##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088110_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2036733 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.627259439504343 31.0 31.0 34.0 30.0 34.0 2 31.825010936632342 31.0 31.0 34.0 30.0 34.0 3 31.894296896058542 31.0 31.0 34.0 30.0 34.0 4 35.57920797669601 37.0 35.0 37.0 33.0 37.0 5 35.48966310262563 37.0 35.0 37.0 33.0 37.0 6 35.523587038654554 37.0 35.0 37.0 33.0 37.0 7 35.37811632648953 37.0 35.0 37.0 33.0 37.0 8 35.423253808918496 37.0 35.0 37.0 33.0 37.0 9 36.9670261148614 39.0 37.0 39.0 33.0 39.0 10 36.82586917381905 39.0 37.0 39.0 32.0 39.0 11 36.868782997084054 39.0 37.0 39.0 33.0 39.0 12 36.74317252187695 39.0 35.0 39.0 32.0 39.0 13 36.75660629056435 39.0 35.0 39.0 32.0 39.0 14 37.72743359095178 39.0 37.0 41.0 32.0 41.0 15 37.73182788318351 39.0 37.0 41.0 32.0 41.0 16 37.61663261703915 39.0 36.0 41.0 32.0 41.0 17 37.66643050414561 39.0 37.0 41.0 32.0 41.0 18 37.65655586667472 39.0 37.0 41.0 32.0 41.0 19 37.69973874827972 39.0 37.0 41.0 32.0 41.0 20 37.623929106073305 39.0 37.0 41.0 32.0 41.0 21 37.5384908085645 39.0 36.0 41.0 32.0 41.0 22 37.42996995678864 39.0 36.0 41.0 32.0 41.0 23 37.201157441844366 39.0 36.0 41.0 31.0 41.0 24 37.05294312018316 39.0 36.0 41.0 31.0 41.0 25 36.89711611684006 39.0 36.0 40.0 30.0 41.0 26 37.05378515495158 39.0 36.0 41.0 31.0 41.0 27 36.99300841101902 39.0 36.0 41.0 31.0 41.0 28 36.899077100434866 39.0 35.0 41.0 31.0 41.0 29 36.797197767208566 39.0 35.0 40.0 30.0 41.0 30 36.5410571734243 39.0 35.0 40.0 30.0 41.0 31 36.31194663218007 38.0 35.0 40.0 30.0 41.0 32 36.139901499116476 38.0 35.0 40.0 30.0 41.0 33 35.94352033378946 38.0 35.0 40.0 29.0 41.0 34 35.794331903101686 38.0 35.0 40.0 28.0 41.0 35 35.57300245049302 38.0 34.0 40.0 27.0 41.0 36 35.46457881322687 38.0 34.0 40.0 27.0 41.0 37 35.26575697452734 38.0 34.0 40.0 26.0 41.0 38 35.145712766474546 38.0 34.0 40.0 25.0 41.0 39 35.01661042463592 38.0 34.0 40.0 24.0 41.0 40 34.811968971878 38.0 33.0 40.0 24.0 41.0 41 34.63104147671786 38.0 33.0 40.0 23.0 41.0 42 34.379709564287516 38.0 33.0 40.0 22.0 41.0 43 34.02658767742262 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 8.0 14 3.0 15 7.0 16 17.0 17 62.0 18 136.0 19 312.0 20 688.0 21 1534.0 22 2874.0 23 4990.0 24 8120.0 25 12239.0 26 18286.0 27 25567.0 28 34502.0 29 44883.0 30 56590.0 31 70408.0 32 86005.0 33 106300.0 34 131199.0 35 160121.0 36 206575.0 37 286461.0 38 369977.0 39 408866.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.38708068264225 21.99718863493644 14.83989310331791 22.775837579103396 2 18.711534599773262 23.663877395809855 35.54844940402105 22.07613860039583 3 19.130686250971532 24.44674878837825 33.957175535526744 22.46538942512347 4 13.511982179303816 16.541736202045136 36.34388994531929 33.60239167333175 5 11.961116160046506 39.024408206672156 35.156498176245975 13.85797745703536 6 31.606499231858077 37.87148340013148 13.085760381945008 17.43625698606543 7 25.011574909426027 34.443886361147975 21.166986541682196 19.377552187743806 8 26.798259762079763 34.94738878390049 18.716984504105348 19.537366949914396 9 24.033047041512066 14.811072438066256 22.643223240356 38.512657280065675 10 16.320450446867607 28.069609516809518 33.38886343963593 22.22107659668695 11 32.50759917966665 22.653337477224554 24.012622174826056 20.826441168282734 12 21.14990035512755 27.81734277394239 30.714187868512955 20.318569002417107 13 31.632472199350627 21.49054392500146 26.91496627196594 19.962017603681975 14 20.13611995288533 23.700602877254898 28.226576581221003 27.936700588638768 15 21.907191566101204 29.951446753207218 26.473867708727656 21.667493971963925 16 21.28305477448443 29.09924864967573 27.076744963625572 22.540951612214265 17 21.199440476488572 27.241862335416574 27.21034126711749 24.34835592097737 18 22.97861329884673 25.480070289036412 30.41792910509134 21.123387307025514 19 22.49489746569629 24.60612166641381 31.71098028067498 21.188000587214916 20 23.576973515919857 23.97422735331533 31.806329057367854 