##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088123_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2973963 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.619281073772605 31.0 31.0 34.0 30.0 34.0 2 31.79947968417899 31.0 31.0 34.0 30.0 34.0 3 31.89698325096849 31.0 31.0 34.0 30.0 34.0 4 35.6046043612513 37.0 35.0 37.0 33.0 37.0 5 35.490822515276754 37.0 35.0 37.0 33.0 37.0 6 35.50395852268505 37.0 35.0 37.0 33.0 37.0 7 35.3745967922264 37.0 35.0 37.0 33.0 37.0 8 35.4127408444557 37.0 35.0 37.0 33.0 37.0 9 36.935712717340465 39.0 37.0 39.0 33.0 39.0 10 36.79292714805127 39.0 37.0 39.0 32.0 39.0 11 36.8590322071929 39.0 37.0 39.0 33.0 39.0 12 36.74774131352677 39.0 35.0 39.0 32.0 39.0 13 36.76024146904316 39.0 35.0 39.0 32.0 39.0 14 37.78893046080264 40.0 37.0 41.0 32.0 41.0 15 37.795609763806745 40.0 37.0 41.0 32.0 41.0 16 37.68268468706571 39.0 37.0 41.0 32.0 41.0 17 37.68155958900632 39.0 37.0 41.0 32.0 41.0 18 37.65551958783616 39.0 37.0 41.0 32.0 41.0 19 37.68846216311366 39.0 37.0 41.0 32.0 41.0 20 37.59972938466282 39.0 37.0 41.0 32.0 41.0 21 37.518641287736266 39.0 36.0 41.0 32.0 41.0 22 37.412003780813684 39.0 36.0 41.0 32.0 41.0 23 37.18904034784562 39.0 36.0 41.0 31.0 41.0 24 37.04350894748859 39.0 36.0 41.0 31.0 41.0 25 36.92948365531111 39.0 36.0 40.0 30.0 41.0 26 37.08183861063503 39.0 36.0 41.0 31.0 41.0 27 36.99193265013721 39.0 36.0 41.0 31.0 41.0 28 36.91150629648049 39.0 36.0 41.0 30.0 41.0 29 36.829958879784314 39.0 35.0 41.0 30.0 41.0 30 36.65212748107491 39.0 35.0 40.0 30.0 41.0 31 36.48692266850664 39.0 35.0 40.0 30.0 41.0 32 36.34173827986427 38.0 35.0 40.0 30.0 41.0 33 36.148202247304354 38.0 35.0 40.0 30.0 41.0 34 36.01852948405881 38.0 35.0 40.0 29.0 41.0 35 35.81745199923469 38.0 35.0 40.0 28.0 41.0 36 35.73750850296389 38.0 35.0 40.0 27.0 41.0 37 35.59295155992189 38.0 34.0 40.0 27.0 41.0 38 35.491815130181514 38.0 34.0 40.0 26.0 41.0 39 35.39204421843849 38.0 34.0 40.0 25.0 41.0 40 35.21671385958736 38.0 34.0 40.0 25.0 41.0 41 35.07360616120644 38.0 34.0 40.0 24.0 41.0 42 34.88710115088856 38.0 34.0 40.0 24.0 41.0 43 34.574883749394324 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 9.0 13 7.0 14 7.0 15 23.0 16 38.0 17 94.0 18 247.0 19 522.0 20 1119.0 21 2153.0 22 3989.0 23 6844.0 24 11363.0 25 17346.0 26 24784.0 27 34997.0 28 47208.0 29 62722.0 30 79481.0 31 99236.0 32 122303.0 33 151518.0 34 186021.0 35 230555.0 36 296563.0 37 403941.0 38 554222.0 39 636647.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.62908650847371 22.489149999512435 13.533288746363018 23.348474745650837 2 18.081126093364308 22.563461616704714 35.90865118362266 23.446761106308315 3 19.478621623739098 25.4973582388214 31.930155149879134 23.09386498756037 4 13.431841620087406 15.842160780076956 35.55750357351453 35.168494026321106 5 11.656029345355003 40.19639787045098 34.670774316963595 13.476798467230427 6 32.16832220172208 36.76353740782922 15.325644602841393 15.74249578760731 7 25.81541868543758 34.380790884082955 21.214722577247937 18.58906785323153 8 27.718670339879818 34.555507247400186 19.792613425251087 17.93320898746891 9 25.66662732522227 14.015036501799113 22.35781010052916 37.960526072449454 10 16.237155606845143 28.008351146265102 33.522575768427515 22.23191747846224 11 32.70709823894917 21.977274095205622 24.083520877697538 21.232106788147668 12 19.912823394238597 27.158374196316498 31.52927591903463 21.39952649041027 13 30.780947846358547 20.966266224562983 27.71951096903358 20.533274960044896 14 20.924234766875042 22.197283557327378 27.531378164422353 29.347103511375227 15 23.36437944923995 29.11838513122053 25.54332384094893 21.973911578590588 16 22.491739137306013 28.633611110830902 25.893328195407943 22.981321556455143 17 20.33397860027176 27.30602230088269 27.30514804656278 25.05485105228276 18 21.37498011912051 26.799223796664585 