##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088119_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2839313 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60571694631765 31.0 31.0 34.0 30.0 34.0 2 31.792362096042247 31.0 31.0 34.0 30.0 34.0 3 31.89088064612813 31.0 31.0 34.0 30.0 34.0 4 35.599865178654134 37.0 35.0 37.0 33.0 37.0 5 35.48045143314597 37.0 35.0 37.0 33.0 37.0 6 35.488444211680786 37.0 35.0 37.0 33.0 37.0 7 35.372437276200266 37.0 35.0 37.0 33.0 37.0 8 35.40247059764105 37.0 35.0 37.0 33.0 37.0 9 36.93389316359274 39.0 37.0 39.0 33.0 39.0 10 36.77915925436893 39.0 37.0 39.0 32.0 39.0 11 36.83903218842023 39.0 37.0 39.0 32.0 39.0 12 36.73304880441149 39.0 35.0 39.0 32.0 39.0 13 36.74329846691788 39.0 35.0 39.0 32.0 39.0 14 37.78214060936572 40.0 37.0 41.0 32.0 41.0 15 37.790967744662176 40.0 37.0 41.0 32.0 41.0 16 37.676856338135316 39.0 37.0 41.0 32.0 41.0 17 37.66204958734736 39.0 37.0 41.0 32.0 41.0 18 37.63748026371168 39.0 37.0 41.0 32.0 41.0 19 37.66649045033077 39.0 37.0 41.0 32.0 41.0 20 37.572785388578154 39.0 36.0 41.0 32.0 41.0 21 37.487571817548826 39.0 36.0 41.0 32.0 41.0 22 37.37854720490485 39.0 36.0 41.0 32.0 41.0 23 37.17241706004234 39.0 36.0 41.0 31.0 41.0 24 37.02421712576246 39.0 36.0 41.0 31.0 41.0 25 36.917718124067335 39.0 36.0 40.0 30.0 41.0 26 37.06959077776913 39.0 36.0 41.0 31.0 41.0 27 36.977325148724354 39.0 36.0 41.0 31.0 41.0 28 36.89951055061559 39.0 36.0 41.0 30.0 41.0 29 36.83541265087717 39.0 35.0 41.0 30.0 41.0 30 36.652931536607625 39.0 35.0 40.0 30.0 41.0 31 36.5009606196992 39.0 35.0 40.0 30.0 41.0 32 36.35362744438532 38.0 35.0 40.0 30.0 41.0 33 36.160202133403395 38.0 35.0 40.0 30.0 41.0 34 36.0465239302606 38.0 35.0 40.0 29.0 41.0 35 35.855508357127235 38.0 35.0 40.0 28.0 41.0 36 35.773585723025256 38.0 35.0 40.0 27.0 41.0 37 35.63037361502589 38.0 35.0 40.0 27.0 41.0 38 35.531070368078474 38.0 34.0 40.0 26.0 41.0 39 35.44084255592814 38.0 34.0 40.0 26.0 41.0 40 35.274591424052225 38.0 34.0 40.0 25.0 41.0 41 35.13946542702407 38.0 34.0 40.0 24.0 41.0 42 34.97168716516988 38.0 34.0 40.0 24.0 41.0 43 34.6559984756876 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 7.0 14 8.0 15 14.0 16 58.0 17 116.0 18 228.0 19 500.0 20 1113.0 21 2180.0 22 3926.0 23 6554.0 24 10565.0 25 15967.0 26 23478.0 27 33036.0 28 44864.0 29 59234.0 30 75815.0 31 94356.0 32 116857.0 33 144941.0 34 178485.0 35 220254.0 36 282825.0 37 385331.0 38 536188.0 39 602407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.54072235079401 22.35223802377547 13.467412715681576 23.63962690974894 2 18.27177912403458 22.490440469226183 35.617031302994775 23.620749103744462 3 19.61721021951437 25.366347422774453 31.460779420937392 23.555662936773793 4 13.75283387213738 15.974674155332647 35.36781608790577 34.904675884624204 5 12.052739518327146 39.85196418992904 34.52063932366738 13.574656968076432 6 32.49817825650078 36.66393948113505 15.263234451432442 15.57464781093173 7 26.157912142831734 33.80448016826605 21.40884080057394 18.62876688832827 8 27.459212844797314 34.64517649163724 19.798521684646957 18.097088978918492 9 25.746862004999098 14.126304496897665 22.07872115543443 38.0481123426688 10 16.438870952233867 27.827823138907192 33.5451568742157 22.18814903464324 11 33.02182605440119 22.079848188628727 23.65808207830556 21.240243678664523 12 20.105426911369054 27.09222266090424 31.324126646128835 21.478223781597872 13 30.666221018957756 20.95175840071172 27.22383900612578 21.158181574204747 14 21.054670619266 22.232772505179952 27.345417711960607 29.367139163593446 15 23.627229544611673 29.037904591709335 25.107129788086063 22.227736075592933 16 22.70714782061717 28.238028001844107 25.79278860766671 23.26203556987201 17 20.668450431495224 27.257438683230767 27.258354397701133 24.815756487572873 18 21.592335892520477 26.650813066400218 30.01669770116926 21.740153339910044 19 21.345233864670785 25.40184896839482 30.804564343557754 22.44835282337664 20 24.50124378678927 24.723868062450318 