##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088106_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1623982 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.132203435752366 31.0 31.0 33.0 30.0 34.0 2 31.33581960883803 31.0 31.0 34.0 30.0 34.0 3 31.333092977631527 31.0 31.0 34.0 28.0 34.0 4 35.10245125869622 35.0 35.0 37.0 32.0 37.0 5 34.99482321848395 35.0 35.0 37.0 32.0 37.0 6 35.09409525475036 36.0 35.0 37.0 32.0 37.0 7 34.90426925914203 36.0 35.0 37.0 32.0 37.0 8 35.00818358824174 36.0 35.0 37.0 32.0 37.0 9 36.42060010517358 38.0 35.0 39.0 32.0 39.0 10 36.21993224062828 38.0 35.0 39.0 32.0 39.0 11 36.32481456075252 38.0 35.0 39.0 32.0 39.0 12 36.146901258757794 38.0 35.0 39.0 31.0 39.0 13 36.21563908959582 38.0 35.0 39.0 32.0 39.0 14 36.96643682011254 39.0 36.0 40.0 31.0 41.0 15 37.01316455477955 38.0 36.0 40.0 31.0 41.0 16 36.83534546565171 38.0 36.0 40.0 31.0 41.0 17 36.97461363488019 38.0 36.0 40.0 31.0 41.0 18 36.95814670359647 38.0 36.0 40.0 31.0 41.0 19 37.05055290021687 39.0 36.0 40.0 31.0 41.0 20 36.98355092605706 39.0 36.0 40.0 31.0 41.0 21 36.907287149734415 39.0 36.0 40.0 31.0 41.0 22 36.795213247437474 39.0 36.0 40.0 30.0 41.0 23 36.552418684443545 38.0 35.0 40.0 30.0 41.0 24 36.38366004056695 38.0 35.0 40.0 30.0 41.0 25 36.22061266688917 38.0 35.0 40.0 30.0 41.0 26 36.30976759594626 38.0 35.0 40.0 30.0 41.0 27 36.20115801776128 38.0 35.0 40.0 30.0 41.0 28 36.06784865842109 38.0 35.0 40.0 30.0 41.0 29 35.94568104818896 38.0 35.0 40.0 29.0 41.0 30 35.62320087291608 38.0 34.0 40.0 27.0 41.0 31 35.30007105990091 38.0 34.0 40.0 27.0 41.0 32 35.122840031478184 37.0 34.0 40.0 27.0 41.0 33 34.8787018575329 37.0 33.0 40.0 25.0 41.0 34 34.69122009973017 37.0 33.0 40.0 25.0 41.0 35 34.437161865094566 37.0 33.0 40.0 24.0 41.0 36 34.29589428946873 37.0 33.0 40.0 24.0 41.0 37 34.0599132256392 37.0 33.0 40.0 23.0 41.0 38 33.86678115890447 37.0 33.0 40.0 22.0 41.0 39 33.67996997503667 37.0 33.0 40.0 21.0 41.0 40 33.38691992891547 37.0 32.0 40.0 18.0 41.0 41 33.13379335485246 37.0 31.0 40.0 17.0 41.0 42 32.793184284062264 36.0 31.0 40.0 15.0 41.0 43 32.41256368605071 36.0 30.0 40.0 14.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 5.0 15 14.0 16 29.0 17 73.0 18 229.0 19 509.0 20 1151.0 21 2097.0 22 3811.0 23 6439.0 24 10059.0 25 15063.0 26 21410.0 27 29159.0 28 38141.0 29 48221.0 30 59028.0 31 70510.0 32 85098.0 33 101777.0 34 121232.0 35 145853.0 36 185428.0 37 239759.0 38 272924.0 39 165961.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.252517577165264 24.196019414008283 17.244218224093615 20.307244784732838 2 20.02509880035616 25.851148596474594 33.77543593463474 20.3483166685345 3 20.572764969069855 24.626627635035366 35.304332190874035 19.496275205020748 4 14.601208634085847 18.229389241998987 34.660790575265 32.508611548650165 5 10.937313344606036 40.99238784666333 34.40604637243516 13.664252436295477 6 30.838272837999437 38.31914393139825 12.238374563264864 18.604208667337446 7 23.144899389278944 36.25403483536147 20.497517829631118 20.10354794572846 8 27.52376565750113 35.324221573884444 18.120644194332204 19.03136857428223 9 23.38751291578355 14.713155687686195 23.363374717207456 38.5359566793228 10 16.608558469244116 29.629761906228026 32.358733040144536 21.402946584383326 11 31.807926442534463 22.808750343291983 24.192632676963168 21.190690537210386 12 20.47177862808824 29.578283503142277 31.02312710362553 18.926810765143948 13 33.1422392612726 21.571667666267235 27.605786271030098 17.680306801430064 14 19.11437442040614 24.770717902045714 29.806549579983027 26.308358097565122 15 21.154791124532167 30.89597052184076 27.664592341540732 20.28464601208634 16 19.555635468866033 29.35549778261089 28.98517348098686 22.10369326753622 17 20.612112695830373 27.517731107857106 28.398590624772936 23.471565571539585 18 22.284360294633807 24.947628729875085 32.33619584453522 20.431815130955886 19 21.524191770598442 24.018123353583967 34.77440020886931 19.68328466694828 20 22.609240742816112 23.25930952436665 34.695396870162355 19.436052862654883 21 21.221048016542056 24.402671950797483 36.047567029683826 18.328713002976635 22 18.714677872045378 24.897381867533014 35.150820637174554 21.237119623247054 23 20.83508314747331 