##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088121_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 677677 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.66315663656875 31.0 31.0 34.0 30.0 34.0 2 31.847195640400958 31.0 31.0 34.0 30.0 34.0 3 31.950346551528234 31.0 31.0 34.0 30.0 34.0 4 35.64453862238205 37.0 35.0 37.0 33.0 37.0 5 35.5479572126544 37.0 35.0 37.0 33.0 37.0 6 35.56185321325646 37.0 35.0 37.0 33.0 37.0 7 35.429555673277974 37.0 35.0 37.0 33.0 37.0 8 35.477225876044194 37.0 35.0 37.0 33.0 37.0 9 36.99419192329089 39.0 37.0 39.0 33.0 39.0 10 36.867234685550784 39.0 37.0 39.0 33.0 39.0 11 36.922522086480726 39.0 37.0 39.0 33.0 39.0 12 36.8100097834219 39.0 37.0 39.0 32.0 39.0 13 36.82366673208623 39.0 37.0 39.0 32.0 39.0 14 37.84926152134424 40.0 37.0 41.0 32.0 41.0 15 37.85389057028643 40.0 37.0 41.0 32.0 41.0 16 37.742859798989784 40.0 37.0 41.0 32.0 41.0 17 37.752286118608126 40.0 37.0 41.0 32.0 41.0 18 37.74067881896538 39.0 37.0 41.0 32.0 41.0 19 37.793234830162454 40.0 37.0 41.0 32.0 41.0 20 37.69367117373026 39.0 37.0 41.0 32.0 41.0 21 37.61374076440546 39.0 37.0 41.0 32.0 41.0 22 37.522384557835075 39.0 36.0 41.0 32.0 41.0 23 37.28223327632486 39.0 36.0 41.0 31.0 41.0 24 37.154685786886674 39.0 36.0 41.0 31.0 41.0 25 37.042326949269345 39.0 36.0 41.0 31.0 41.0 26 37.194942428325 39.0 36.0 41.0 31.0 41.0 27 37.110979124273065 39.0 36.0 41.0 31.0 41.0 28 37.048866938084075 39.0 36.0 41.0 31.0 41.0 29 36.961834325202126 39.0 36.0 41.0 31.0 41.0 30 36.77562614637947 39.0 35.0 41.0 30.0 41.0 31 36.602134940391956 39.0 35.0 40.0 30.0 41.0 32 36.44953864451649 38.0 35.0 40.0 30.0 41.0 33 36.244290421543006 38.0 35.0 40.0 30.0 41.0 34 36.12043348084707 38.0 35.0 40.0 30.0 41.0 35 35.9070014180797 38.0 35.0 40.0 29.0 41.0 36 35.82180891486652 38.0 35.0 40.0 28.0 41.0 37 35.667471376481714 38.0 35.0 40.0 27.0 41.0 38 35.56096045756312 38.0 35.0 40.0 27.0 41.0 39 35.46042288582909 38.0 34.0 40.0 26.0 41.0 40 35.26714496729268 38.0 34.0 40.0 25.0 41.0 41 35.12094257293666 38.0 34.0 40.0 24.0 41.0 42 34.90931225347769 38.0 34.0 40.0 24.0 41.0 43 34.597696247622395 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 2.0 15 5.0 16 9.0 17 25.0 18 40.0 19 103.0 20 227.0 21 391.0 22 759.0 23 1376.0 24 2282.0 25 3681.0 26 5291.0 27 7531.0 28 10228.0 29 13593.0 30 17359.0 31 21589.0 32 27407.0 33 34284.0 34 42178.0 35 52073.0 36 68250.0 37 94811.0 38 127297.0 39 146885.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.666866368491185 22.69665342043481 13.686608812162726 22.94987139891128 2 17.821174394291088 22.67865074364336 36.28882196090468 23.21135290116088 3 19.4123454093912 25.886521159785563 32.08165541991244 22.619478010910804 4 13.102259631063177 15.684020558466644 35.90073146941685 35.312988341053334 5 11.284136838051166 40.60341431094754 34.82042329900528 13.292025551996009 6 31.681612331538478 36.898256839172646 15.42726106980169 15.992869759487188 7 25.459178930375387 34.64836492901486 21.343796528434638 18.548659612175122 8 27.803953800999594 34.23651680667929 19.992120139830625 17.967409252490494 9 25.56689986527505 13.989703059126986 22.86487515438771 37.57852192121025 10 16.333002300505996 27.87286568675047 33.56436768549029 22.22976432725325 11 32.097592215760606 22.107287099901576 24.487624635335123 21.307496049002697 12 19.8060432920108 27.441834384227292 31.778266047099134 20.973856276662776 13 30.874295571489075 21.13130591712571 28.003163749101713 19.991234762283508 14 20.708833264224698 22.542745290160358 27.86961930241103 28.878802143203913 15 23.139194631070552 29.30156992195397 25.98538831921402 21.573847127761457 16 22.17974049584094 28.77108120830425 26.220456057974523 22.82872223788029 17 19.74982181776864 27.394466685456347 27.446703960736457 25.40900753603855 18 20.880596508366082 