29.863526846106787 20.911361304653624 21 23.83213826724986 25.401038913286417 28.8576497201964 21.909173099267324 22 22.771071734606224 25.045636039422213 29.760579407765185 22.422712818206374 23 22.00440740418545 26.38416405658693 30.386822446133976 21.224606093093644 24 21.317691990985143 25.766092008876797 29.28521793828296 23.630998061855106 25 22.09189335589278 26.41265686453026 29.9294935077605 21.565956271816457 26 23.01486310244767 25.797543278955153 28.988103812436318 22.19948980616086 27 22.019833671032394 26.836245246649455 28.69669529213581 22.447225790182344 28 21.956367614278523 26.244235841557444 29.030156238498538 22.769240305665488 29 21.207207518156682 26.17710692692211 29.92491493540867 22.690770619512538 30 20.83025013445154 26.42963280201936 30.88972578930185 21.850391274227253 31 21.782417084696192 25.98043963451722 30.211709663570023 22.025433617216557 32 22.49568821753713 26.04939997809329 28.920481820778477 22.5344299835911 33 23.054238824673433 25.91813583074497 28.780694484898284 22.24693085968331 34 22.005287898868495 27.511408569608207 28.95182743149487 21.53147610002842 35 21.179982622556935 28.02818850898087 29.10302597846733 21.688802889994868 36 21.555143797108666 25.66553951607308 30.529039947339378 22.25027673947888 37 21.723388721144868 25.744150081375317 30.110206236508617 22.42225496097119 38 21.74082251586916 25.372123467895225 30.751171145977917 22.1358828702577 39 22.375588742769818 25.0587025805186 30.820659786363812 21.74504889034777 40 21.315931001619052 25.379871821106022 30.277112808626594 23.02708436864833 41 21.702362508113758 25.205780412374402 30.217837906564014 22.874019172947822 42 20.26145056920459 26.30446167787771 30.44570993053601 22.988377822381683 43 20.599630967068443 26.021611565896396 30.155498883004444 23.223258584030717 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 206.0 1 319.0 2 432.0 3 816.0 4 1200.0 5 1200.0 6 2139.5 7 3079.0 8 3468.0 9 3857.0 10 6200.0 11 8543.0 12 8543.0 13 16708.0 14 24873.0 15 37787.5 16 50702.0 17 48436.0 18 46170.0 19 46170.0 20 51963.5 21 57757.0 22 49668.0 23 41579.0 24 47544.5 25 53510.0 26 53510.0 27 59947.5 28 66385.0 29 72155.5 30 77926.0 31 85635.5 32 93345.0 33 93345.0 34 102425.0 35 111505.0 36 121160.0 37 130815.0 38 137011.5 39 143208.0 40 143208.0 41 149414.5 42 155621.0 43 169528.5 44 183436.0 45 217694.5 46 251953.0 47 251953.0 48 255111.0 49 258269.0 50 240004.0 51 221739.0 52 210213.5 53 198688.0 54 198688.0 55 180850.5 56 163013.0 57 143716.0 58 124419.0 59 114128.0 60 103837.0 61 103837.0 62 91837.0 63 79837.0 64 69555.0 65 59273.0 66 50773.5 67 42274.0 68 42274.0 69 36357.0 70 30440.0 71 25626.0 72 20812.0 73 16878.5 74 12945.0 75 12945.0 76 10100.5 77 7256.0 78 5765.5 79 4275.0 80 3503.0 81 2731.0 82 2731.0 83 2073.0 84 1415.0 85 1090.0 86 765.0 87 645.0 88 525.0 89 525.0 90 487.0 91 449.0 92 291.5 93 134.0 94 103.0 95 72.0 96 72.0 97 49.0 98 26.0 99 21.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2839313.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.62772831971315 #Duplication Level Percentage of deduplicated Percentage of total 1 75.78202739321583 37.60889866987574 2 13.24607732894857 13.147454539659423 3 4.838815996721183 7.204183370230825 4 2.0930796673408367 4.154991563292265 5 1.1398206028740892 2.828335360632347 6 0.652976851009093 1.9443454656564645 7 0.4147880578275229 1.4409492330888043 8 0.29762892270357305 1.1816517852817463 9 0.21014502885941905 0.9386118359976174 >10 1.1515557364553355 10.678362325128795 >50 0.10111014020580894 3.4611257472440276 >100 0.06273659465012368 5.763572827646541 >500 0.004689898665106441 1.5914037698587333 >1k 0.003766130746197943 3.505905493019911 >5k 4.263544240978803E-4 1.3202511652820415 >10k+ 3.5529535341490026E-4 3.229956848104799 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24662 0.8685903949300413 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24352 0.8576722608602856 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19319 0.680411071269705 