##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088114_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2497804 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.625001000879173 31.0 31.0 34.0 30.0 34.0 2 31.83306496426461 31.0 31.0 34.0 30.0 34.0 3 31.918121277730357 31.0 31.0 34.0 30.0 34.0 4 35.61705442060306 37.0 35.0 37.0 33.0 37.0 5 35.491507740399165 37.0 35.0 37.0 33.0 37.0 6 35.50148570504331 37.0 35.0 37.0 33.0 37.0 7 35.38804926247216 37.0 35.0 37.0 33.0 37.0 8 35.394976947750905 37.0 35.0 37.0 33.0 37.0 9 36.97018941438159 39.0 37.0 39.0 33.0 39.0 10 36.79873761111761 39.0 37.0 39.0 32.0 39.0 11 36.8449285852693 39.0 37.0 39.0 32.0 39.0 12 36.73401075504724 39.0 35.0 39.0 32.0 39.0 13 36.746894472104294 39.0 35.0 39.0 32.0 39.0 14 37.79539227257223 40.0 37.0 41.0 32.0 41.0 15 37.79234639707519 40.0 37.0 41.0 32.0 41.0 16 37.684592145740815 39.0 37.0 41.0 32.0 41.0 17 37.659390408534854 39.0 37.0 41.0 32.0 41.0 18 37.63798800866681 39.0 36.0 41.0 32.0 41.0 19 37.661469034399815 39.0 37.0 41.0 32.0 41.0 20 37.57795967978272 39.0 36.0 41.0 32.0 41.0 21 37.48315640458579 39.0 36.0 41.0 32.0 41.0 22 37.36598828410876 39.0 36.0 41.0 31.0 41.0 23 37.175022940150626 39.0 36.0 41.0 31.0 41.0 24 37.02780242164717 39.0 36.0 41.0 31.0 41.0 25 36.88561352291853 39.0 36.0 40.0 30.0 41.0 26 37.068660711569045 39.0 36.0 41.0 31.0 41.0 27 36.99656057881243 39.0 36.0 41.0 31.0 41.0 28 36.929759500745455 39.0 36.0 41.0 31.0 41.0 29 36.8530633308298 39.0 36.0 41.0 30.0 41.0 30 36.65016870819328 39.0 35.0 40.0 30.0 41.0 31 36.490437600388184 39.0 35.0 40.0 30.0 41.0 32 36.32946740416782 38.0 35.0 40.0 30.0 41.0 33 36.18550494754592 38.0 35.0 40.0 30.0 41.0 34 36.061882757814466 38.0 35.0 40.0 29.0 41.0 35 35.89612635739233 38.0 35.0 40.0 28.0 41.0 36 35.8062273901395 38.0 35.0 40.0 27.0 41.0 37 35.64391121160828 38.0 34.0 40.0 27.0 41.0 38 35.57104760821906 38.0 34.0 40.0 26.0 41.0 39 35.4913540053583 38.0 34.0 40.0 26.0 41.0 40 35.35049307311542 38.0 34.0 40.0 25.0 41.0 41 35.229195325173635 38.0 34.0 40.0 25.0 41.0 42 35.07075975536912 38.0 34.0 40.0 24.0 41.0 43 34.75080310544782 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 6.0 15 11.0 16 31.0 17 69.0 18 167.0 19 393.0 20 834.0 21 1759.0 22 3241.0 23 5676.0 24 9240.0 25 14119.0 26 20856.0 27 28591.0 28 39156.0 29 51302.0 30 66156.0 31 83261.0 32 103047.0 33 127113.0 34 156476.0 35 194064.0 36 248458.0 37 335605.0 38 468581.0 39 539589.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.117839510225785 22.051089677172428 13.94292746748744 23.888143345114347 2 18.738579968644455 23.36152075983544 35.19579598719515 22.70410328432495 3 18.80191560266538 24.87112679777917 32.796728646443036 23.530228953112413 4 13.760847528469009 17.17608747523825 37.08453505559283 31.97852994069991 5 12.474637721774808 38.632534818584645 35.57596993198826 13.31685752765229 6 31.466680332003634 38.80168339869742 14.363216649504926 15.368419619794027 7 25.73924935663487 33.32715457257655 22.297185848048926 18.636410222739656 8 25.947792540967985 35.53441342875582 19.565105989100825 18.95268804117537 9 24.706221945356802 14.8793500210585 21.976063774419448 38.438364259165255 10 16.068874899711908 28.279961117845914 34.223341783422555 21.42782219901962 11 33.115888996894874 23.280129265546854 23.36488371385425 20.23909802370402 12 20.461493375781288 27.67931350898629 30.941979434735472 20.91721368049695 13 29.904708295767 21.960490094499008 