30.439820535763225 21.38597554845168 19 20.9344231922186 25.270690993801875 31.33852035146369 22.456365462515844 20 24.56489875630598 24.60709833982467 30.255756376256194 20.572246527613157 21 23.806348633120184 25.42889740053928 29.196395516689343 21.56835844965119 22 22.579937948118385 24.88857460566927 30.22398059424411 22.30750685196823 23 21.672058462058878 26.45594447543564 31.043257767497444 20.82873929500804 24 20.907960186458272 25.582732535677145 29.6927365942347 23.81657068362989 25 21.81863056130826 26.51623439834322 30.431817746219437 21.23331729412908 26 22.884481077942127 25.77725412185693 29.348616643851994 21.989648156348952 27 21.794521317178457 26.942702380628138 29.04874741212315 22.214028890070253 28 21.653161118682377 26.261860016415806 29.364218720945757 22.720760143956063 29 20.788859847953724 26.201637343840524 30.42630321897078 22.58319958923497 30 20.385828606475602 26.3856678781814 31.678638907074504 21.549864608268496 31 21.396163973795236 25.982804762534034 30.785319117958093 21.83571214571264 32 22.35582621572629 25.95203773550646 29.29142023623024 22.40071581253701 33 23.101867777104154 25.82870062606697 29.02379753883959 22.04563405798929 34 21.766040801449112 27.971195337668963 29.060179968614268 21.202583892267658 35 20.78532920550794 28.51578852864007 29.417850860955568 21.28103140489643 36 21.351005375655312 25.623049109891415 31.05909522075426 21.966850293699014 37 21.525688113806392 25.807752147555302 30.470486687292343 22.196073051345966 38 21.49972948553832 25.320254488707494 31.35993958230146 21.820076443452727 39 22.305892843993018 25.009759704475137 31.242386001439833 21.441961450092016 40 21.096092991069494 25.429704404526888 30.532928620833548 22.94127398357007 41 21.612743668969657 25.22058949623785 30.503405724953538 22.66326110983896 42 19.88282974603248 26.513880636712695 30.8581176026736 22.745172014581215 43 20.39890879610809 26.216667793109732 30.43195224688404 22.95247116389814 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 208.0 1 320.0 2 432.0 3 834.0 4 1236.0 5 1236.0 6 2231.0 7 3226.0 8 3707.0 9 4188.0 10 6746.5 11 9305.0 12 9305.0 13 18229.5 14 27154.0 15 41982.5 16 56811.0 17 54704.5 18 52598.0 19 52598.0 20 58717.5 21 64837.0 22 54663.5 23 44490.0 24 50500.5 25 56511.0 26 56511.0 27 63211.5 28 69912.0 29 75519.5 30 81127.0 31 88295.5 32 95464.0 33 95464.0 34 105447.5 35 115431.0 36 125481.0 37 135531.0 38 141817.5 39 148104.0 40 148104.0 41 155769.5 42 163435.0 43 179855.0 44 196275.0 45 238632.5 46 280990.0 47 280990.0 48 282640.5 49 284291.0 50 261208.0 51 238125.0 52 226262.0 53 214399.0 54 214399.0 55 189479.0 56 164559.0 57 142701.5 58 120844.0 59 108422.5 60 96001.0 61 96001.0 62 85225.5 63 74450.0 64 65119.0 65 55788.0 66 47784.5 67 39781.0 68 39781.0 69 33944.5 70 28108.0 71 24278.5 72 20449.0 73 16603.5 74 12758.0 75 12758.0 76 9995.5 77 7233.0 78 5632.0 79 4031.0 80 3255.0 81 2479.0 82 2479.0 83 1939.0 84 1399.0 85 1085.5 86 772.0 87 643.0 88 514.0 89 514.0 90 479.0 91 444.0 92 286.5 93 129.0 94 110.0 95 91.0 96 91.0 97 58.0 98 25.0 99 26.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2973963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.10027616042369 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2054185641579 34.669905645679336 2 13.276585134220223 12.241084823098564 3 4.78452030341631 6.617031218479383 4 2.2000155622557274 4.056852999088753 5 1.2087462853001032 2.7861768780110516 6 0.7017692000455882 1.9411052353788742 7 0.46446501383694627 1.4988375783316763 8 0.3286486737190804 1.2120635694565272 9 0.24444293846552687 1.014199827185362 >10 1.37572432364968 11.880465259169922 >50 0.12210931337838855 3.8758303072535756 >100 0.07643756239839121 6.687041710378863 >500 0.005339145634209033 1.6601373389825764 >1k 0.004827172765140638 4.233102392430405 >5k 5.851118503200774E-4 