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12918 0.4549692126229126 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10340 0.36417260090733217 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7232 0.2547095019112018 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 7171 0.25256109488457246 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6499 0.228893397804328 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5764 0.2030068541228107 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5520 0.19441322601629338 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5252 0.18497432301405303 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4751 0.1673292095658351 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4604 0.16215190082953165 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3912 0.1377798080028514 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3754 0.13221508160600823 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3145 0.11076623112703672 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3087 0.10872348346237276 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3071 0.1081599668652241 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2889 0.1017499655726579 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.521978732179228E-5 0.0 3 0.0 0.0 0.0 3.521978732179228E-5 0.0 4 0.0 0.0 0.0 3.521978732179228E-5 0.0 5 0.0 0.0 0.0 3.521978732179228E-5 0.0 6 3.521978732179228E-5 0.0 0.0 3.521978732179228E-5 0.0 7 3.521978732179228E-5 0.0 0.0 7.043957464358456E-5 0.0 8 3.521978732179228E-5 0.0 0.0 7.043957464358456E-5 0.0 9 3.521978732179228E-5 0.0 0.0 1.0565936196537683E-4 0.0 10 3.521978732179228E-5 0.0 0.0 2.4653851125254597E-4 0.0 11 3.521978732179228E-5 7.043957464358456E-5 0.0 3.874176605397151E-4 0.0 12 3.521978732179228E-5 7.043957464358456E-5 0.0 7.043957464358456E-4 0.0 13 3.521978732179228E-5 7.043957464358456E-5 0.0 9.157144703665993E-4 0.0 14 3.521978732179228E-5 1.0565936196537683E-4 0.0 0.0011974727689409374 0.0 15 3.521978732179228E-5 1.0565936196537683E-4 0.0 0.0017962091534114062 0.0 16 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.002535824687169044 0.0 17 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.003979835967362528 0.0 18 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.0047898910757637496 0.0 19 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.005388627460234219 0.0 20 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.007043957464358455 0.0 21 7.043957464358456E-5 1.0565936196537683E-4 0.0 0.009967199812067215 0.0 22 1.0565936196537683E-4 1.408791492871691E-4 0.0 0.017469014511608972 0.0 23 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.0273657747490326 0.0 24 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.04029143669613037 0.0 25 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.04568006415636459 0.0 26 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.05346363715448068 0.0 27 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.09629089853778008 0.0 28 1.0565936196537683E-4 2.1131872393075367E-4 0.0 0.16951283637978623 0.0 29 1.0565936196537683E-4 2.4653851125254597E-4 0.0 0.2610490636291244 0.0 30 1.408791492871691E-4 2.4653851125254597E-4 0.0 0.424046239354379 0.0 31 1.408791492871691E-4 2.4653851125254597E-4 0.0 0.657025132488035 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5795 0.0 27.646246 1 GTATTGG 890 0.0 18.292135 1 GTATCAA 9345 0.0 17.12413 2 ATTGGAC 855 0.0 16.660818 3 CAATGCG 125 1.6601189E-7 16.28 19 ACGTTTA 140 3.4788172E-8 15.857143 26 CGCGTAA 70 0.0025937522 15.857143 10 TATACCG 155 7.221388E-9 15.5161295 5 ACGGACC 265 0.0 15.358491 8 TTGGACC 1305 0.0 14.885057 4 GACGGAC 285 0.0 14.280702 7 TACGTTA 130 4.449219E-6 14.230769 19 TGGACCC 1495 0.0 14.107023 5 GGACCCT 1465 0.0 14.017064 6 TGCGTAA 80 0.0063016303 13.875 10 CGTCTGT 770 0.0 13.694806 34 GTACTAG 295 0.0 13.169492 1 GTCGCGT 85 0.0094091855 13.058823 8 CGCATTG 115 3.5800537E-4 12.869565 14 TATTGGA 1265 0.0 12.869565 2 >>END_MODULE