27.047841375758658 31.10493642251397 20.96662569336129 19 20.390097347261303 25.221012370199965 32.04225611906557 22.34663416347316 20 24.586934483537142 24.54709249391672 30.800661672153545 20.06531135039259 21 23.68709576981364 25.364148406984448 29.687004280800437 21.26175154240147 22 22.157015805464845 24.849596489182897 30.78944688989002 22.203940815462232 23 21.338189137302873 26.718185802380777 31.71658474464974 20.22704031566661 24 20.287541114719847 25.733941095831792 30.16894479228305 23.809572997165315 25 21.32048158636046 26.75478140766176 31.162190837227765 20.76254616875001 26 22.673338478360634 25.8111165053558 29.885623977204478 21.62992103907909 27 21.227074255139247 27.274645590746033 29.526898507696142 21.971381646418575 28 21.31457906937966 26.409631727209277 29.711204600421738 22.564584602989328 29 20.335351502264352 26.37141292975857 30.885215227903558 22.408020340073513 30 19.69669916494141 26.729253021719785 32.3950790715931 21.1789687417457 31 21.122747267503545 26.19478010910803 31.459530130135743 21.222942493252685 32 21.9421641873636 26.257789477878102 29.670624796178714 22.12942153857959 33 22.83078811882357 26.248345450708822 29.42419471223016 21.49667171823745 34 21.23046820240321 28.5239133097331 29.44175470024805 20.803863787615633 35 20.02915843388517 29.40368346572187 29.792364208907784 20.774793891485178 36 20.96116586515405 25.993799405911666 31.653870501728697 21.391164227205586 37 20.973856276662776 26.40063038881355 30.908530169977734 21.71698316454594 38 21.028159432886167 25.91824718855738 31.78416856407994 21.269424814476512 39 22.0134370799068 25.42804315330165 31.70064794880157 20.857871817989988 40 20.543415225837677 25.890210232898564 30.891265307808887 22.675109233454876 41 21.473799464936835 25.595822198480988 30.79047983036166 22.139898506220515 42 19.211954957892917 27.14538046886644 31.091065507609084 22.55159906563156 43 19.901516504175294 26.91754331340742 30.62860330216313 22.552336880254163 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 30.0 1 58.5 2 87.0 3 190.5 4 294.0 5 294.0 6 571.0 7 848.0 8 981.0 9 1114.0 10 1721.5 11 2329.0 12 2329.0 13 4551.5 14 6774.0 15 10518.0 16 14262.0 17 13765.5 18 13269.0 19 13269.0 20 14478.0 21 15687.0 22 13187.0 23 10687.0 24 12012.5 25 13338.0 26 13338.0 27 14874.5 28 16411.0 29 17610.5 30 18810.0 31 20342.5 32 21875.0 33 21875.0 34 24028.0 35 26181.0 36 28771.5 37 31362.0 38 32417.0 39 33472.0 40 33472.0 41 35410.0 42 37348.0 43 41573.0 44 45798.0 45 55985.5 46 66173.0 47 66173.0 48 66748.5 49 67324.0 50 61471.5 51 55619.0 52 52346.5 53 49074.0 54 49074.0 55 43146.5 56 37219.0 57 31273.0 58 25327.0 59 22460.0 60 19593.0 61 19593.0 62 17319.5 63 15046.0 64 13060.5 65 11075.0 66 9379.5 67 7684.0 68 7684.0 69 6448.0 70 5212.0 71 4305.0 72 3398.0 73 2727.5 74 2057.0 75 2057.0 76 1608.0 77 1159.0 78 951.0 79 743.0 80 576.0 81 409.0 82 409.0 83 331.5 84 254.0 85 190.5 86 127.0 87 111.5 88 96.0 89 96.0 90 81.0 91 66.0 92 45.0 93 24.0 94 20.0 95 16.0 96 16.0 97 9.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 677677.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.86533386689554 #Duplication Level Percentage of deduplicated Percentage of total 1 84.77862929440823 49.90522318193111 2 9.236117088762025 10.87374232127432 3 2.4397327100705084 4.308470415728589 4 0.9788332546550096 2.3047738534114846 5 0.5385448009926338 1.5850809756356103 6 0.3579887199302222 1.2643875311565054 7 0.24501506971496662 1.0096025716834536 8 0.1976134318883175 0.9306064515751066 9 0.15231422450601106 0.8069424910401259 >10 0.9592902509809302 10.44133930049018 >50 0.06915039733639093 2.8132751224776458 >100 0.037969807903100325 4.790970668819666 >500 0.00427474658510376 1.7660293215188152 >1k 0.003771835222150376 4.267423127934578 >5k 7.543670444300752E-4 