##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088113_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1797283 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.110990867882244 31.0 31.0 33.0 30.0 34.0 2 31.330058204523162 31.0 31.0 34.0 30.0 34.0 3 31.381587652028088 31.0 31.0 34.0 28.0 34.0 4 35.13873496828268 35.0 35.0 37.0 32.0 37.0 5 34.973327517146714 35.0 35.0 37.0 32.0 37.0 6 35.046674897609336 36.0 35.0 37.0 32.0 37.0 7 34.92210798188154 36.0 35.0 37.0 32.0 37.0 8 34.957254366730226 36.0 35.0 37.0 32.0 37.0 9 36.44489821580686 38.0 35.0 39.0 32.0 39.0 10 36.1782034326258 38.0 35.0 39.0 32.0 39.0 11 36.29490681211584 38.0 35.0 39.0 32.0 39.0 12 36.12795480733975 38.0 35.0 39.0 31.0 39.0 13 36.188827802855755 38.0 35.0 39.0 32.0 39.0 14 37.08711148995456 39.0 36.0 40.0 31.0 41.0 15 37.11201074065687 39.0 36.0 40.0 31.0 41.0 16 36.951704878975654 38.0 36.0 40.0 31.0 41.0 17 36.93524336456752 38.0 36.0 40.0 31.0 41.0 18 36.90952509983124 38.0 36.0 40.0 31.0 41.0 19 36.937812242145505 39.0 36.0 40.0 31.0 41.0 20 36.85215795175273 39.0 36.0 40.0 31.0 41.0 21 36.75745667209894 39.0 36.0 40.0 30.0 41.0 22 36.62788943087983 38.0 35.0 40.0 30.0 41.0 23 36.418184559693714 38.0 35.0 40.0 30.0 41.0 24 36.27456555255906 38.0 35.0 40.0 29.0 41.0 25 36.117410001652495 38.0 34.0 40.0 29.0 41.0 26 36.25944105630555 38.0 35.0 40.0 30.0 41.0 27 36.16312344800457 38.0 35.0 40.0 29.0 41.0 28 36.08574164447113 38.0 35.0 40.0 29.0 41.0 29 36.00097424835154 38.0 35.0 40.0 29.0 41.0 30 35.77780627758678 38.0 34.0 40.0 27.0 41.0 31 35.606942813124036 38.0 34.0 40.0 27.0 41.0 32 35.4459681641678 38.0 34.0 40.0 27.0 41.0 33 35.28279853534474 38.0 34.0 40.0 26.0 41.0 34 35.160137830269356 38.0 34.0 40.0 26.0 41.0 35 34.949680156102296 38.0 33.0 40.0 25.0 41.0 36 34.88062647896853 38.0 33.0 40.0 25.0 41.0 37 34.71377295617886 38.0 33.0 40.0 25.0 41.0 38 34.62990580782214 38.0 33.0 40.0 24.0 41.0 39 34.54426375812824 38.0 33.0 40.0 24.0 41.0 40 34.387285140959996 38.0 33.0 40.0 23.0 41.0 41 34.250405751348005 38.0 33.0 40.0 23.0 41.0 42 34.06724038451374 37.0 33.0 40.0 22.0 41.0 43 33.73987902851137 37.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 5.0 14 6.0 15 22.0 16 42.0 17 104.0 18 270.0 19 561.0 20 1061.0 21 2189.0 22 3806.0 23 6263.0 24 9930.0 25 14846.0 26 21082.0 27 28780.0 28 38164.0 29 48822.0 30 61256.0 31 74722.0 32 90326.0 33 108529.0 34 130034.0 35 158785.0 36 200698.0 37 259841.0 38 334838.0 39 202299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.32968987076604 24.127808475348623 15.0005869971507 22.541914656734637 2 20.330298567337476 24.72259516169685 33.3967438628196 21.55036240814607 3 20.60048417528013 25.63953478667522 32.1854710693864 21.574509968658248 4 15.274166617054744 18.195965799487336 36.00234353743957 30.52752404601835 5 12.298730917724141 39.52944527934666 35.39398080324579 12.777842999683411 6 31.850687955096664 39.13785419435893 13.752870304787837 15.258587545756566 7 25.595468270717518 33.494335616594604 22.151380723013574 18.758815389674304 8 26.35767433398079 35.96790266196253 19.22195892355294 18.452464080503738 9 24.723262836181057 14.485587411665273 21.623361485086097 39.167788267067564 10 15.772418700894628 28.56528437647271 34.479044201720036 21.18325272091262 11 33.77030773673372 22.868852595834934 23.235016410882427 20.125823256548912 12 20.195650879688955 27.66525917176093 31.21867841625387 20.92041153229625 13 30.47171758704667 21.753669288587275 26.35934352019131 21.415269604174746 14 20.24572646600452 22.835246313463156 27.784939823055133 