##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088107_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1311486 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.428341591141653 31.0 31.0 34.0 30.0 34.0 2 31.645695036012583 31.0 31.0 34.0 30.0 34.0 3 31.71659933846034 31.0 31.0 34.0 30.0 34.0 4 35.44927280962206 37.0 35.0 37.0 33.0 37.0 5 35.31333083235353 37.0 35.0 37.0 33.0 37.0 6 35.33539511668443 37.0 35.0 37.0 33.0 37.0 7 35.22807029583236 37.0 35.0 37.0 32.0 37.0 8 35.24594391400289 37.0 35.0 37.0 32.0 37.0 9 36.78221727109553 39.0 37.0 39.0 32.0 39.0 10 36.58320561561465 38.0 35.0 39.0 32.0 39.0 11 36.64195119124413 39.0 35.0 39.0 32.0 39.0 12 36.5212850156235 38.0 35.0 39.0 32.0 39.0 13 36.55024300678772 38.0 35.0 39.0 32.0 39.0 14 37.538573801016554 39.0 36.0 41.0 32.0 41.0 15 37.554924718982896 39.0 36.0 41.0 32.0 41.0 16 37.425707174914564 39.0 36.0 41.0 32.0 41.0 17 37.40229708895101 39.0 36.0 41.0 32.0 41.0 18 37.383881337658195 39.0 36.0 41.0 32.0 41.0 19 37.41047254793418 39.0 36.0 41.0 32.0 41.0 20 37.33010874687187 39.0 36.0 40.0 31.0 41.0 21 37.23960682767487 39.0 36.0 40.0 31.0 41.0 22 37.112837651335965 39.0 36.0 40.0 31.0 41.0 23 36.91517332247542 39.0 36.0 40.0 31.0 41.0 24 36.76012553698629 39.0 35.0 40.0 30.0 41.0 25 36.626151556326185 39.0 35.0 40.0 30.0 41.0 26 36.79116666132921 39.0 36.0 40.0 30.0 41.0 27 36.698951418467296 39.0 35.0 40.0 30.0 41.0 28 36.63606397628339 39.0 35.0 40.0 30.0 41.0 29 36.55510466752981 39.0 35.0 40.0 30.0 41.0 30 36.34690191126707 38.0 35.0 40.0 30.0 41.0 31 36.184013401591784 38.0 35.0 40.0 30.0 41.0 32 36.01030434179244 38.0 35.0 40.0 29.0 41.0 33 35.83956062054799 38.0 35.0 40.0 28.0 41.0 34 35.7103118142321 38.0 34.0 40.0 27.0 41.0 35 35.537986680757555 38.0 34.0 40.0 27.0 41.0 36 35.44612676002641 38.0 34.0 40.0 27.0 41.0 37 35.27819282859291 38.0 34.0 40.0 26.0 41.0 38 35.197174045319585 38.0 34.0 40.0 25.0 41.0 39 35.108598948063495 38.0 34.0 40.0 25.0 41.0 40 34.95554279649192 38.0 33.0 40.0 24.0 41.0 41 34.81312267153443 38.0 33.0 40.0 24.0 41.0 42 34.65727731748566 38.0 33.0 40.0 23.0 41.0 43 34.326667612159035 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 2.0 15 3.0 16 22.0 17 65.0 18 117.0 19 282.0 20 566.0 21 1183.0 22 2079.0 23 3667.0 24 5774.0 25 8722.0 26 12338.0 27 17503.0 28 23427.0 29 30280.0 30 37954.0 31 47365.0 32 58097.0 33 70772.0 34 87036.0 35 106633.0 36 136342.0 37 181408.0 38 249220.0 39 230626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.013683714504005 22.958765857965695 14.667102813144783 23.360447614385514 2 19.20066245465068 24.078640564977437 34.56094842034151 22.15974856003038 3 19.487131391414014 25.249678608845233 32.80706008298983 22.45612991675092 4 14.568969855568417 18.065919117703125 36.180714090733716 31.18439693599474 5 12.742568353760545 38.834802658968535 35.02789964971033 13.394729337560598 6 31.390194024183256 38.57715598946538 14.459475739733401 15.573174246617958 7 25.39752616497622 33.39364659630373 22.356395722104544 18.852431516615503 8 25.929136872219754 35.73442644450646 19.497958803982655 18.838477879291123 9 24.71776290406455 14.976217817041126 22.030048357359515 38.27597092153481 10 16.308599558058567 28.603584026058986 33.93699970872735 21.15081670715509 11 33.14034614170491 23.517292597862273 23.15914923986989 20.183212020562934 12 20.159803459587064 27.87059869491554 31.134453589287265 20.835144256210132 13 