26.149169430427687 21.985632179306304 14 20.410048186326872 23.34666771291903 27.870121114386876 28.373162986367223 15 22.80739401490269 30.062246677481504 25.257386087939647 21.872973219676165 16 22.005769868252273 28.97989594059422 26.42845475465649 22.58587943649702 17 21.54136193232135 27.941143500450792 27.34305814227217 23.17443642495568 18 22.06053797655861 27.10164608592187 29.272913327066497 21.56490261045302 19 22.414288711203923 26.2283189553704 30.256457272067784 21.100935061357898 20 22.988312934081296 25.963045939553304 29.893098097368732 21.15554302899667 21 22.04316271412809 26.680115813730783 30.205412434282273 21.071309037858853 22 21.534195637447933 27.011566960418033 29.802138198193294 21.652099203940743 23 22.077032465317533 26.84285876714106 30.240122923976422 20.839985843564985 24 22.083277951352468 27.163460383600956 28.652768591931157 22.100493073115423 25 22.094007376079148 27.13351407876679 29.569453808225145 21.203024736928917 26 21.563901731280758 27.78989063993812 29.362311854733196 21.283895774047924 27 21.157865068676326 27.579225591759805 29.092274654056123 22.17063468550775 28 21.22068024552767 27.39462343722726 29.53077983700883 21.85391648023624 29 21.665871301351107 27.311510430762382 29.081545229329443 21.941073038557068 30 21.842786703840652 27.395904562567758 29.873360760091668 20.887947973499923 31 22.17271651418606 27.302422447878214 29.70325133597352 20.821609701962203 32 21.5266690260725 27.121023106696924 29.476332010037616 21.87597585719296 33 21.32905544230052 27.068016545733776 29.884170255152124 21.718757756813584 34 20.996163029605206 27.047398434785112 30.579741244709354 21.376697290900324 35 20.816885552269113 28.21029992745628 29.524414245473224 21.448400274801386 36 22.241216684735875 26.996073350831367 29.30001713505143 21.46269282938133 37 21.372613703877484 26.9895476186282 29.826919966498572 21.81091871099574 38 21.237014593619037 26.304986299965886 30.450387620485834 22.00761148592924 39 20.80795771005251 26.303905350459843 31.16757760016398 21.72055933932366 40 20.088245514860255 26.501919285900737 31.00367362691388 22.406161572325132 41 20.761036494456732 25.6454469606102 31.245405964599303 22.348110580333767 42 19.902722551489227 27.114577444827535 30.605443821853118 22.37725618183012 43 20.293585885842123 26.498596367048815 30.373239853887657 22.834577893221404 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 328.0 1 438.0 2 548.0 3 900.5 4 1253.0 5 1253.0 6 2006.5 7 2760.0 8 3157.5 9 3555.0 10 5635.0 11 7715.0 12 7715.0 13 14138.0 14 20561.0 15 31841.5 16 43122.0 17 41257.0 18 39392.0 19 39392.0 20 45234.5 21 51077.0 22 44976.5 23 38876.0 24 45326.0 25 51776.0 26 51776.0 27 57953.5 28 64131.0 29 69467.5 30 74804.0 31 83654.0 32 92504.0 33 92504.0 34 104188.5 35 115873.0 36 127586.0 37 139299.0 38 146711.0 39 154123.0 40 154123.0 41 157558.0 42 160993.0 43 167665.0 44 174337.0 45 175256.5 46 176176.0 47 176176.0 48 199814.0 49 223452.0 50 206735.5 51 190019.0 52 173721.5 53 157424.0 54 157424.0 55 143082.0 56 128740.0 57 115174.0 58 101608.0 59 92697.0 60 83786.0 61 83786.0 62 74018.5 63 64251.0 64 55977.0 65 47703.0 66 39924.0 67 32145.0 68 32145.0 69 26995.5 70 21846.0 71 17828.5 72 13811.0 73 11187.0 74 8563.0 75 8563.0 76 6680.5 77 4798.0 78 3843.0 79 2888.0 80 2264.0 81 1640.0 82 1640.0 83 1272.5 84 905.0 85 711.5 86 518.0 87 384.5 88 251.0 89 251.0 90 213.0 91 175.0 92 112.0 93 49.0 94 34.0 95 19.0 96 19.0 97 12.0 