##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088115_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3271512 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.611079830977236 31.0 31.0 34.0 30.0 34.0 2 31.791689897515276 31.0 31.0 34.0 30.0 34.0 3 31.88658088370148 31.0 31.0 34.0 30.0 34.0 4 35.59078279401084 37.0 35.0 37.0 33.0 37.0 5 35.48376836154048 37.0 35.0 37.0 33.0 37.0 6 35.49669663446137 37.0 35.0 37.0 33.0 37.0 7 35.36597787200536 37.0 35.0 37.0 33.0 37.0 8 35.410283685341824 37.0 35.0 37.0 33.0 37.0 9 36.922520840516555 39.0 37.0 39.0 33.0 39.0 10 36.78614139272605 39.0 37.0 39.0 32.0 39.0 11 36.85209774562954 39.0 37.0 39.0 32.0 39.0 12 36.74128048437542 39.0 35.0 39.0 32.0 39.0 13 36.75063701432243 39.0 35.0 39.0 32.0 39.0 14 37.7579950799508 40.0 37.0 41.0 32.0 41.0 15 37.760798982244296 40.0 37.0 41.0 32.0 41.0 16 37.64700328166303 39.0 36.0 41.0 32.0 41.0 17 37.66444842629341 39.0 37.0 41.0 32.0 41.0 18 37.643974712609946 39.0 37.0 41.0 32.0 41.0 19 37.684459357019016 39.0 37.0 41.0 32.0 41.0 20 37.594679768865284 39.0 37.0 41.0 32.0 41.0 21 37.509367534033196 39.0 36.0 41.0 32.0 41.0 22 37.40897817278372 39.0 36.0 41.0 32.0 41.0 23 37.18729718857825 39.0 36.0 41.0 31.0 41.0 24 37.029522740555436 39.0 36.0 41.0 31.0 41.0 25 36.925216535962576 39.0 36.0 40.0 31.0 41.0 26 37.056135817322385 39.0 36.0 41.0 31.0 41.0 27 36.96893638170974 39.0 36.0 41.0 31.0 41.0 28 36.87077137421473 39.0 35.0 41.0 30.0 41.0 29 36.78942091607795 39.0 35.0 41.0 30.0 41.0 30 36.59906061784276 39.0 35.0 40.0 30.0 41.0 31 36.420886733718234 39.0 35.0 40.0 30.0 41.0 32 36.25930823423543 38.0 35.0 40.0 30.0 41.0 33 36.05059098056189 38.0 35.0 40.0 29.0 41.0 34 35.90627514128024 38.0 35.0 40.0 29.0 41.0 35 35.69903121247912 38.0 35.0 40.0 27.0 41.0 36 35.61165448881129 38.0 35.0 40.0 27.0 41.0 37 35.461869924365246 38.0 34.0 40.0 26.0 41.0 38 35.33490691765765 38.0 34.0 40.0 25.0 41.0 39 35.224031579282 38.0 34.0 40.0 25.0 41.0 40 35.02370402431659 38.0 34.0 40.0 24.0 41.0 41 34.867680143004215 38.0 34.0 40.0 24.0 41.0 42 34.653264912370794 38.0 33.0 40.0 23.0 41.0 43 34.33921226637714 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 7.0 13 9.0 14 20.0 15 26.0 16 70.0 17 118.0 18 266.0 19 558.0 20 1200.0 21 2490.0 22 4579.0 23 7875.0 24 12721.0 25 19515.0 26 28616.0 27 39811.0 28 54459.0 29 70859.0 30 89773.0 31 110705.0 32 136251.0 33 169083.0 34 207364.0 35 254856.0 36 327098.0 37 450360.0 38 598760.0 39 684062.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.64961400111019 22.613305407407953 13.820276373737892 22.916804217743966 2 18.125044322013796 22.726280692230382 35.85317736875182 23.295497617004003 3 19.655773844020747 25.529204844732345 32.070614443718995 22.744406867527918 4 13.381580137868973 15.746633360965816 35.156190776619496 35.715595724545715 5 11.520819731060133 40.513041064804284 34.280082114936455 13.686057089199121 6 32.007952286282304 36.52998980288014 15.258265902738549 16.203792008099008 7 25.4976903645776 34.8049770259134 21.000350908081643 18.69698170142735 8 28.06350702672037 34.09487723107848 19.702510643396693 18.139105098804468 9 25.627538581548837 13.920474691824452 22.72197075847498 37.73001596815173 10 16.663029204844733 28.057577046943432 32.848389368585536 22.4310043796263 11 32.47266095921397 21.903113911854824 24.101699764512556 21.522525364418655 12 20.080531570723263 27.463723195880068 31.2576570099697 21.198088223426968 13 31.01590334988837 20.973941101240037 27.899240473518056 20.110915075353535 14 20.867170898349144 22.45897309867731 27.769392256546823 28.904463746426728 15 23.43793939927471 29.069463905374644 25.757019995647273 21.73557669970338 16 22.378093065224885 28.45213467045207 26.06702955697549 23.102742707347552 17 20.047794414325853 27.23318759032521 27.359153810225973 25.359864185122966 18 21.135212097647816 26.589662516903502 30.9923056984049 21.282819687043787 19 20.687406923771025 24.962891776035057 31.94000205409609 22.409699246097826 20 24.79058612653721 