29.13408739747719 15 22.715732580790004 30.264404659700222 25.105005722526723 21.914857036983047 16 22.02496768733694 28.79424108501555 26.43723887668219 22.743552350965317 17 21.577737061998583 27.653463589206595 27.46061694235132 23.308182406443503 18 22.32825882178822 26.4951596381872 29.435876264339004 21.740705275685578 19 22.526168666815412 25.616722575131462 30.27903785881244 21.578070899240686 20 23.084900931016428 25.599307399001713 30.286549196759776 21.02924247322208 21 22.42807615717725 26.077195411073266 30.496087705720242 20.998640726029233 22 21.379382100648588 26.492043823927563 30.12580656468681 22.00276751073704 23 22.078771122856 26.573611390081588 30.732667031291122 20.614950455771293 24 22.148153629673235 26.67498663260043 28.75991148861921 22.416948249107126 25 22.16022740992932 26.63503744262868 29.777836879333975 21.426898268108026 26 21.97088605411613 27.27550419160477 29.597564768597934 21.156044985681163 27 21.433686292030803 27.192601276482335 29.15072362004203 22.22298881144483 28 21.55442409459167 26.967094219441236 29.78712868257253 21.691353003394568 29 22.041325712200027 26.514577837769565 29.248537931978436 22.195558518051968 30 22.000263731421263 26.76656931601757 30.034446439431072 21.198720513130098 31 22.301384923798867 26.6855025057267 30.178942325721657 20.834170244752773 32 21.63387735821237 26.589524298621864 29.65759983263626 22.118998510529504 33 21.79406359488183 26.553748074176408 29.961614281112105 21.690574049829657 34 21.153596845905735 26.96909724289386 30.48829817007116 21.389007741129248 35 21.0266274148256 28.227830564246144 29.555668194713906 21.18987382621435 36 22.70738664973741 26.540283305411556 29.25165374623807 21.500676298612962 37 21.63944131224743 27.072086032082872 29.56023063702266 21.728242018647034 38 21.681393525671805 25.896366904933725 30.511722416558772 21.910517152835695 39 21.19699568737923 26.08236988832588 31.068674215468572 21.651960208826324 40 20.526650505234848 26.55597365579043 30.535035383965685 22.382340455009032 41 21.494778507335795 25.43255569657088 30.918614375142923 22.154051420950402 42 20.57655917292936 27.17807935645082 29.97580236390151 22.269559106718305 43 21.050886254418476 26.70152669334768 29.570746510148933 22.676840542084914 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 152.0 1 207.0 2 262.0 3 392.5 4 523.0 5 523.0 6 1086.5 7 1650.0 8 1879.0 9 2108.0 10 3412.5 11 4717.0 12 4717.0 13 9825.0 14 14933.0 15 24122.5 16 33312.0 17 31311.5 18 29311.0 19 29311.0 20 33815.0 21 38319.0 22 32750.5 23 27182.0 24 31384.5 25 35587.0 26 35587.0 27 40749.0 28 45911.0 29 49158.0 30 52405.0 31 57894.5 32 63384.0 33 63384.0 34 72477.0 35 81570.0 36 88312.0 37 95054.0 38 101363.5 39 107673.0 40 107673.0 41 110430.0 42 113187.0 43 117804.5 44 122422.0 45 124819.5 46 127217.0 47 127217.0 48 148421.5 49 169626.0 50 156035.0 51 142444.0 52 130768.5 53 119093.0 54 119093.0 55 106883.5 56 94674.0 57 83218.5 58 71763.0 59 65536.0 60 59309.0 61 59309.0 62 52706.5 63 46104.0 64 39846.0 65 33588.0 66 28140.5 67 22693.0 68 22693.0 69 19193.0 70 15693.0 71 13000.0 72 10307.0 73 8421.0 74 6535.0 75 6535.0 76 5156.0 77 3777.0 78 2971.0 79 2165.0 80 1702.5 81 1240.0 82 1240.0 83 952.0 84 664.0 85 501.0 86 338.0 87 265.0 88 192.0 89 192.0 90 156.0 91 120.0 92 85.5 93 51.0 94 34.0 95 17.0 96 17.0 97 11.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1797283.