30.225408429826928 22.09752906245282 26.19044351216864 21.48661899555161 14 20.1756633315186 23.668418877517563 28.011507557076477 28.144410233887363 15 22.85720167809645 30.328421347997615 25.088868657385593 21.725508316520344 16 21.74914562564907 28.924898931441128 27.02087555642988 22.305079886479916 17 21.36530622515223 28.175138735754707 27.54745380431053 22.91210123478253 18 22.146709915317434 27.035134191291405 29.324521954485217 21.493633938905944 19 22.328107200534355 26.431391566513103 30.546265838903352 20.694235394049194 20 22.72384150497985 26.147591358199783 30.23623584239557 20.8923312944248 21 21.887157011207133 26.733872873976544 30.555797011939127 20.823173102877192 22 21.449409296019933 26.858235619747372 30.201847370082486 21.49050771415021 23 21.935499120844597 26.79616862093839 30.522933527311768 20.745398730905247 24 21.68059742917576 27.03566793698141 29.43912477906741 21.844609854775424 25 21.68296116008863 27.285308421134502 29.987662849622488 21.04406756915438 26 21.367669956065104 27.7623245692291 29.795285653068355 21.07471982163744 27 20.98672803217114 27.653592947236948 29.61160088632284 21.748078134269065 28 21.1031608419762 27.650847969402648 29.596198510697025 21.649792677924125 29 21.307890438784707 27.344477943340607 29.544196430613823 21.803435187260863 30 21.520854969096124 27.57436983696357 30.255984432925704 20.648790761014606 31 21.992457410906407 27.249852457441403 30.04256240630857 20.715127725343617 32 21.584065708669403 27.275472250561577 29.65437679090741 21.48608524986161 33 21.350361345832134 27.23490757812131 29.884421183298944 21.530309892747614 34 20.936022191620804 27.04009040127001 30.696172128410065 21.327715278699124 35 20.83499175744156 27.9477630718132 29.947403174719362 21.26984199602588 36 21.739766951381867 26.980463382758185 29.87542375595317 21.404345909906777 37 21.289819334708874 26.958579809468038 30.144431583714958 21.60716927210813 38 21.093400920787563 26.38152446918991 30.831819783055252 21.693254826967273 39 20.73037760220086 26.19692470983297 31.556036435005787 21.516661252960382 40 20.060221763709258 26.294371422950757 31.341699415777217 22.303707397562764 41 20.705444053539267 25.666838990275153 31.45843722311942 22.169279733066155 42 19.89666683441531 27.111154827424766 30.708600778048716 22.2835775601112 43 20.185194504554378 26.68728450017766 30.50966613444596 22.617854860822 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 160.0 1 207.5 2 255.0 3 416.5 4 578.0 5 578.0 6 1050.0 7 1522.0 8 1730.0 9 1938.0 10 3134.5 11 4331.0 12 4331.0 13 8153.0 14 11975.0 15 18811.5 16 25648.0 17 23941.0 18 22234.0 19 22234.0 20 25957.5 21 29681.0 22 26026.0 23 22371.0 24 26070.5 25 29770.0 26 29770.0 27 33155.0 28 36540.0 29 38771.0 30 41002.0 31 45810.5 32 50619.0 33 50619.0 34 55624.0 35 60629.0 36 66087.5 37 71546.0 38 74179.0 39 76812.0 40 76812.0 41 78940.5 42 81069.0 43 83204.0 44 85339.0 45 87748.0 46 90157.0 47 90157.0 48 103934.0 49 117711.0 50 108977.5 51 100244.0 52 90844.5 53 81445.0 54 81445.0 55 74387.0 56 67329.0 57 60426.0 58 53523.0 59 48447.0 60 43371.0 61 43371.0 62 38159.5 63 32948.0 64 28315.5 65 23683.0 66 19799.0 67 15915.0 68 15915.0 69 13581.0 70 11247.0 71 9474.0 72 7701.0 73 6366.5 74 5032.0 75 5032.0 76 4101.5 77 3171.0 78 2499.5 79 1828.0 80 1446.0 81 1064.0 82 1064.0 83 785.5 84 507.0 85 398.0 86 289.0 87 227.5 88 166.0 89 166.0 90 130.0 91 94.0 92 60.0 93 26.0 94 19.5 95 13.0 96 13.0 97 7.