20.642470073396954 21 22.140850077059685 25.137364593199013 32.47087369822162 20.250911631519696 22 20.439988943076976 25.537760717776948 31.908502489035133 22.113747850110936 23 21.906062306645005 25.596089423601427 32.98994026217477 19.507908007578802 24 21.74295796258027 25.59908441607221 30.21623354656698 22.44172407478054 25 21.466485788760725 26.18688851214175 31.5245542739279 20.82207142516962 26 21.184809201795225 27.03491326550903 31.231339601214298 20.548937931481444 27 19.8216948416901 27.12250452072019 30.841352302928264 22.21444833466144 28 20.530329699572796 26.342186236487553 31.05895569031385 22.0685283736258 29 20.867339999891986 26.161308330547005 30.26714841857033 22.70420325099068 30 21.213973554707465 26.317244331976745 32.15345359455559 20.315328518760193 31 22.194072566212654 26.07028019873002 31.69620171126996 20.039445523787357 32 21.48587959246499 26.043816248865216 30.73957165715879 21.730732501511 33 20.977369149515425 25.930006534975377 31.64440307099654 21.44822124451266 34 20.005567740101426 26.665841816281272 32.35004293640845 20.978547507208848 35 19.629769832373707 28.867652264680743 30.719048593998327 20.78352930894722 36 22.21945635485849 26.205054859915368 30.619575565378476 20.95591321984767 37 21.209063730984866 27.08420789568392 30.605484371294615 21.101244002036594 38 20.944522428811236 25.321973965168727 32.08078820346113 21.652715402558904 39 20.43699395060619 25.281369722982838 32.81662348476703 21.465012841643947 40 19.0099045873956 25.88498345143914 32.38711210551408 22.717999855651183 41 20.75181184769923 24.912740157890113 32.43036765251017 21.905080341900486 42 19.444767674506185 27.339420532784615 31.533490153103035 21.682321639606172 43 19.904719960839245 27.31177822522638 30.40496717046368 22.378534643470697 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 238.5 2 331.0 3 686.0 4 1041.0 5 1041.0 6 1843.5 7 2646.0 8 3087.0 9 3528.0 10 5659.5 11 7791.0 12 7791.0 13 15578.5 14 23366.0 15 38626.0 16 53886.0 17 50692.0 18 47498.0 19 47498.0 20 51899.5 21 56301.0 22 45060.5 23 33820.0 24 37417.0 25 41014.0 26 41014.0 27 43912.5 28 46811.0 29 49660.0 30 52509.0 31 57096.0 32 61683.0 33 61683.0 34 69271.0 35 76859.0 36 84498.0 37 92137.0 38 97847.0 39 103557.0 40 103557.0 41 107265.0 42 110973.0 43 116348.5 44 121724.0 45 131758.5 46 141793.0 47 141793.0 48 189858.5 49 237924.0 50 214682.0 51 191440.0 52 170152.0 53 148864.0 54 148864.0 55 128670.0 56 108476.0 57 91091.5 58 73707.0 59 66047.0 60 58387.0 61 58387.0 62 51082.0 63 43777.0 64 37904.0 65 32031.0 66 26896.0 67 21761.0 68 21761.0 69 18477.0 70 15193.0 71 12475.0 72 9757.0 73 8193.5 74 6630.0 75 6630.0 76 5213.5 77 3797.0 78 3138.0 79 2479.0 80 1930.0 81 1381.0 82 1381.0 83 1072.5 84 764.0 85 592.0 86 420.0 87 335.5 88 251.0 89 251.0 90 206.0 91 161.0 92 116.5 93 72.0 94 51.0 95 30.0 96 30.0 97 19.5 98 9.0 99 8.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2036733.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.02705684815712 #Duplication Level Percentage of deduplicated Percentage of total 1 75.82358144592321 33.382891307505325 2 12.976048607771123 11.425944594375787 3 4.617091858041403 6.098308971214568 4 2.0742747570634132 3.6529685059171286 5 1.1656101000447328 2.565919106872778 6 0.6836827597352545 1.80603238373814 7 0.46486176904635657 1.432654687263718 8 0.32334841057133407 1.13888630831883 9 0.23327002264288604 0.924317329308232 >10 1.3781594831897668 11.480189034480821 >50 0.1468654546924516 4.4869944805177875 >100 0.09901363832943776 8.358544886116015 >500 0.006816482439927944 2.0647544600237455 >1k 0.006257754371081391 4.942018925463336 >5k 7.822192963851739E-4 2.505620470228492 >10k+ 3.352368413079317E-4 3.733954548655219 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27687 1.359382894075954 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26533 1.3027235283171628 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21676 1.0642533901105349 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9983 