1.9733370818847278 >10k+ 3.6569490645004833E-4 3.6528281351902705 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28618 0.9622850048907804 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28180 0.9475571821169262 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22712 0.7636947736068 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17086 0.5745195888449184 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11741 0.39479307577128564 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9072 0.3050475073159955 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8823 0.2966748409445578 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8044 0.2704808365134334 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7211 0.24247107311019 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6830 0.2296598848069058 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6586 0.22145534426621988 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5988 0.2013474949083092 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5972 0.20080949224990358 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4897 0.1646624386382749 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4600 0.1546757642916203 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3999 0.1344670394352586 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3838 0.1290533876850519 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3544 0.11916758883684835 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3340 0.11230805494217648 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3253 0.10938266548709584 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3004 0.10100999911565813 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 6.725033230070449E-5 0.0 0.0 0.0 0.0 7 6.725033230070449E-5 0.0 0.0 0.0 0.0 8 6.725033230070449E-5 0.0 0.0 0.0 0.0 9 6.725033230070449E-5 0.0 0.0 3.362516615035224E-5 0.0 10 6.725033230070449E-5 0.0 0.0 1.681258307517612E-4 0.0 11 6.725033230070449E-5 0.0 0.0 3.0262649535317017E-4 0.0 12 6.725033230070449E-5 0.0 0.0 5.380026584056359E-4 0.0 13 6.725033230070449E-5 0.0 0.0 7.061284891573971E-4 0.0 14 6.725033230070449E-5 0.0 0.0 8.40629153758806E-4 0.0 15 6.725033230070449E-5 0.0 0.0 0.0016476331413672598 0.0 16 6.725033230070449E-5 0.0 0.0 0.00255551262742677 0.0 17 6.725033230070449E-5 0.0 0.0 0.0037996437749898034 0.0 18 6.725033230070449E-5 0.0 0.0 0.004304021267245087 0.0 19 1.0087549845105673E-4 0.0 0.0 0.004976524590252131 0.0 20 1.0087549845105673E-4 0.0 0.0 0.007027659725423618 0.0 21 1.0087549845105673E-4 0.0 0.0 0.009684047851301445 0.0 22 1.0087549845105673E-4 0.0 0.0 0.017585961896634222 0.0 23 1.0087549845105673E-4 0.0 0.0 0.027135509083334258 0.0 24 1.0087549845105673E-4 0.0 0.0 0.04142620469723396 0.0 25 1.0087549845105673E-4 0.0 0.0 0.0472433584412449 0.0 26 1.0087549845105673E-4 0.0 0.0 0.053934766505164995 0.0 27 1.0087549845105673E-4 0.0 0.0 0.09690772884531516 0.0 28 1.0087549845105673E-4 0.0 0.0 0.17125297120374397 0.0 29 1.0087549845105673E-4 0.0 0.0 0.25941815684996755 0.0 30 1.0087549845105673E-4 0.0 0.0 0.42034820204555334 0.0 31 1.0087549845105673E-4 0.0 0.0 0.632422124955825 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6535 0.0 29.38485 1 TAGACCG 50 0.007037443 18.5 5 GTCGTAC 50 0.007037443 18.5 1 ATACGTA 50 0.007037443 18.5 6 GTATCAA 10850 0.0 17.732718 2 GTATTGG 1185 0.0 17.641352 1 TAGGCCG 75 2.0686576E-4 17.266666 5 ATTGGAC 1150 0.0 17.213043 3 ACGAACG 125 1.6601916E-7 16.279999 15 CGAATTA 160 6.311893E-10 16.1875 15 GGACCCT 1625 0.0 15.483077 6 TTGGACC 1755 0.0 14.968661 4 TTGCGCG 75 0.0041064443 14.8 18 TTAGTAC 100 1.0942907E-4 14.8 3 TGGACCC 1745 0.0 14.73639 5 GTATTAG 505 0.0 14.653466 1 TATTGGA 1535 0.0 14.583061 2 ACGGACC 280 0.0 14.535714 8 TCCGATA 145 8.922889E-7 14.034483 8 TAACGAA 145 8.922889E-7 14.034483 13 >>END_MODULE