##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088122_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 547696 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.661542169378635 31.0 31.0 34.0 30.0 34.0 2 31.834094095994857 31.0 31.0 34.0 30.0 34.0 3 31.93032083491572 31.0 31.0 34.0 30.0 34.0 4 35.62984210218808 37.0 35.0 37.0 33.0 37.0 5 35.54175491513541 37.0 35.0 37.0 33.0 37.0 6 35.56299845169583 37.0 35.0 37.0 33.0 37.0 7 35.4201290496918 37.0 35.0 37.0 33.0 37.0 8 35.47897008559493 37.0 35.0 37.0 33.0 37.0 9 36.99048012035874 39.0 37.0 39.0 33.0 39.0 10 36.86899119219421 39.0 37.0 39.0 33.0 39.0 11 36.93693034091905 39.0 37.0 39.0 33.0 39.0 12 36.83021420642108 39.0 37.0 39.0 32.0 39.0 13 36.82289810405773 39.0 37.0 39.0 32.0 39.0 14 37.82714315970904 40.0 37.0 41.0 32.0 41.0 15 37.83502526949257 40.0 37.0 41.0 32.0 41.0 16 37.72541884549093 40.0 37.0 41.0 32.0 41.0 17 37.7624430340919 39.0 37.0 41.0 32.0 41.0 18 37.75271318395606 39.0 37.0 41.0 32.0 41.0 19 37.80294908124215 40.0 37.0 41.0 32.0 41.0 20 37.710405042213196 39.0 37.0 41.0 32.0 41.0 21 37.63303730536648 39.0 37.0 41.0 32.0 41.0 22 37.5483242528702 39.0 36.0 41.0 32.0 41.0 23 37.31262415646636 39.0 36.0 41.0 31.0 41.0 24 37.16222320411323 39.0 36.0 41.0 31.0 41.0 25 37.0429983056294 39.0 36.0 41.0 31.0 41.0 26 37.18833988197832 39.0 36.0 41.0 31.0 41.0 27 37.1070520872893 39.0 36.0 41.0 31.0 41.0 28 37.0230529344746 39.0 36.0 41.0 31.0 41.0 29 36.929097528555985 39.0 35.0 41.0 31.0 41.0 30 36.73133453594695 39.0 35.0 40.0 30.0 41.0 31 36.531057374894104 39.0 35.0 40.0 30.0 41.0 32 36.36754878618796 38.0 35.0 40.0 30.0 41.0 33 36.1655279571149 38.0 35.0 40.0 30.0 41.0 34 36.0181998773042 38.0 35.0 40.0 30.0 41.0 35 35.80479499576408 38.0 35.0 40.0 28.0 41.0 36 35.70845688118956 38.0 35.0 40.0 27.0 41.0 37 35.526788583447754 38.0 34.0 40.0 27.0 41.0 38 35.395319666384275 38.0 34.0 40.0 26.0 41.0 39 35.26823091642079 38.0 34.0 40.0 25.0 41.0 40 35.051008223540066 38.0 34.0 40.0 24.0 41.0 41 34.88079883731121 38.0 34.0 40.0 24.0 41.0 42 34.642560836668515 38.0 33.0 40.0 23.0 41.0 43 34.317464432824046 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 1.0 15 2.0 16 5.0 17 12.0 18 38.0 19 74.0 20 185.0 21 355.0 22 659.0 23 1146.0 24 1903.0 25 2994.0 26 4340.0 27 6165.0 28 8522.0 29 11303.0 30 14186.0 31 17924.0 32 22478.0 33 27853.0 34 34762.0 35 42990.0 36 55412.0 37 77715.0 38 101376.0 39 115294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.66672022435804 22.825801174374106 13.971984458531741 22.535494142736116 2 17.91322193333528 22.66092869036838 36.275232975957465 23.150616400338876 3 19.748729222050187 25.67172299962023 32.25329379801934 22.326253980310245 4 13.114209342408929 15.562647892261399 35.0506485349537 36.272494230375976 5 11.055220414244399 41.068950658759604 34.273940288043 13.601888638952996 6 31.87680757208378 36.208407583769095 15.249700563816424 16.665084280330696 7 25.121600303818177 35.20803511437002 20.840575793871054 18.829788787940753 8 28.307674330285415 33.86112003739301 19.632423826356227 18.198781805965353 9 25.621512663959567 13.788853670649411 23.192062750138764 37.39757091525225 10 16.670561771493674 28.148096754403902 32.777489702316615 22.403851771785806 11 31.778943063305192 21.76061172621308 24.63903333235956 21.82141187812217 12 19.9566913032047 27.66881627764307 31.471290642984428 20.9032017761678 13 31.352246501708976 21.042512634746284 28.244135432794838 19.361105430749905 14 20.710028921153338 22.556308609155444 27.87276153194473 28.860900937746486 15 23.262357220063684 28.981040577254536 26.408628144079927 21.347974058601853 16 22.011298238438844 28.622447489118052 26.436380765972363 22.929873506470745 17 19.606314451812683 27.168173585346615 27.490067482691128 25.73544448014957 18 20.664200578423067 26.711168239315242 31.67450556513102 20.95012561713067 