24.10912752268676 30.79713600316918 20.303150347606856 21 23.957118298817186 25.09607178576756 29.64354096821286 21.303268947202394 22 22.56100543112787 24.54229114855761 30.73743883562096 22.15926458469356 23 21.487526256972313 26.270513450661348 31.6184076353686 20.62355265699774 24 20.470198489261236 25.574413298804956 30.176627810015678 23.778760401918134 25 21.51521987386872 26.4681284983824 30.993895177520365 21.02275645022852 26 22.863403832845485 25.55689846162875 29.81181178610991 21.767885919415857 27 21.55648519705873 26.827595313726498 29.5198672662671 22.096052222947677 28 21.346796221441338 26.257277980334475 29.75819743286896 22.637728365355226 29 20.420374432372554 26.093103127850366 30.909683351306672 22.576839088470408 30 19.917426559951483 26.404977270448647 32.354825536326935 21.322770633272935 31 21.221196804413374 25.860061035998033 31.359475374077796 21.559266785510797 32 22.236109786545182 25.92538251426252 29.61422730529492 22.224280393897377 33 22.980352815456584 25.80449040076882 29.41211892238207 21.80303786139253 34 21.43009104047303 28.107706772892776 29.496177914065424 20.96602427256877 35 20.394239727685548 28.675364785456996 29.78084751026437 21.149547976593087 36 20.971067812069773 25.550632245885087 31.676393056177083 21.801906885868064 37 21.167826986420955 25.777316421275543 31.014313870772902 22.040542721530596 38 21.21175163043877 25.26807176620474 31.868536627712203 21.651639975644287 39 22.147251790609356 24.83747576044349 31.748255852339835 21.26701659660732 40 20.765444234959247 25.40608134709578 31.000436495418633 22.82803792252634 41 21.34337272796187 25.121381183990763 30.98457227117003 22.550673816877335 42 19.339100697169993 26.5905795240855 31.357396824465262 22.712922954279243 43 19.89492931708641 26.3348567879317 30.857383375026593 22.9128305199553 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 243.0 1 384.5 2 526.0 3 1037.5 4 1549.0 5 1549.0 6 2817.0 7 4085.0 8 4643.5 9 5202.0 10 8448.0 11 11694.0 12 11694.0 13 22726.5 14 33759.0 15 53557.5 16 73356.0 17 69382.5 18 65409.0 19 65409.0 20 71926.5 21 78444.0 22 63885.0 23 49326.0 24 55721.0 25 62116.0 26 62116.0 27 67786.5 28 73457.0 29 78054.0 30 82651.0 31 89703.0 32 96755.0 33 96755.0 34 106898.0 35 117041.0 36 129239.0 37 141437.0 38 149418.5 39 157400.0 40 157400.0 41 165684.0 42 173968.0 43 195737.5 44 217507.0 45 268682.5 46 319858.0 47 319858.0 48 323884.0 49 327910.0 50 299100.0 51 270290.0 52 253248.0 53 236206.0 54 236206.0 55 209458.0 56 182710.0 57 155914.5 58 129119.0 59 115221.5 60 101324.0 61 101324.0 62 90097.0 63 78870.0 64 68802.0 65 58734.0 66 50413.5 67 42093.0 68 42093.0 69 35828.0 70 29563.0 71 24714.0 72 19865.0 73 16066.0 74 12267.0 75 12267.0 76 9514.5 77 6762.0 78 5393.5 79 4025.0 80 3258.5 81 2492.0 82 2492.0 83 1944.5 84 1397.0 85 1086.0 86 775.0 87 651.5 88 528.0 89 528.0 90 517.0 91 506.0 92 322.0 93 138.0 94 120.5 95 103.0 96 103.0 97 66.0 98 29.0 99 26.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3271512.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.20506271146135 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17262767817122 31.3046040263109 2 13.416375925643436 11.324779746046431 3 5.03476889334035 6.37478210643433 4 2.414408962453119 4.076011266857928 5 1.3076380013237592 2.759447192487962 6 0.8060749572186048 2.041226647172984 7 0.5097204981738582 1.5058949913521504 8 0.35154649721680853 1.1869633568823983 9 0.27366547743882286 1.039506177354078 >10 1.4424438243625892 11.485332878678499 >50 0.1505035818002033 4.4347149194887905 >100 0.10510181186409087 8.481018912548064 >500 0.008361766654878033 2.399350796904809 >1k 0.005598748107943874 4.71016749493858 >5k 6.543991294999334E-4 2.031650425344907 >10k+ 5.089771007221705E-4 4.8445490611971955 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37037 1.1321064999914412 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36071 1.1025788687310332 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29476 0.9009901232213118 