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.63800196653282 #Duplication Level Percentage of deduplicated Percentage of total 1 78.79708432412062 39.90126910961872 2 12.0856278677833 12.239840954711893 3 3.8656051060647565 5.872395568882393 4 1.7067861751682025 3.457129667784739 5 0.8672385980473833 2.195761491668828 6 0.5284894229207527 1.605698906229172 7 0.33815932392709247 1.1986598757015063 8 0.24572361630386128 0.9954362372494786 9 0.19444155609561467 0.8861518709950892 >10 1.1460005785171676 11.225456309051228 >50 0.1285057541922409 4.521342318959411 >100 0.08699023439343748 8.41051339956753 >500 0.006268284947537671 2.188816158370331 >1k 0.0026392778726474406 2.553897284261439 >5k 1.0996991136031003E-4 0.34119158912977704 >10k+ 3.299097340809301E-4 2.4064392578185387 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16552 0.9209456718836155 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15782 0.8781032258136309 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10880 0.6053581990148463 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6127 0.34090346372830543 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3986 0.2217792078376082 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3907 0.2173836841499085 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3655 0.20336251998154994 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3465 0.19279100731493037 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3279 0.18244205280971332 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2879 0.1601862366694616 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1988 0.11061140621705097 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 5.563954035062925E-5 0.0 0.0 2.7819770175314625E-4 0.0 10 5.563954035062925E-5 0.0 0.0 3.894767824544048E-4 0.0 11 1.112790807012585E-4 0.0 0.0 5.007558631556633E-4 0.0 12 1.112790807012585E-4 0.0 0.0 6.67674484207551E-4 0.0 13 1.112790807012585E-4 0.0 0.0 6.67674484207551E-4 0.0 14 1.112790807012585E-4 0.0 0.0 9.458721859606973E-4 0.0 15 1.112790807012585E-4 0.0 0.0 0.001112790807012585 0.0 16 1.112790807012585E-4 0.0 0.0 0.0015579071298176192 0.0 17 1.112790807012585E-4 0.0 0.0 0.0018361048315707655 0.0 18 1.112790807012585E-4 0.0 0.0 0.001947383912272024 0.0 19 2.7819770175314625E-4 0.0 0.0 0.0022812211543757994 0.0 20 2.7819770175314625E-4 0.0 0.0 0.0032270933403364967 0.0 21 2.7819770175314625E-4 0.0 0.0 0.004562442308751599 0.0 22 2.7819770175314625E-4 0.0 0.0 0.007233140245581803 0.0 23 2.7819770175314625E-4 0.0 0.0 0.009013605536801939 0.0 24 2.7819770175314625E-4 0.0 0.0 0.011239187150827109 0.0 25 2.7819770175314625E-4 0.0 0.0 0.013186571063099133 0.0 26 2.7819770175314625E-4 0.0 0.0 0.017526455210448214 0.0 27 2.7819770175314625E-4 0.0 0.0 0.04851767918574871 0.0 28 2.7819770175314625E-4 0.0 0.0 0.11061140621705096 0.0 29 3.894767824544048E-4 0.0 0.0 0.18700449511846493 0.0 30 3.894767824544048E-4 0.0 0.0 0.30156630870041057 0.0 31 3.894767824544048E-4 0.0 0.0 0.46792853434879206 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3730 0.0 29.014744 1 TATATCG 70 5.1045645E-6 21.142859 5 GTATCAA 6085 0.0 17.785538 2 TTACTCG 65 0.0015804026 17.076923 19 CGAATTA 100 5.881502E-6 16.65 15 TATACTG 270 0.0 16.444445 5 TAGCGCA 80 3.3838933E-4 16.1875 4 TTTGGAC 535 0.0 15.906542 3 TCTATAC 235 0.0 15.744681 3 ACGTTTA 120 1.93688E-6 15.416666 26 TTGGACC 830 0.0 15.3795185 4 GTATACT 175 2.240995E-9 14.8 4 CGTTTAT 140 5.9997546E-7 14.535715 1 ATAACAC 310 0.0 14.32258 3 ATTGGAC 625 0.0 14.208 3 AATGCGA 170 2.438901E-8 14.147059 20 TGGACCC 800 0.0 14.106249 5 CATCCGT 105 1.6564499E-4 14.095239 11 GTATTAG 435 0.0 14.034483 1 TAATACG 80 0.0063004442 13.875 4 >>END_MODULE