19 20.138726592854432 24.803905816365283 32.88265753264585 22.17471005813444 20 24.843708918816276 23.858125675557243 31.414872484005723 19.883292921620754 21 23.712424410621953 24.995252840992084 30.23538605357717 21.056936694808797 22 22.207940171189858 24.335397738891647 31.460883409774766 21.99577868014373 23 21.112441938593673 26.476001285384594 32.30350413368 20.108052642341736 24 19.964724956910405 25.595038123338494 30.678697671701087 23.761539248050013 25 21.06387485028191 26.57879553620987 31.79902719756946 20.55830241593877 26 22.700184043703075 25.448789109286903 30.275371739066927 21.575655107943092 27 21.195152055154683 27.114859338026935 29.846849347083054 21.843139259735327 28 20.92858081855628 26.314780462154186 30.30604568957962 22.45059302970991 29 19.944275656568607 26.259457801408082 31.37981654056265 22.416450001460664 30 19.264519003242675 26.39365633490111 33.34459262072391 20.997232041132307 31 20.743441617247523 26.00950162133738 32.12092109491397 21.126135666501124 32 22.084331453945254 26.076327013525752 30.02048581694955 21.818855715579446 33 22.940098156641643 25.956187374017702 29.64911191609944 21.454602553241216 34 21.063509684204377 28.75865443603751 29.722145131605853 20.45569074815226 35 19.691945896993953 29.57553095147673 30.019207735678187 20.71331541585113 36 20.60613917209547 25.660585434255502 32.437154918056734 21.2961204755923 37 20.726278811603517 26.10316672022436 31.490279279016097 21.680275189156028 38 20.912513511144866 25.52364815518098 32.43587683678537 21.127961496888787 39 21.939543104203793 25.165785399199557 32.241060734422014 20.653610762174637 40 20.260509479711374 25.842072974788934 31.31591247699454 22.581505068505155 41 21.22107884665946 25.321163565189448 31.129677777453185 22.328079810697908 42 18.70891881627764 27.22641757471298 31.623199731237765 22.44146387777161 43 19.58805614793608 26.848653267506062 31.114523385235604 22.44876719932225 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 35.0 1 62.0 2 89.0 3 186.0 4 283.0 5 283.0 6 536.0 7 789.0 8 869.0 9 949.0 10 1566.5 11 2184.0 12 2184.0 13 4275.5 14 6367.0 15 10183.0 16 13999.0 17 12980.5 18 11962.0 19 11962.0 20 12961.5 21 13961.0 22 11067.0 23 8173.0 24 9434.0 25 10695.0 26 10695.0 27 11584.0 28 12473.0 29 13013.5 30 13554.0 31 14714.0 32 15874.0 33 15874.0 34 17605.5 35 19337.0 36 21211.5 37 23086.0 38 24267.0 39 25448.0 40 25448.0 41 27014.0 42 28580.0 43 32647.5 44 36715.0 45 46520.5 46 56326.0 47 56326.0 48 57001.0 49 57676.0 50 51912.0 51 46148.0 52 43404.5 53 40661.0 54 40661.0 55 35445.0 56 30229.0 57 25015.5 58 19802.0 59 17413.0 60 15024.0 61 15024.0 62 13243.5 63 11463.0 64 10082.5 65 8702.0 66 7404.0 67 6106.0 68 6106.0 69 5268.5 70 4431.0 71 3572.5 72 2714.0 73 2204.0 74 1694.0 75 1694.0 76 1307.0 77 920.0 78 727.5 79 535.0 80 414.5 81 294.0 82 294.0 83 241.5 84 189.0 85 143.5 86 98.0 87 72.0 88 46.0 89 46.0 90 50.0 91 54.0 92 36.0 93 18.0 94 14.5 95 11.0 96 11.0 97 5.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 547696.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.46946628859915 #Duplication Level Percentage of deduplicated Percentage of total 1 84.86298603307925 48.77030514977908 2 8.976861314287305 10.317908573577283 3 2.427144900499556 4.184601661104137 4 1.0432113869771227 2.3981120654305808 5 0.5902995667650001 1.6962100526187924 6 0.3873368401370717 1.3356024885953974 7 0.26913559915468227 1.0826955469877362 8 0.19955051700704532 0.9174449368007136 9 0.1493323510257354 0.7723845461763678 >10 0.9729729543799868 10.218612475224447 >50 0.06710383572801701 2.685787468293354 >100 0.04388781607278107 5.5530642880819725 >500 0.005088442443220991 2.0376892916376224 >1k 0.004134359485117055 4.510185545765685 >5k 9.540829581039357E-4 3.5193959099268155 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6994 1.2769857731296193 