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1311486.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.23961523592695 #Duplication Level Percentage of deduplicated Percentage of total 1 76.71396781927959 40.07508162100448 2 12.87758212785567 13.454398710564593 3 4.499745447420442 7.051949124985734 4 2.0266157548168606 4.234785090508019 5 1.085087160174961 2.83422678724923 6 0.617694796280679 1.9360883094562173 7 0.39727420959786386 1.4527416296784583 8 0.26190964964846314 1.0945647459369716 9 0.19634026535554666 0.92310659257442 >10 1.1337734154962282 11.294449032879589 >50 0.11857251925922586 4.302018599470162 >100 0.0652885970431913 5.990275208910723 >500 0.00424521179449055 1.443405294897414 >1k 0.0014638661360312243 1.475905811471263 >5k 1.4638661360312245E-4 0.6168980404735067 >10k+ 2.927732272062449E-4 1.8201053999392505 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11956 0.9116376385260688 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11845 0.9031739568702982 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8067 0.6151037830369519 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4446 0.3390047625365425 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2362 0.1801010456840561 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2161 0.1647749194425255 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1942 0.1480763042838429 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1759 0.13412266695946432 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1562 0.11910153825507859 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1451 0.11063785659930796 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1367 0.10423290831926531 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.5249876857244377E-4 0.0 11 0.0 0.0 0.0 2.2874815285866567E-4 0.0 12 0.0 0.0 0.0 4.5749630571733133E-4 0.0 13 0.0 0.0 0.0 4.5749630571733133E-4 0.0 14 0.0 0.0 0.0 5.337456900035532E-4 0.0 15 0.0 0.0 0.0 5.337456900035532E-4 0.0 16 0.0 0.0 0.0 6.099950742897751E-4 0.0 17 0.0 0.0 0.0 7.624938428622189E-4 0.0 18 0.0 0.0 0.0 9.149926114346627E-4 0.0 19 0.0 0.0 0.0 0.0012962395328657722 0.0 20 0.0 0.0 0.0 0.0019062346071555471 0.0 21 0.0 0.0 0.0 0.003583721061452429 0.0 22 0.0 0.0 0.0 0.005947451974325307 0.0 23 0.0 0.0 0.0 0.007777437197194633 0.0 24 0.0 0.0 0.0 0.011513657027219504 0.0 25 0.0 0.0 0.0 0.015097378088671934 0.0 26 0.0 0.0 0.0 0.023637309128728787 0.0 27 0.0 0.0 0.0 0.07708812751337032 0.0 28 0.0 0.0 0.0 0.1723998578711477 0.0 29 0.0 0.0 0.0 0.28639268737904944 0.0 30 7.624938428622188E-5 0.0 0.0 0.45902129340305575 0.0 31 7.624938428622188E-5 0.0 0.0 0.7045443108046903 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3040 0.0 27.932566 1 GGTATCG 55 5.143624E-4 20.181818 35 TCACGTT 125 4.129106E-10 19.240002 24 GTGTTAC 80 1.6169532E-5 18.5 1 CGAACTA 130 6.9667294E-10 18.5 24 CGCTTAG 50 0.0070353993 18.499998 25 GTATCAA 4720 0.0 17.990465 2 TCTAGCA 125 8.581992E-9 17.760002 3 CGTAAGC 95 3.6071706E-6 17.526316 2 GACCGTG 85 2.7235905E-5 17.411764 7 GCGAACT 150 2.5102054E-10 17.266666 23 ACGTTTA 140 1.869921E-9 17.178572 26 CGCCGGA 65 0.0015800948 17.076923 14 TAAGACT 290 0.0 16.586206 4 CGATCGT 95 7.060886E-5 15.578948 13 TATACCG 75 0.004104816 14.8 5 GTAAGAC 100 1.0935507E-4 14.799999 3 TCCGACG 140 5.9961894E-7 14.535715 23 ACTACCC 115 2.2102036E-5 14.478261 3 CTCTTAG 90 8.275111E-4 14.388888 1 >>END_MODULE