25.062593058297445 36.356067985975216 17.746255808254034 24 20.181381320728924 25.069058647201754 33.366625984770764 21.382934047298555 25 19.91672321491248 26.175782736508165 34.4365270058412 19.470967042738156 26 19.745723782652764 27.184599336692155 34.09009459464452 18.97958228601056 27 18.04533547785628 27.060275298617842 33.775928550932214 21.11846067259366 28 19.148057059745735 26.497830640980013 33.69883410037796 20.655278198896294 29 19.376384713623672 25.56703214690803 32.66760345865902 22.38897968080927 30 19.792214445726618 26.303247203478858 35.31991118128157 18.584627169512963 31 21.140751560054238 26.024734264296036 34.501059740809936 18.333454434839794 32 20.471470742902323 25.86229404020488 33.36791910255163 20.29831611434117 33 19.77226348567903 25.920792225529592 34.0591829219782 20.24776136681318 34 18.42440371876043 27.003624424408645 35.10937929114978 19.46259256568115 35 17.707647005939723 29.69632668342383 33.52099961699083 19.07502669364562 36 21.28982956707648 26.065251954763045 33.13934514052496 19.505573337635514 37 20.04683549448208 27.820012783392915 32.720990749897474 19.412160972227525 38 19.954285207594666 25.275772761028136 34.523535359382066 20.246406671995132 39 19.14325405084539 25.143997901454572 35.54700729441582 20.16574075328421 40 17.402840671879368 25.983416072345626 34.584065586933846 22.029677668841156 41 19.870602014061735 24.91998064017951 34.49071479856304 20.71870254719572 42 18.446078835849168 27.84889241383217 33.109357123416395 20.595671626902266 43 18.774777060336874 28.037810763912407 31.749612988321303 21.43779918742942 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 147.0 1 218.5 2 290.0 3 465.5 4 641.0 5 641.0 6 1420.5 7 2200.0 8 2693.5 9 3187.0 10 5567.5 11 7948.0 12 7948.0 13 16896.0 14 25844.0 15 45335.0 16 64826.0 17 58175.0 18 51524.0 19 51524.0 20 57714.5 21 63905.0 22 49305.5 23 34706.0 24 37377.5 25 40049.0 26 40049.0 27 41500.5 28 42952.0 29 43281.0 30 43610.0 31 46704.0 32 49798.0 33 49798.0 34 54384.0 35 58970.0 36 64579.0 37 70188.0 38 72275.0 39 74362.0 40 74362.0 41 76484.5 42 78607.0 43 82336.5 44 86066.0 45 97755.0 46 109444.0 47 109444.0 48 160218.0 49 210992.0 50 186663.5 51 162335.0 52 139106.5 53 115878.0 54 115878.0 55 95535.5 56 75193.0 57 60209.0 58 45225.0 59 39101.5 60 32978.0 61 32978.0 62 28144.0 63 23310.0 64 20081.5 65 16853.0 66 14162.5 67 11472.0 68 11472.0 69 9663.5 70 7855.0 71 6387.0 72 4919.0 73 4146.0 74 3373.0 75 3373.0 76 2694.0 77 2015.0 78 1539.5 79 1064.0 80 814.5 81 565.0 82 565.0 83 459.0 84 353.0 85 261.5 86 170.0 87 127.5 88 85.0 89 85.0 90 70.0 91 55.0 92 37.0 93 19.0 94 11.0 95 3.0 96 3.0 97 3.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1623982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.33548785139864 #Duplication Level Percentage of deduplicated Percentage of total 1 76.06631253739592 30.68171825252825 2 12.561512691878054 10.13349485156874 3 4.58078495617043 5.5430458784844605 4 2.1386729328032197 3.4505766439679744 5 1.1456836040442797 2.3105853546237323 6 0.7350767254121726 1.7789806996625148 7 0.44204285751897204 1.2481010016477825 8 0.3280830954700421 1.0586713369264915 9 0.23336632873768132 0.8471650245951821 >10 1.480946870680066 11.608785661221921 >50 0.15960693757216382 4.493725496070036 >100 0.10740810021497321 8.267206352392309 >500 0.009639170241981633 2.6115059740494537 >1k 0.009333164837474282 6.9966216982692275 >5k 9.180162135220604E-4 2.6730969316565374 >10k+ 6.12010809014707E-4 6.296718842335423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34821 2.1441740117809185 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33038 2.034382154482008 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22874 1.40851314854475 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11297 0.6956357890666276 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9093 0.5599199991132907 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8267 0.5090573663993813 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7706 0.47451264853920794 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6350 0.3910141861178264 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6330 0.38978264537414825 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5568 