853663518495 25.293159292293627 31.68410967698009 22.074194395541333 42 18.412572584645613 27.042242561593604 32.09233447782825 22.452850375932538 43 19.21837157502602 26.76853644065324 31.621664996936126 22.39142698738462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 241.0 2 327.0 3 728.0 4 1129.0 5 1129.0 6 2104.5 7 3080.0 8 3539.5 9 3999.0 10 6543.0 11 9087.0 12 9087.0 13 17778.5 14 26470.0 15 42612.5 16 58755.0 17 54928.0 18 51101.0 19 51101.0 20 54575.0 21 58049.0 22 45456.0 23 32863.0 24 36313.5 25 39764.0 26 39764.0 27 43557.0 28 47350.0 29 49844.0 30 52338.0 31 55454.0 32 58570.0 33 58570.0 34 63503.5 35 68437.0 36 74326.5 37 80216.0 38 84629.0 39 89042.0 40 89042.0 41 94063.5 42 99085.0 43 116069.0 44 133053.0 45 173288.5 46 213524.0 47 213524.0 48 216578.0 49 219632.0 50 198318.5 51 177005.0 52 165452.5 53 153900.0 54 153900.0 55 134227.0 56 114554.0 57 94430.5 58 74307.0 59 65209.5 60 56112.0 61 56112.0 62 49224.0 63 42336.0 64 36788.5 65 31241.0 66 26298.0 67 21355.0 68 21355.0 69 18068.0 70 14781.0 71 12386.0 72 9991.0 73 8128.0 74 6265.0 75 6265.0 76 4957.0 77 3649.0 78 2868.5 79 2088.0 80 1635.0 81 1182.0 82 1182.0 83 898.0 84 614.0 85 476.5 86 339.0 87 276.5 88 214.0 89 214.0 90 194.0 91 174.0 92 110.0 93 46.0 94 36.0 95 26.0 96 26.0 97 17.0 98 8.0 99 7.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2056220.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.904817492291855 #Duplication Level Percentage of deduplicated Percentage of total 1 76.36085265651494 33.52609299440078 2 12.789358995421694 11.230289450747811 3 4.532464540640835 5.96991085341361 4 2.0325724951834263 3.569588977635224 5 1.099396747046705 2.4134406765352465 6 0.646133405311012 1.7021021541511818 7 0.4066749019563859 1.2498491144363564 8 0.29592915514951773 1.0394172437990157 9 0.21874056781191822 0.8643388237148303 >10 1.3886930454166764 11.696524742227986 >50 0.14025034981690632 4.26576195720545 >100 0.07411176009142868 6.253850147272163 >500 0.00624058090044768 1.9450954795819466 >1k 0.0070206535130036395 5.849132798215634 >5k 0.001002950501857663 3.0840197048041462 >10k+ 5.57194723254257E-4 5.340584881858578 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29807 1.449601696316542 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28995 1.4101117584694245 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23128 1.1247823676454853 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15843 0.7704914843742401 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11381 0.5534913579286262 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8672 0.42174475493867386 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8252 0.401318925017751 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8205 0.39903317738374294 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7621 0.3706315472079836 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7109 0.345731487875811 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6345 0.3085759305910846 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5898 0.2868370116038167 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5893 0.286593846961901 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5038 0.245012693194308 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4678 0.22750483897637414 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4041 0.1965256635963078 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4004 0.19472624524613125 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3504 0.17040978105455643 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3290 0.16000233438056238 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3097 0.1506161792026145 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3068 0.14920582427950316 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3022 0.14696870957387828 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2937 0.14283491066131057 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2894 0.14074369474083512 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2829 0.1375825543959304 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2712 0.1318925017751019 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2700 0.1313089066345041 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2473 0.1202692318915291 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2424 0.11788621840075478 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2244 0.10913229129178785 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2203 0.10713834122807872 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2173 0.10567935337658421 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2100 0.10212914960461429 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 4.8632928383149665E-5 0.0 0.0 0.0 0.0 7 4.8632928383149665E-5 0.0 0.0 0.0 0.0 8 1.45898785149449E-4 0.0 0.0 0.0 0.0 9 1.45898785149449E-4 0.0 0.0 1.45898785149449E-4 0.0 10 1.45898785149449E-4 0.0 0.0 2.91797570298898E-4 0.0 11 1.45898785149449E-4 0.0 0.0 5.349622122146463E-4 0.0 12 1.45898785149449E-4 0.0 0.0 0.0010699244244292926 0.0 13 1.45898785149449E-4 0.0 0.0 0.0012158232095787415 0.0 14 1.45898785149449E-4 0.0 0.0 0.0015076207798776396 0.0 15 1.45898785149449E-4 0.0 0.0 0.0022371147056248846 0.0 16 1.45898785149449E-4 0.0 0.0 0.003987900127418272 0.0 17 1.45898785149449E-4 0.0 0.0 0.006030483119510558 0.0 18 1.45898785149449E-4 0.0 0.0 0.007100407543939851 0.0 19 1.45898785149449E-4 0.0 0.0 0.008316230753518592 0.0 20 1.45898785149449E-4 0.0 0.0 0.010796510101059226 0.0 21 1.45898785149449E-4 0.0 0.0 0.015027574870393245 0.0 22 1.45898785149449E-4 0.0 0.0 0.025726819114686172 0.0 23 1.45898785149449E-4 0.0 0.0 0.04021943177286477 0.0 24 1.9453171353259866E-4 0.0 0.0 0.05928353969905944 0.0 25 1.9453171353259866E-4 0.0 0.0 0.0654112886753363 0.0 26 1.9453171353259866E-4 0.0 0.0 0.07440838042621899 0.0 27 1.9453171353259866E-4 0.0 0.0 0.12522979058661038 0.0 28 1.9453171353259866E-4 0.0 0.0 0.20921885790430986 0.0 29 3.890634270651973E-4 0.0 0.0 0.3077978037369542 0.0 30 3.890634270651973E-4 0.0 0.0 0.5060256198266723 0.0 31 3.890634270651973E-4 0.0 0.0 0.74670998239488 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6960 0.0 28.308187 1 TAATACG 65 2.6845573E-6 22.76923 4 GTATTGG 860 0.0 22.156977 1 ATTGGAC 875 0.0 21.142857 3 TTGGACC 1430 0.0 18.499998 4 GGACCCT 1450 0.0 18.11724 6 TGGACCC 1625 0.0 17.532307 5 GTATCAA 11395 0.0 17.225538 2 TATTGGA 1115 0.0 16.591928 2 ACGTTTA 145 2.9831426E-9 16.586206 26 CGTCTGT 645 0.0 16.348837 34 CGATTAG 105 9.350195E-6 15.857142 1 TTTTTAC 1360 0.0 15.643381 1 CGATCTG 215 0.0 15.488372 33 TAGGGGT 145 5.3516487E-8 15.310345 4 TCTATAC 145 5.3516487E-8 15.310345 3 CGACGAA 255 0.0 15.235294 10 ACGGACC 85 5.366709E-4 15.235293 8 TCTGTCG 100 1.0940306E-4 14.799999 8 ACGATCT 230 1.8189894E-12 14.478261 32 >>END_MODULE