0.49014770222704696 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7837 0.3847828851400748 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7341 0.36043015947598434 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7292 0.3580243458519109 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6757 0.3317567889360068 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6208 0.30480185669893894 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5511 0.2705803853524247 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4291 0.21068053593671826 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3416 0.167719578363978 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3411 0.16747408717784804 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3286 0.16133680752459945 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3268 0.16045303925453164 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3258 0.15996205688227177 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2771 0.13605121535321518 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2673 0.13123958810506825 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2637 0.12947205156493266 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2625 0.1288828727182208 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2499 0.12269649482774621 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2299 0.11287684738254843 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2262 0.11106021260518684 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2205 0.10826161308330547 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2113 0.1037445752585145 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2099 0.10305719993735066 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2037 0.10001310922933934 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 4.9098237225988876E-5 0.0 0.0 0.0 0.0 6 9.819647445197775E-5 0.0 0.0 0.0 0.0 7 9.819647445197775E-5 0.0 0.0 0.0 0.0 8 1.4729471167796663E-4 0.0 0.0 0.0 0.0 9 1.4729471167796663E-4 0.0 0.0 2.9458942335593326E-4 0.0 10 1.4729471167796663E-4 0.0 0.0 4.418841350338999E-4 0.0 11 1.4729471167796663E-4 0.0 0.0 7.364735583898331E-4 0.0 12 1.4729471167796663E-4 0.0 0.0 0.0015220453540056552 0.0 13 1.4729471167796663E-4 0.0 0.0 0.001620241828457633 0.0 14 1.4729471167796663E-4 0.0 0.0 0.001963929489039555 0.0 15 1.4729471167796663E-4 0.0 0.0 0.002454911861299444 0.0 16 1.4729471167796663E-4 0.0 0.0 0.003240483656915266 0.0 17 1.4729471167796663E-4 0.0 0.0 0.0041733501642090545 0.0 18 1.4729471167796663E-4 0.0 0.0 0.005008020197050865 0.0 19 1.4729471167796663E-4 0.0 0.0 0.006382770839378554 0.0 20 1.4729471167796663E-4 0.0 0.0 0.010654317478039585 0.0 21 1.4729471167796663E-4 0.0 0.0 0.01782266011303396 0.0 22 1.4729471167796663E-4 0.0 0.0 0.027347718134875805 0.0 23 1.4729471167796663E-4 0.0 0.0 0.03304311365309051 0.0 24 1.4729471167796663E-4 0.0 0.0 0.04212628753989846 0.0 25 1.4729471167796663E-4 0.0 0.0 0.04693791478804536 0.0 26 1.4729471167796663E-4 0.0 0.0 0.05611928514930528 0.0 27 1.4729471167796663E-4 0.0 0.0 0.11277865090809645 0.0 28 1.4729471167796663E-4 0.0 0.0 0.2313508938088596 0.0 29 1.4729471167796663E-4 0.0 0.0 0.3723610311218996 0.0 30 1.963929489039555E-4 0.0 0.0 0.609260025737296 0.0 31 1.963929489039555E-4 0.0 0.0 0.9156330260274665 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6685 0.0 29.970829 1 GTATTGG 575 0.0 18.660868 1 ACGTTTA 170 5.456968E-12 17.411764 26 GTATCAA 11590 0.0 17.254961 2 TAGTACT 275 0.0 16.818182 4 CTGTGCG 220 0.0 15.977273 9 CGGTATA 105 9.350102E-6 15.857144 28 TTAGTAC 95 7.063956E-5 15.578948 3 GTCGTCA 120 1.9371873E-6 15.416667 24 CATTGCG 135 3.97622E-7 15.074075 29 TGGACCC 1180 0.0 15.050847 5 GGACCCT 1145 0.0 15.026201 6 TAATACT 395 0.0 14.987342 4 TTGGACC 1225 0.0 14.95102 4 CTAATAC 335 0.0 14.910448 3 ATTGGAC 745 0.0 14.899328 3 TGCCGGT 100 1.09402215E-4 14.8 19 AGTACTG 505 0.0 14.653466 5 ATAGTAC 230 1.8189894E-12 14.478261 3 GACCCTC 1140 0.0 14.442982 7 >>END_MODULE