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6785 1.238825918027519 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5477 1.0000073033215506 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3992 0.7288714907539949 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2870 0.5240133212585083 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2103 0.38397213052496276 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2090 0.3815985510210044 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1931 0.35256784785720546 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1925 0.35147234962460927 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1659 0.30290526131284506 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1604 0.2928631941807134 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1533 0.2798997984283252 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1471 0.2685796500248313 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1292 0.23589728608571178 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1205 0.2200125617130671 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1002 0.18294820484356283 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 996 0.18185270661096667 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 895 0.16341181969559757 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 827 0.15099617305950747 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 812 0.14825742747801698 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 725 0.13237270310537233 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 724 0.1321901200666063 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 698 0.1274429610586895 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 685 0.12506938155473107 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 669 0.1221480529344746 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 669 0.1221480529344746 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 650 0.11867897519792002 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 617 0.112653734918641 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 589 0.10754140983319214 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 564 0.10297683386404136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 3.651660775320616E-4 0.0 11 0.0 0.0 0.0 5.477491162980924E-4 0.0 12 0.0 0.0 0.0 5.477491162980924E-4 0.0 13 0.0 0.0 0.0 7.303321550641232E-4 0.0 14 0.0 0.0 0.0 7.303321550641232E-4 0.0 15 0.0 0.0 0.0 0.0016432473488942772 0.0 16 0.0 0.0 0.0 0.002738745581490462 0.0 17 0.0 0.0 0.0 0.005112325085448862 0.0 18 0.0 0.0 0.0 0.006390406356811078 0.0 19 0.0 0.0 0.0 0.006755572434343139 0.0 20 0.0 0.0 0.0 0.009859484093365662 0.0 21 0.0 0.0 0.0 0.014424060062516432 0.0 22 0.0 0.0 0.0 0.026291957582308435 0.0 23 0.0 0.0 0.0 0.03870760421839853 0.0 24 0.0 0.0 0.0 0.0598872367152581 0.0 25 0.0 0.0 0.0 0.0688338056147936 0.0 26 0.0 0.0 0.0 0.07869328970815927 0.0 27 0.0 0.0 0.0 0.12890362536881775 0.0 28 0.0 0.0 0.0 0.19956326137127164 0.0 29 0.0 0.0 0.0 0.2857424556688382 0.0 30 0.0 0.0 0.0 0.47088165697759343 0.0 31 0.0 0.0 0.0 0.6848689784113815 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGCGT 25 0.0054938616 29.6 6 GGTATCA 1540 0.0 27.870129 1 AAAGCCG 35 8.8634435E-4 26.42857 19 GTATTGG 225 0.0 25.48889 1 ATTGGAC 240 0.0 24.666666 3 ACCGACC 40 0.0019299029 23.125002 8 CTGACCT 50 2.699599E-4 22.2 4 GTACTAG 60 3.7217033E-5 21.583332 1 GTATACG 60 3.7217033E-5 21.583332 1 TTGGACC 325 0.0 21.061539 4 TACTAGG 45 0.0038232892 20.555555 2 TATAGGT 100 1.2860255E-8 20.35 4 ATAGCAC 65 6.8937E-5 19.923077 3 TAGGCAT 65 6.8937E-5 19.923077 5 TATTGGA 300 0.0 19.733332 2 GGACCTT 75 9.251256E-6 19.733332 6 CTTCTAT 110 3.8406142E-8 18.5 1 ATACGGG 50 0.0070302933 18.5 3 GACCTTC 50 0.0070302933 18.5 7 GGTTATC 50 0.0070302933 18.5 2 >>END_MODULE