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2497804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.02909927292995 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24882840652245 34.17606693622563 2 13.511154753855848 12.438125669143004 3 5.034023601507856 6.951347162882324 4 2.4651024871550797 4.538657883968308 5 1.33410359125175 3.0703793321049577 6 0.7961516498848911 2.1987685997315167 7 0.49618847795893184 1.598737609703898 8 0.3462303785899902 1.2749337973938222 9 0.23174047837053843 0.9600124936026411 >10 1.2806523249126356 11.079786763330013 >50 0.13871668873143223 4.510336359648457 >100 0.1052458308504123 9.44338086276905 >500 0.008023841158596147 2.473187443000623 >1k 0.003488626590693762 2.7497033439109146 >5k 8.721566476734405E-5 0.31417152156284134 >10k+ 2.616469943020322E-4 2.2224042210220922 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20392 0.8163971232330478 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19645 0.7864908535657722 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15323 0.6134588622646132 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7826 0.3133152160858098 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4483 0.179477653170545 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4125 0.16514506342371138 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3883 0.155456553036187 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3612 0.14460702280883528 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3009 0.12046581717380547 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2603 0.10421153941622321 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.00351668905967E-5 0.0 5 0.0 0.0 0.0 8.00703337811934E-5 0.0 6 0.0 0.0 0.0 8.00703337811934E-5 0.0 7 0.0 0.0 0.0 8.00703337811934E-5 0.0 8 0.0 0.0 0.0 8.00703337811934E-5 0.0 9 0.0 0.0 0.0 8.00703337811934E-5 0.0 10 0.0 0.0 0.0 1.601406675623868E-4 0.0 11 0.0 0.0 0.0 1.601406675623868E-4 0.0 12 0.0 0.0 0.0 2.001758344529835E-4 0.0 13 0.0 0.0 0.0 2.402110013435802E-4 0.0 14 0.0 0.0 0.0 2.402110013435802E-4 0.0 15 0.0 0.0 0.0 3.202813351247736E-4 0.0 16 0.0 0.0 0.0 4.804220026871604E-4 0.0 17 0.0 0.0 0.0 8.00703337811934E-4 0.0 18 0.0 0.0 0.0 0.0010008791722649175 0.0 19 0.0 0.0 0.0 0.001481301174952078 0.0 20 0.0 0.0 0.0 0.0025622506809981887 0.0 21 0.0 0.0 0.0 0.00412362218973146 0.0 22 0.0 0.0 0.0 0.006045310200480102 0.0 23 0.0 0.0 0.0 0.007446541041650987 0.0 24 0.0 0.0 0.0 0.010609319226008126 0.0 25 0.0 0.0 0.0 0.014692906248848989 0.0 26 0.0 0.0 0.0 0.022860080294530717 0.0 27 0.0 0.0 0.0 0.06854020571670155 0.0 28 0.0 0.0 0.0 0.16058105439818338 0.0 29 0.0 0.0 0.0 0.2689962863379192 0.0 30 0.0 0.0 0.0 0.43257997825289735 0.0 31 0.0 0.0 0.0 0.679997309636785 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5630 0.0 27.207815 1 TAGACCG 50 0.007037138 18.499998 5 GTATCAA 8770 0.0 17.487457 2 TATACCG 160 3.45608E-11 17.34375 5 ACGTTTA 170 8.54925E-11 16.32353 26 CTAGTAC 310 0.0 15.5161295 3 CTAGGCA 420 0.0 14.97619 4 GTACTAG 260 0.0 14.942307 1 CGGTATA 215 1.2732926E-11 14.627907 26 TAATACT 770 0.0 14.415584 4 TTAACGG 375 0.0 14.306666 35 CGACGAG 260 0.0 14.230769 24 CAATGCG 235 3.6379788E-12 14.170214 19 CGACACA 80 0.0063013486 13.875001 4 GTATTAG 600 0.0 13.875 1 ATGCGAC 240 5.456968E-12 13.874999 21 TAAACGT 135 6.573884E-6 13.703704 4 TCACGTT 190 7.1377144E-9 13.631579 24 CTAATAC 680 0.0 13.6029415 3 GTCTAAC 150 1.3071385E-6 13.566667 1 >>END_MODULE