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 19883 0.6077617933236986 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14357 0.4388490703992527 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10533 0.3219612216002876 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 10509 0.32122761585468734 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9841 0.3008089226021485 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8858 0.27076165393860696 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8542 0.2611025116215377 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7997 0.2444435478151998 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7318 0.22368861859592748 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7097 0.21693333235519233 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5832 0.1782661961808485 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5718 0.17478156888924753 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5001 0.15286509723944158 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4878 0.14910536779324055 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4348 0.13290490757790283 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4009 0.12254272642130001 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3837 0.1172852185778319 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3765 0.1150844013410313 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3710 0.11340322150736418 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3579 0.10939895681262976 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3526 0.10777891079109599 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3454 0.10557809355429537 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3302 0.10093192383216079 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.056690606667498E-5 0.0 3 0.0 0.0 0.0 3.056690606667498E-5 0.0 4 0.0 0.0 0.0 6.113381213334996E-5 0.0 5 0.0 0.0 0.0 6.113381213334996E-5 0.0 6 0.0 0.0 0.0 6.113381213334996E-5 0.0 7 0.0 0.0 0.0 6.113381213334996E-5 0.0 8 0.0 0.0 0.0 9.170071820002494E-5 0.0 9 0.0 0.0 0.0 3.056690606667498E-4 0.0 10 0.0 0.0 0.0 3.9736977886677474E-4 0.0 11 0.0 0.0 0.0 7.336057456001995E-4 0.0 12 3.056690606667498E-5 0.0 0.0 9.781409941335994E-4 0.0 13 3.056690606667498E-5 0.0 0.0 0.0010392748062669494 0.0 14 3.056690606667498E-5 0.0 0.0 0.0011921093366003242 0.0 15 3.056690606667498E-5 0.0 0.0 0.001742313645800474 0.0 16 3.056690606667498E-5 0.0 0.0 0.003026123700600823 0.0 17 3.056690606667498E-5 0.0 0.0 0.005043539501001372 0.0 18 3.056690606667498E-5 0.0 0.0 0.005777145246601572 0.0 19 3.056690606667498E-5 0.0 0.0 0.006602451710401796 0.0 20 3.056690606667498E-5 0.0 0.0 0.00840589916833562 0.0 21 3.056690606667498E-5 0.0 0.0 0.011645991211403167 0.0 22 3.056690606667498E-5 0.0 0.0 0.020418693252538887 0.0 23 3.056690606667498E-5 0.0 0.0 0.034020966452209256 0.0 24 3.056690606667498E-5 0.0 0.0 0.05138296909808064 0.0 25 3.056690606667498E-5 0.0 0.0 0.05749635031141564 0.0 26 3.056690606667498E-5 0.0 0.0 0.06633018616468471 0.0 27 3.056690606667498E-5 0.0 0.0 0.11636821139583166 0.0 28 3.056690606667498E-5 0.0 0.0 0.19874602324552074 0.0 29 3.056690606667498E-5 0.0 0.0 0.30145082762954867 0.0 30 3.056690606667498E-5 0.0 0.0 0.492616258170534 0.0 31 3.056690606667498E-5 0.0 0.0 0.7408501023380015 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8755 0.0 27.956024 1 GTATTGG 1285 0.0 21.451363 1 ATTGGAC 1215 0.0 20.86008 3 CAATGCG 210 0.0 17.619047 19 TATACCG 170 5.456968E-12 17.411764 5 TGCGACG 215 0.0 17.209303 22 TAATACG 65 0.0015807768 17.076923 4 GTATCAA 14400 0.0 17.009722 2 TAGGTCG 255 0.0 16.686274 21 TTGGACC 2015 0.0 16.526054 4 TATTGGA 1685 0.0 16.468842 2 GGACCCT 2060 0.0 16.344662 6 CTGTGCG 360 0.0 15.930555 9 CGACTAT 70 0.0025938656 15.857143 36 TGGACCC 2165 0.0 15.722864 5 CATTGCG 285 0.0 15.578947 29 CGACGAG 275 0.0 15.472727 24 CGTCTGT 815 0.0 15.435582 34 TGTGCGC 405 0.0 15.074076 10 CGATCTG 335 0.0 14.910448 33 >>END_MODULE