2.9321326653227904 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7062 1.042089372960865 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6961 1.0271855175843358 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5786 0.8537990812732319 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4556 0.6722966841135232 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2982 0.4400326409189038 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2400 0.3541510188482123 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2288 0.3376239713019624 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2155 0.3179981023407907 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1997 0.2946831602666167 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1803 0.2660559529097195 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1788 0.2638425090419182 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1584 0.23373967243982013 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1528 0.22547614866669521 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1321 0.1949306232910369 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1235 0.18224021178230929 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1150 0.16969736319810175 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1038 0.15317031565185182 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1005 0.1483007391426889 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 923 0.13620057933204166 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 821 0.12114916103099264 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 810 0.11952596886127168 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 793 0.11701739914443017 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 776 0.11450882942758867 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 756 0.11155757093718689 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 735 0.10845874952226503 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 714 0.10535992810734318 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 709 0.10462211348474272 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 698 0.10299892131502175 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.4756292452008848E-4 0.0 11 0.0 0.0 0.0 2.9512584904017695E-4 0.0 12 0.0 0.0 0.0 5.902516980803539E-4 0.0 13 0.0 0.0 0.0 7.378146226004424E-4 0.0 14 0.0 0.0 0.0 7.378146226004424E-4 0.0 15 0.0 0.0 0.0 0.0011805033961607078 0.0 16 0.0 0.0 0.0 0.002803695565881681 0.0 17 0.0 0.0 0.0 0.005164702358203097 0.0 18 0.0 0.0 0.0 0.005754954056283451 0.0 19 0.0 0.0 0.0 0.0069354574524441584 0.0 20 0.0 0.0 0.0 0.00973915301832584 0.0 21 0.0 0.0 0.0 0.01372335198036823 0.0 22 0.0 0.0 0.0 0.022134438678013273 0.0 23 0.0 0.0 0.0 0.03393947263962035 0.0 24 0.0 0.0 0.0 0.050909208959430526 0.0 25 0.0 0.0 0.0 0.05813979226091486 0.0 26 0.0 0.0 0.0 0.06581306433595946 0.0 27 0.0 0.0 0.0 0.10270379546598159 0.0 28 0.0 0.0 0.0 0.1719108070659031 0.0 29 0.0 0.0 0.0 0.25705461451399414 0.0 30 0.0 0.0 0.0 0.41583232129760933 0.0 31 0.0 0.0 0.0 0.6082543748718047 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1655 0.0 29.398792 1 GATTCGC 35 8.8656234E-4 26.42857 10 TCTAAGC 65 9.379983E-8 25.615385 3 GTATTGG 305 0.0 24.262295 1 TAACGCT 55 1.9011646E-5 23.545454 32 TTACGTT 55 1.9011646E-5 23.545454 18 CTGTGCG 50 2.7005165E-4 22.2 9 ATTGGAC 320 0.0 20.8125 3 TGCGACG 45 0.0038242121 20.555555 22 CAATGCG 45 0.0038242121 20.555555 19 CTTAACG 65 6.896789E-5 19.923077 30 ATTACGT 65 6.896789E-5 19.923077 17 GTACTAG 65 6.896789E-5 19.923077 1 TATTGGA 390 0.0 18.97436 2 TGGACCC 440 0.0 18.920454 5 TTGGACC 450 0.0 18.911112 4 CCGTGCT 50 0.007031975 18.5 9 CGCGCGC 60 9.2314853E-4 18.5 22 GTCTATG 60 9.2314853E-4 18.5 1 CGATTCG 50 0.007031975 18.5 9 >>END_MODULE