0.3428609430400091 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4412 0.2716778880554095 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4087 0.25166535097063886 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3774 0.2323917383320751 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3576 0.220199484969661 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3499 0.21545805310649993 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3025 0.18627053748132674 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2937 0.1808517582091427 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2877 0.17715713597810812 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2796 0.17216939596621145 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2779 0.17112258633408498 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2746 0.16909054410701596 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2689 0.16558065298753313 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2433 0.14981693146845224 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2293 0.14119614626270488 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2233 0.1375015240316703 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2094 0.12894231586310687 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 2086 0.12844969956563557 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2066 0.1272181588219574 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2046 0.12598661807827918 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 2018 0.12426246103712972 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1945 0.11976733732270432 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1917 0.11804318028155485 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 1890 0.11638060027758929 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1862 0.11465644323643981 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1835 0.11299386323247425 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1800 0.11083866693103742 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1773 0.10917608692707186 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 1709 0.10523515654730163 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 1703 0.10486569432419818 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1659 0.10215630468810614 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 6.157703718390968E-5 0.0 11 0.0 0.0 0.0 3.0788518591954835E-4 0.0 12 0.0 0.0 0.0 4.926162974712774E-4 0.0 13 0.0 0.0 0.0 6.157703718390967E-4 0.0 14 0.0 0.0 0.0 7.389244462069161E-4 0.0 15 0.0 0.0 0.0 0.001354694818046013 0.0 16 0.0 0.0 0.0 0.002463081487356387 0.0 17 0.0 0.0 0.0 0.0031404288963793933 0.0 18 0.0 0.0 0.0 0.003940930379770219 0.0 19 6.157703718390968E-5 0.0 0.0 0.005357202235000142 0.0 20 6.157703718390968E-5 0.0 0.0 0.008867093354482993 0.0 21 6.157703718390968E-5 0.0 0.0 0.013608525217644038 0.0 22 6.157703718390968E-5 0.0 0.0 0.023460851167069585 0.0 23 6.157703718390968E-5 0.0 0.0 0.027524935621207624 0.0 24 6.157703718390968E-5 0.0 0.0 0.03368263933959859 0.0 25 6.157703718390968E-5 0.0 0.0 0.038608802314311366 0.0 26 6.157703718390968E-5 0.0 0.0 0.048399551226553005 0.0 27 6.157703718390968E-5 0.0 0.0 0.11299386323247425 0.0 28 6.157703718390968E-5 0.0 0.0 0.23664055389776487 0.0 29 6.157703718390968E-5 0.0 0.0 0.39292307427052764 0.0 30 6.157703718390968E-5 0.0 0.0 0.6613989563923738 0.0 31 6.157703718390968E-5 0.0 0.0 0.9576460822841633 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6925 0.0 31.576897 1 GGTCTAG 45 0.0038264787 20.555555 1 CGCTTAT 45 0.0038264787 20.555555 1 ATGCGAT 55 5.144352E-4 20.181818 28 TGCGATT 75 9.269639E-6 19.733334 29 GTATCAA 11515 0.0 19.006079 2 GTATTGG 370 0.0 19.000002 1 CGCGCTA 50 0.007036104 18.499998 16 TTATGCG 125 8.58563E-9 17.76 4 GTACACT 65 0.001580314 17.076923 4 CGACCGC 130 1.3942554E-8 17.076923 10 GCGCTAC 65 0.001580314 17.076923 17 TATACCG 120 1.0419535E-7 16.958332 5 CTAGTAC 165 5.4569682E-11 16.818182 3 GTATACT 110 7.812487E-7 16.818182 4 TAGCACC 100 5.880798E-6 16.65 4 TTTTTAC 1205 0.0 16.580914 1 ATTGGAC 480 0.0 16.572916 3 GGACCCT 850 0.0 16.541178 6 GTGCGCG 90 4.4477765E-5 16.444445 11 >>END_MODULE